RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 CROCCP2Q86T23 111 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 FBXO11Q86XK2 927 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 SLFN12Q8IYM2 578 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 NETO2Q8NC67 525 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 CFAP57Q96MR6 1250 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 PAFAH2Q99487 392 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 APOL6Q9BWW8 343 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 IQCGQ9H095 443 aaKnown RBP9.36□□□□□ -0.91
SYNE2-217ENST00000555022 PCSK1NQ9UHG2 260 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 FZD1Q9UP38 647 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 STARD13Q9Y3M8 1113 aa9.36□□□□□ -0.91
SYNE2-217ENST00000555022 DCAF8L1A6NGE4 600 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 SLC16A3O15427 465 aaKnown RBP9.35□□□□□ -0.91
SYNE2-217ENST00000555022 ATP6V1G1O75348 118 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 MT-ND3P03897 115 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 FDX1P10109 184 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 COG7P83436 770 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 TMPRSS15P98073 1019 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 STAT4Q14765 748 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 SF3B3Q15393 1217 aaKnown RBP9.35□□□□□ -0.91
SYNE2-217ENST00000555022 TRIP10Q15642 601 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 ZRSR2Q15696 482 aaKnown RBP9.35□□□□□ -0.91
SYNE2-217ENST00000555022 PDCD2Q16342 344 aaPredicted RBP9.35□□□□□ -0.91
SYNE2-217ENST00000555022 ZC3H12AQ5D1E8 599 aaKnown RBP9.35□□□□□ -0.91
SYNE2-217ENST00000555022 WASHC2DQ5SRD0 308 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 CYP4A22Q5TCH4 519 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 TMEM130Q8N3G9 435 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 LENG9Q96B70 501 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 DIS3Q9Y2L1 958 aaKnown RBP9.35□□□□□ -0.91
SYNE2-217ENST00000555022 ADGRA3Q8IWK6 1321 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 ZNF142P52746 1687 aaPredicted RBP9.35□□□□□ -0.91
SYNE2-217ENST00000555022 LIN7AO14910 233 aaPredicted RBP9.35□□□□□ -0.91
SYNE2-217ENST00000555022 FOXD2O60548 495 aaPredicted RBP9.35□□□□□ -0.91
SYNE2-217ENST00000555022 LYPLA1O75608 230 aaPredicted RBP9.35□□□□□ -0.91
SYNE2-217ENST00000555022 TOM1L1O75674 476 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 PEX2P28328 305 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 TPP2P29144 1249 aaPredicted RBP9.35□□□□□ -0.91
SYNE2-217ENST00000555022 NSFP46459 744 aaKnown RBP9.35□□□□□ -0.91
SYNE2-217ENST00000555022 MKRN3Q13064 507 aaKnown RBP9.35□□□□□ -0.91
SYNE2-217ENST00000555022 GK3PQ14409 553 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 FNBP1LQ5T0N5 605 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 BSPRYQ5W0U4 402 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 PADI6Q6TGC4 694 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 SCARA5Q6ZMJ2 495 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 HACE1Q8IYU2 909 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 PPM1NQ8N819 430 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 DRAXINQ8NBI3 349 aaPredicted RBP9.35□□□□□ -0.91
SYNE2-217ENST00000555022 PPP1R14CQ8TAE6 165 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 PRPF31Q8WWY3 499 aaKnown RBP9.35□□□□□ -0.91
SYNE2-217ENST00000555022 CD101Q93033 1021 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 MTBPQ96DY7 904 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 HIC2Q96JB3 615 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 ZNF668Q96K58 619 aaPredicted RBP9.35□□□□□ -0.91
SYNE2-217ENST00000555022 EBF4Q9BQW3 602 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 TMEM109Q9BVC6 243 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 NOCTQ9UK39 431 aaKnown RBP9.35□□□□□ -0.91
SYNE2-217ENST00000555022 IKBKGQ9Y6K9 419 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 CYP3A7-CYP3A51PA0A087WV96 503 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 ANKRD33BA6NCL7 494 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 UGT1A9O60656 530 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 ANPEPP15144 967 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 GLRA2P23416 452 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 GRIA2P42262 883 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 AQP4P55087 323 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 GDF10P55107 478 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 FAAP100Q0VG06 881 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 DLG1Q12959 904 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 CDC16Q13042 620 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 PTK6Q13882 451 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 RABGAP1LQ5R372 815 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 DENND5BQ6ZUT9 1274 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 PTAR1Q7Z6K3 402 aaPredicted RBP9.35□□□□□ -0.91
SYNE2-217ENST00000555022 LCA5Q86VQ0 697 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 CPXCR1Q8N123 301 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 GALNT4Q8N4A0 578 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 FBXO36Q8NEA4 188 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 LMO3Q8TAP4 145 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 C7orf43Q8WVR3 580 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 OPTNQ96CV9 577 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 GRIP2Q9C0E4 1043 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 LRRC19Q9H756 370 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 SYNCQ9H7C4 482 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 UGT1A7Q9HAW7 530 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 UGT1A10Q9HAW8 530 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 UGT1A8Q9HAW9 530 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 SLC17A6Q9P2U8 582 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 TCEAL9Q9UHQ7 104 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 AGTPBP1Q9UPW5 1226 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 FRMPD4Q14CM0 1322 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 MROH7Q68CQ1 1323 aa9.35□□□□□ -0.91
SYNE2-217ENST00000555022 PRR5-ARHGAP8B1AHC4 643 aa9.34□□□□□ -0.91
SYNE2-217ENST00000555022 SUPT3HO75486 399 aa9.34□□□□□ -0.91
SYNE2-217ENST00000555022 CSDE1O75534 798 aaKnown RBP9.34□□□□□ -0.91
SYNE2-217ENST00000555022 DGKIO75912 1065 aa9.34□□□□□ -0.91
SYNE2-217ENST00000555022 WFS1O76024 890 aa9.34□□□□□ -0.91
SYNE2-217ENST00000555022 MAGEA10P43363 369 aaPredicted RBP9.34□□□□□ -0.91
SYNE2-217ENST00000555022 CLK2P49760 499 aaKnown RBP9.34□□□□□ -0.91
SYNE2-217ENST00000555022 ARHGAP8P85298 464 aa9.34□□□□□ -0.91
SYNE2-217ENST00000555022 SLC5A9Q2M3M2 681 aa9.34□□□□□ -0.91
SYNE2-217ENST00000555022 KCTD21Q4G0X4 260 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms