RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 GDAP1Q8TB36 358 aa17.09■□□□□ 0.33
TUBB3-209ENST00000555609 ZNF606Q8WXB4 792 aa17.09■□□□□ 0.33
TUBB3-209ENST00000555609 C9orf72Q96LT7 481 aa17.09■□□□□ 0.33
TUBB3-209ENST00000555609 PCDH9Q9HC56 1237 aa17.09■□□□□ 0.33
TUBB3-209ENST00000555609 DNAJC17Q9NVM6 304 aaKnown RBP17.09■□□□□ 0.33
TUBB3-209ENST00000555609 ZNF148Q9UQR1 794 aa17.09■□□□□ 0.33
TUBB3-209ENST00000555609 USTQ9Y2C2 406 aa17.09■□□□□ 0.33
TUBB3-209ENST00000555609 ADGRA2Q96PE1 1338 aa17.08■□□□□ 0.33
TUBB3-209ENST00000555609 TCRBV5S1A1TA0A578 114 aa17.08■□□□□ 0.33
TUBB3-209ENST00000555609 OATP04181 439 aa17.08■□□□□ 0.33
TUBB3-209ENST00000555609 KRT1P04264 644 aa17.08■□□□□ 0.33
TUBB3-209ENST00000555609 TSHRP16473 764 aa17.08■□□□□ 0.33
TUBB3-209ENST00000555609 CD58P19256 250 aa17.08■□□□□ 0.33
TUBB3-209ENST00000555609 GLRA2P23416 452 aa17.08■□□□□ 0.33
TUBB3-209ENST00000555609 ELF1P32519 619 aa17.08■□□□□ 0.33
TUBB3-209ENST00000555609 ACOT2P49753 483 aa17.08■□□□□ 0.33
TUBB3-209ENST00000555609 CXCL9Q07325 125 aa17.08■□□□□ 0.33
TUBB3-209ENST00000555609 NCOA4Q13772 614 aa17.08■□□□□ 0.33
TUBB3-209ENST00000555609 SETDB1Q15047 1291 aa17.08■□□□□ 0.33
TUBB3-209ENST00000555609 MTERF2Q49AM1 385 aa17.08■□□□□ 0.33
TUBB3-209ENST00000555609 TMEM63BQ5T3F8 832 aa17.08■□□□□ 0.33
TUBB3-209ENST00000555609 DCAF15Q66K64 600 aa17.08■□□□□ 0.33
TUBB3-209ENST00000555609 CIAPIN1Q6FI81 312 aa17.08■□□□□ 0.33
TUBB3-209ENST00000555609 SPOPLQ6IQ16 392 aa17.08■□□□□ 0.33
TUBB3-209ENST00000555609 SPOCD1Q6ZMY3 1216 aa17.08■□□□□ 0.33
TUBB3-209ENST00000555609 PHLDB2Q86SQ0 1253 aa17.08■□□□□ 0.33
TUBB3-209ENST00000555609 WDR49Q8IV35 697 aa17.08■□□□□ 0.33
TUBB3-209ENST00000555609 RIPK3Q9Y572 518 aa17.08■□□□□ 0.33
TUBB3-209ENST00000555609 NUB1Q9Y5A7 615 aa17.08■□□□□ 0.33
TUBB3-209ENST00000555609 COL4A5P29400 1685 aa17.08■□□□□ 0.32
TUBB3-209ENST00000555609 WDR81Q562E7 1941 aa17.08■□□□□ 0.32
TUBB3-209ENST00000555609 IGF2BP3O00425 579 aaKnown RBP eCLIP17.07■□□□□ 0.32
TUBB3-209ENST00000555609 EIF4BP23588 611 aaKnown RBP17.07■□□□□ 0.32
TUBB3-209ENST00000555609 RPS12P25398 132 aaKnown RBP17.07■□□□□ 0.32
TUBB3-209ENST00000555609 ARSEP51690 589 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 YARSP54577 528 aaKnown RBP17.07■□□□□ 0.32
TUBB3-209ENST00000555609 TMED2Q15363 201 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 OASLQ15646 514 aaKnown RBP17.07■□□□□ 0.32
TUBB3-209ENST00000555609 TFDP3Q5H9I0 405 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 LMBRD2Q68DH5 695 aaPredicted RBP17.07■□□□□ 0.32
TUBB3-209ENST00000555609 SNRNP48Q6IEG0 339 aaKnown RBP17.07■□□□□ 0.32
TUBB3-209ENST00000555609 DNAJC24Q6P3W2 148 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 FITM2Q8N6M3 262 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 TTC13Q8NBP0 860 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 SMC6Q96SB8 1091 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 ACAD9Q9H845 621 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 ZNF302Q9NR11 478 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 DNPEPQ9ULA0 475 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 PCDHGC3Q9UN70 934 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 USH1CQ9Y6N9 552 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 ZNF541Q9H0D2 1346 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 SIP14410 1827 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 hCG_1818297A0A087WSY0 165 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 C19orf81C9J6K1 198 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 ASS1P00966 412 aaKnown RBP17.07■□□□□ 0.32
TUBB3-209ENST00000555609 GH1P01241 217 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 ALDH3A1P30838 453 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 YWHAEP62258 255 aaKnown RBP17.07■□□□□ 0.32
TUBB3-209ENST00000555609 LACTBP83111 547 aaPredicted RBP17.07■□□□□ 0.32
TUBB3-209ENST00000555609 PDK4Q16654 411 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 PARP6Q2NL67 630 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 LLGL2Q6P1M3 1020 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 TLDC1Q6P9B6 456 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 PASD1Q8IV76 773 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 BRSK2Q8IWQ3 736 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 ASAP3Q8TDY4 903 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 SLC7A3Q8WY07 619 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 ELMO3Q96BJ8 720 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 ANKRD27Q96NW4 1050 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 TRABDQ9H4I3 376 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 CYP39A1Q9NYL5 469 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 TBK1Q9UHD2 729 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 STRIP2Q9ULQ0 834 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 PTPRJQ12913 1337 aa17.07■□□□□ 0.32
TUBB3-209ENST00000555609 DCTN3O75935 186 aa17.06■□□□□ 0.32
TUBB3-209ENST00000555609 UNC5CO95185 931 aa17.06■□□□□ 0.32
TUBB3-209ENST00000555609 CFHP08603 1231 aa17.06■□□□□ 0.32
TUBB3-209ENST00000555609 GCAP28676 217 aa17.06■□□□□ 0.32
TUBB3-209ENST00000555609 FOXN2P32314 431 aa17.06■□□□□ 0.32
TUBB3-209ENST00000555609 PHBP35232 272 aa17.06■□□□□ 0.32
TUBB3-209ENST00000555609 ALDH5A1P51649 535 aaPredicted RBP17.06■□□□□ 0.32
TUBB3-209ENST00000555609 WNT7BP56706 349 aa17.06■□□□□ 0.32
TUBB3-209ENST00000555609 WDR4P57081 412 aaKnown RBP17.06■□□□□ 0.32
TUBB3-209ENST00000555609 TGFB2P61812 414 aa17.06■□□□□ 0.32
TUBB3-209ENST00000555609 PPP1R15BQ5SWA1 713 aa17.06■□□□□ 0.32
TUBB3-209ENST00000555609 RNASEH2BQ5TBB1 312 aaKnown RBP17.06■□□□□ 0.32
TUBB3-209ENST00000555609 CGB2Q6NT52 195 aa17.06■□□□□ 0.32
TUBB3-209ENST00000555609 MFSD7Q6UXD7 560 aa17.06■□□□□ 0.32
TUBB3-209ENST00000555609 SCYL3Q8IZE3 742 aa17.06■□□□□ 0.32
TUBB3-209ENST00000555609 ZNF280CQ8ND82 737 aa17.06■□□□□ 0.32
TUBB3-209ENST00000555609 PWWP2AQ96N64 755 aa17.06■□□□□ 0.32
TUBB3-209ENST00000555609 HAPLN2Q9GZV7 340 aa17.06■□□□□ 0.32
TUBB3-209ENST00000555609 NRBP2Q9NSY0 501 aa17.06■□□□□ 0.32
TUBB3-209ENST00000555609 NOP53Q9NZM5 478 aaKnown RBP17.06■□□□□ 0.32
TUBB3-209ENST00000555609 ZNF112Q9UJU3 913 aa17.06■□□□□ 0.32
TUBB3-209ENST00000555609 CEP83Q9Y592 693 aa17.06■□□□□ 0.32
TUBB3-209ENST00000555609 IGKV6D-21A0A0A0MT36 114 aa17.05■□□□□ 0.32
TUBB3-209ENST00000555609 LRRIQ4A6NIV6 560 aa17.05■□□□□ 0.32
TUBB3-209ENST00000555609 EFNA5P52803 228 aa17.05■□□□□ 0.32
TUBB3-209ENST00000555609 KCNJ2P63252 427 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms