RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 TRIP11Q15643 1979 aa13.32□□□□□ -0.28
SHMT2-221ENST00000555773 ANK1P16157 1881 aa13.32□□□□□ -0.28
SHMT2-221ENST00000555773 TMEM265A0A087WTH1 108 aa13.32□□□□□ -0.28
SHMT2-221ENST00000555773 EPHB6O15197 1021 aa13.32□□□□□ -0.28
SHMT2-221ENST00000555773 ACO1P21399 889 aaKnown RBP13.32□□□□□ -0.28
SHMT2-221ENST00000555773 PCSK1P29120 753 aa13.32□□□□□ -0.28
SHMT2-221ENST00000555773 TKTP29401 623 aaKnown RBP13.32□□□□□ -0.28
SHMT2-221ENST00000555773 CDH8P55286 799 aa13.32□□□□□ -0.28
SHMT2-221ENST00000555773 APBA1Q02410 837 aa13.32□□□□□ -0.28
SHMT2-221ENST00000555773 DSG1Q02413 1049 aa13.32□□□□□ -0.28
SHMT2-221ENST00000555773 RAPGEF1Q13905 1077 aa13.32□□□□□ -0.28
SHMT2-221ENST00000555773 DRAP1Q14919 205 aaPredicted RBP13.32□□□□□ -0.28
SHMT2-221ENST00000555773 PTPN21Q16825 1174 aa13.32□□□□□ -0.28
SHMT2-221ENST00000555773 KIAA0319Q5VV43 1072 aa13.32□□□□□ -0.28
SHMT2-221ENST00000555773 OVOS1Q6IE37 1185 aa13.32□□□□□ -0.28
SHMT2-221ENST00000555773 PDE12Q6L8Q7 609 aaKnown RBP13.32□□□□□ -0.28
SHMT2-221ENST00000555773 SCARA5Q6ZMJ2 495 aa13.32□□□□□ -0.28
SHMT2-221ENST00000555773 CEP57Q86XR8 500 aa13.32□□□□□ -0.28
SHMT2-221ENST00000555773 UBR7Q8N806 425 aa13.32□□□□□ -0.28
SHMT2-221ENST00000555773 OR6B3Q8NGW1 331 aa13.32□□□□□ -0.28
SHMT2-221ENST00000555773 KBTBD7Q8WVZ9 684 aa13.32□□□□□ -0.28
SHMT2-221ENST00000555773 PIK3R5Q8WYR1 880 aa13.32□□□□□ -0.28
SHMT2-221ENST00000555773 SHC3Q92529 594 aa13.32□□□□□ -0.28
SHMT2-221ENST00000555773 SPAG5Q96R06 1193 aa13.32□□□□□ -0.28
SHMT2-221ENST00000555773 ACBD6Q9BR61 282 aa13.32□□□□□ -0.28
SHMT2-221ENST00000555773 MRPL45Q9BRJ2 306 aaKnown RBP13.32□□□□□ -0.28
SHMT2-221ENST00000555773 VN1R3Q9BXE9 311 aa13.32□□□□□ -0.28
SHMT2-221ENST00000555773 TTYH3Q9C0H2 523 aa13.32□□□□□ -0.28
SHMT2-221ENST00000555773 SDCBP2Q9H190 292 aa13.32□□□□□ -0.28
SHMT2-221ENST00000555773 KIAA1257Q9ULG3 409 aa13.32□□□□□ -0.28
SHMT2-221ENST00000555773 STXBP5LQ9Y2K9 1186 aa13.32□□□□□ -0.28
SHMT2-221ENST00000555773 LUC7L2Q9Y383 392 aaKnown RBP13.32□□□□□ -0.28
SHMT2-221ENST00000555773 TIMM13Q9Y5L4 95 aaPredicted RBP13.32□□□□□ -0.28
SHMT2-221ENST00000555773 BACE2Q9Y5Z0 518 aa13.32□□□□□ -0.28
SHMT2-221ENST00000555773 FHOD1Q9Y613 1164 aa13.32□□□□□ -0.28
SHMT2-221ENST00000555773 OR6C75A6NL08 312 aa13.31□□□□□ -0.28
SHMT2-221ENST00000555773 A8MXQ7 604 aa13.31□□□□□ -0.28
SHMT2-221ENST00000555773 FOXN3O00409 490 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-221ENST00000555773 CILPO75339 1184 aa13.31□□□□□ -0.28
SHMT2-221ENST00000555773 URODP06132 367 aa13.31□□□□□ -0.28
SHMT2-221ENST00000555773 CCDC172P0C7W6 258 aa13.31□□□□□ -0.28
SHMT2-221ENST00000555773 CTSAP10619 480 aa13.31□□□□□ -0.28
SHMT2-221ENST00000555773 STAT1P42224 750 aa13.31□□□□□ -0.28
SHMT2-221ENST00000555773 GLUD2P49448 558 aa13.31□□□□□ -0.28
SHMT2-221ENST00000555773 NDST1P52848 882 aa13.31□□□□□ -0.28
SHMT2-221ENST00000555773 BPIFB4P59827 614 aa13.31□□□□□ -0.28
SHMT2-221ENST00000555773 ZBED6P86452 979 aa13.31□□□□□ -0.28
SHMT2-221ENST00000555773 CREMQ03060 361 aa13.31□□□□□ -0.28
SHMT2-221ENST00000555773 TBX2Q13207 712 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-221ENST00000555773 GPM6BQ13491 265 aa13.31□□□□□ -0.28
SHMT2-221ENST00000555773 ARHGAP44Q17R89 818 aa13.31□□□□□ -0.28
SHMT2-221ENST00000555773 VARS2Q5ST30 1063 aaKnown RBP13.31□□□□□ -0.28
SHMT2-221ENST00000555773 TMC6Q7Z403 805 aa13.31□□□□□ -0.28
SHMT2-221ENST00000555773 DRC7Q8IY82 874 aa13.31□□□□□ -0.28
SHMT2-221ENST00000555773 CRYBG2Q8N1P7 616 aa13.31□□□□□ -0.28
SHMT2-221ENST00000555773 LNX1Q8TBB1 728 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-221ENST00000555773 POF1BQ8WVV4 589 aa13.31□□□□□ -0.28
SHMT2-221ENST00000555773 KAT5Q92993 513 aa13.31□□□□□ -0.28
SHMT2-221ENST00000555773 TNIP3Q96KP6 325 aa13.31□□□□□ -0.28
SHMT2-221ENST00000555773 ARID3AQ99856 593 aa13.31□□□□□ -0.28
SHMT2-221ENST00000555773 NT5C1AQ9BXI3 368 aa13.31□□□□□ -0.28
SHMT2-221ENST00000555773 LMAN2LQ9H0V9 348 aa13.31□□□□□ -0.28
SHMT2-221ENST00000555773 ALG13Q9NP73 1137 aaKnown RBP13.31□□□□□ -0.28
SHMT2-221ENST00000555773 NGRNQ9NPE2 291 aaKnown RBP13.31□□□□□ -0.28
SHMT2-221ENST00000555773 NLRC4Q9NPP4 1024 aa13.31□□□□□ -0.28
SHMT2-221ENST00000555773 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.31□□□□□ -0.28
SHMT2-221ENST00000555773 MRPL17Q9NRX2 175 aaKnown RBP13.31□□□□□ -0.28
SHMT2-221ENST00000555773 DDX43Q9NXZ2 648 aaKnown RBP13.31□□□□□ -0.28
SHMT2-221ENST00000555773 IMPACTQ9P2X3 320 aa13.31□□□□□ -0.28
SHMT2-221ENST00000555773 CDH9Q9ULB4 789 aa13.31□□□□□ -0.28
SHMT2-221ENST00000555773 MTUS1Q9ULD2 1270 aa13.31□□□□□ -0.28
SHMT2-221ENST00000555773 PCDHB4Q9Y5E5 795 aa13.31□□□□□ -0.28
SHMT2-221ENST00000555773 IRAK3Q9Y616 596 aa13.31□□□□□ -0.28
SHMT2-221ENST00000555773 F8VZ95 297 aa13.3□□□□□ -0.28
SHMT2-221ENST00000555773 TBC1D4O60343 1298 aa13.3□□□□□ -0.28
SHMT2-221ENST00000555773 LILRB3O75022 631 aa13.3□□□□□ -0.28
SHMT2-221ENST00000555773 CXCL14O95715 111 aa13.3□□□□□ -0.28
SHMT2-221ENST00000555773 PAEPP09466 180 aa13.3□□□□□ -0.28
SHMT2-221ENST00000555773 CD58P19256 250 aa13.3□□□□□ -0.28
SHMT2-221ENST00000555773 RAP1GAPP47736 663 aa13.3□□□□□ -0.28
SHMT2-221ENST00000555773 JAM2P57087 298 aa13.3□□□□□ -0.28
SHMT2-221ENST00000555773 CTXN3Q4LDR2 81 aa13.3□□□□□ -0.28
SHMT2-221ENST00000555773 RTP2Q5QGT7 225 aa13.3□□□□□ -0.28
SHMT2-221ENST00000555773 ZNF280DQ6N043 979 aa13.3□□□□□ -0.28
SHMT2-221ENST00000555773 TMEM270Q6UE05 265 aa13.3□□□□□ -0.28
SHMT2-221ENST00000555773 TMC7Q7Z402 723 aa13.3□□□□□ -0.28
SHMT2-221ENST00000555773 FAM71AQ8IYT1 594 aa13.3□□□□□ -0.28
SHMT2-221ENST00000555773 WHAMMQ8TF30 809 aa13.3□□□□□ -0.28
SHMT2-221ENST00000555773 CPLX3Q8WVH0 158 aa13.3□□□□□ -0.28
SHMT2-221ENST00000555773 ARNTL2Q8WYA1 636 aa13.3□□□□□ -0.28
SHMT2-221ENST00000555773 RIN2Q8WYP3 895 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-221ENST00000555773 BAP1Q92560 729 aa13.3□□□□□ -0.28
SHMT2-221ENST00000555773 SYN2Q92777 582 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-221ENST00000555773 TMEM176AQ96HP8 235 aa13.3□□□□□ -0.28
SHMT2-221ENST00000555773 ZBP1Q9H171 429 aa13.3□□□□□ -0.28
SHMT2-221ENST00000555773 RXFP1Q9HBX9 757 aa13.3□□□□□ -0.28
SHMT2-221ENST00000555773 TLR9Q9NR96 1032 aa13.3□□□□□ -0.28
SHMT2-221ENST00000555773 FNIP2Q9P278 1114 aa13.3□□□□□ -0.28
SHMT2-221ENST00000555773 TDRD15B5MCY1 1934 aaKnown RBP13.29□□□□□ -0.28
SHMT2-221ENST00000555773 GOLGA6L6A8MZA4 724 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms