RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 FOXI1Q12951 378 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 TARDBPQ13148 414 aaKnown RBP eCLIP1.92□□□□□ -2.1
PRPF39-208ENST00000554785 RAB39AQ14964 217 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 PTPAQ15257 358 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 CCDC157Q569K6 752 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 LY6G5CQ5SRR4 150 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 LCE1EQ5T753 118 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 CCSAPQ6IQ19 270 aaPredicted RBP1.92□□□□□ -2.1
PRPF39-208ENST00000554785 DRICH1Q6PGQ1 229 aaPredicted RBP1.92□□□□□ -2.1
PRPF39-208ENST00000554785 OLFML1Q6UWY5 402 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 KSR2Q6VAB6 950 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 GADL1Q6ZQY3 521 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 CHST15Q7LFX5 561 aaPredicted RBP1.92□□□□□ -2.1
PRPF39-208ENST00000554785 OVCH2Q7RTZ1 564 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 CCAR1Q8IX12 1150 aaKnown RBP1.92□□□□□ -2.1
PRPF39-208ENST00000554785 CCDC146Q8IYE0 955 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 SYNE4Q8N205 404 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 TFAP2CQ92754 450 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 RAB24Q969Q5 203 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 RGMAQ96B86 450 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 TIFAQ96CG3 184 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 TMX3Q96JJ7 454 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 MRGPRX4Q96LA9 322 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 DMRTA2Q96SC8 542 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 CGRRF1Q99675 332 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 MYOCQ99972 504 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 SLC46A2Q9BY10 475 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 FAM204AQ9H8W3 233 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 MAN1C1Q9NR34 630 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 TMEM140Q9NV12 185 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 SYBUQ9NX95 663 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 CALCOCO1Q9P1Z2 691 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 POGKQ9P215 609 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 AJAP1Q9UKB5 411 aaPredicted RBP1.92□□□□□ -2.1
PRPF39-208ENST00000554785 POLHQ9Y253 713 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 USP15Q9Y4E8 981 aaPredicted RBP1.92□□□□□ -2.1
PRPF39-208ENST00000554785 EPN1Q9Y6I3 576 aaPredicted RBP1.92□□□□□ -2.1
PRPF39-208ENST00000554785 TCOF1Q13428 1488 aaKnown RBP1.92□□□□□ -2.1
PRPF39-208ENST00000554785 VWDEQ8N2E2 1590 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 MYBBP1AQ9BQG0 1328 aaKnown RBP1.92□□□□□ -2.1
PRPF39-208ENST00000554785 SALL3Q9BXA9 1300 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 PTPRKQ15262 1439 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 CPS1P31327 1500 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 ABCC1P33527 1531 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 SYCP2Q9BX26 1530 aa1.92□□□□□ -2.1
PRPF39-208ENST00000554785 CCDC194A0A1B0GVG4 234 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 CXorf49A8MYA2 514 aaPredicted RBP1.91□□□□□ -2.1
PRPF39-208ENST00000554785 TEX33O43247 280 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 B3GALT2O43825 422 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 GPR32O75388 356 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 SPDEFO95238 335 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 ARIH2O95376 493 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 CDK4P11802 303 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 ALOX15P16050 662 aaPredicted RBP1.91□□□□□ -2.1
PRPF39-208ENST00000554785 ITGB6P18564 788 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 DDCP20711 480 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 HTR1BP28222 390 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 GUCY1A2P33402 732 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 IL12RB1P42701 662 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 HK3P52790 923 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 NOGQ13253 232 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 SP140Q13342 867 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 MTM1Q13496 603 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 TP53BP2Q13625 1128 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 LLGL1Q15334 1064 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 MAP9Q49MG5 647 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 KHDC1Q4VXA5 237 aaKnown RBP1.91□□□□□ -2.1
PRPF39-208ENST00000554785 FAM47AQ5JRC9 791 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 ZNF572Q7Z3I7 529 aaPredicted RBP1.91□□□□□ -2.1
PRPF39-208ENST00000554785 SRGAP1Q7Z6B7 1085 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 ARHGEF19Q8IW93 802 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 ZGPATQ8N5A5 531 aaKnown RBP1.91□□□□□ -2.1
PRPF39-208ENST00000554785 CPEB3Q8NE35 698 aaKnown RBP1.91□□□□□ -2.1
PRPF39-208ENST00000554785 IFI44Q8TCB0 444 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 CASKIN2Q8WXE0 1202 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 TTC17Q96AE7 1141 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 CDK5RAP3Q96JB5 506 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 PHACTR3Q96KR7 559 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 VRK1Q99986 396 aaPredicted RBP1.91□□□□□ -2.1
PRPF39-208ENST00000554785 TMEM60Q9H2L4 133 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 ARNT2Q9HBZ2 717 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 ALG13Q9NP73 1137 aaKnown RBP1.91□□□□□ -2.1
PRPF39-208ENST00000554785 MOCS1Q9NZB8 636 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 SLC23A1Q9UHI7 598 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 STXBP5LQ9Y2K9 1186 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 PCDHA3Q9Y5H8 950 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 NR2E3Q9Y5X4 410 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 KDM5CP41229 1560 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 MROH2AA6NES4 1674 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 RGS12O14924 1447 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 SYNMO15061 1565 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 SAMD9Q5K651 1589 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 UGGT1Q9NYU2 1555 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 MAGI2Q86UL8 1455 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 LRRC14BA6NHZ5 514 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 A6NNZ2 444 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 B5MCH6 92 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 FAM227AF5H4B4 570 aa1.91□□□□□ -2.1
PRPF39-208ENST00000554785 RNASET2O00584 256 aaKnown RBP1.91□□□□□ -2.1
PRPF39-208ENST00000554785 KIAA0355O15063 1070 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms