RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 INSL6Q9Y581 213 aa15.33■□□□□ 0.04
SHOX2-206ENST00000554685 SOWAHDA6NJG2 315 aa15.32■□□□□ 0.04
SHOX2-206ENST00000554685 NRP1O14786 923 aa15.32■□□□□ 0.04
SHOX2-206ENST00000554685 CYP11A1P05108 521 aa15.32■□□□□ 0.04
SHOX2-206ENST00000554685 GALTP07902 379 aa15.32■□□□□ 0.04
SHOX2-206ENST00000554685 CYP11B1P15538 503 aa15.32■□□□□ 0.04
SHOX2-206ENST00000554685 TNFAIP3P21580 790 aa15.32■□□□□ 0.04
SHOX2-206ENST00000554685 GNA15P30679 374 aa15.32■□□□□ 0.04
SHOX2-206ENST00000554685 GNL1P36915 607 aaPredicted RBP15.32■□□□□ 0.04
SHOX2-206ENST00000554685 SLC11A1P49279 550 aa15.32■□□□□ 0.04
SHOX2-206ENST00000554685 CDH8P55286 799 aa15.32■□□□□ 0.04
SHOX2-206ENST00000554685 HTRA4P83105 476 aaPredicted RBP15.32■□□□□ 0.04
SHOX2-206ENST00000554685 SPA17Q15506 151 aa15.32■□□□□ 0.04
SHOX2-206ENST00000554685 TIGD5Q53EQ6 642 aa15.32■□□□□ 0.04
SHOX2-206ENST00000554685 FAM117BQ6P1L5 589 aa15.32■□□□□ 0.04
SHOX2-206ENST00000554685 TXLNBQ8N3L3 684 aa15.32■□□□□ 0.04
SHOX2-206ENST00000554685 PDCL2Q8N4E4 241 aa15.32■□□□□ 0.04
SHOX2-206ENST00000554685 TMEM176AQ96HP8 235 aa15.32■□□□□ 0.04
SHOX2-206ENST00000554685 TNIP3Q96KP6 325 aa15.32■□□□□ 0.04
SHOX2-206ENST00000554685 ZNF558Q96NG5 402 aa15.32■□□□□ 0.04
SHOX2-206ENST00000554685 MRPL45Q9BRJ2 306 aaKnown RBP15.32■□□□□ 0.04
SHOX2-206ENST00000554685 CACNG4Q9UBN1 327 aa15.32■□□□□ 0.04
SHOX2-206ENST00000554685 STK39Q9UEW8 545 aa15.32■□□□□ 0.04
SHOX2-206ENST00000554685 ADAM28Q9UKQ2 775 aa15.32■□□□□ 0.04
SHOX2-206ENST00000554685 SF3B1O75533 1304 aaKnown RBP eCLIP15.32■□□□□ 0.04
SHOX2-206ENST00000554685 A8MXQ7 604 aa15.31■□□□□ 0.04
SHOX2-206ENST00000554685 EIF3CLB5ME19 914 aaKnown RBP15.31■□□□□ 0.04
SHOX2-206ENST00000554685 SYN3O14994 580 aa15.31■□□□□ 0.04
SHOX2-206ENST00000554685 CCP110O43303 1012 aa15.31■□□□□ 0.04
SHOX2-206ENST00000554685 B4GALT3O60512 393 aa15.31■□□□□ 0.04
SHOX2-206ENST00000554685 NDUFA10O95299 355 aa15.31■□□□□ 0.04
SHOX2-206ENST00000554685 VDRP11473 427 aa15.31■□□□□ 0.04
SHOX2-206ENST00000554685 ATP2A2P16615 1042 aaKnown RBP15.31■□□□□ 0.04
SHOX2-206ENST00000554685 PCSK1P29120 753 aa15.31■□□□□ 0.04
SHOX2-206ENST00000554685 KIF11P52732 1056 aa15.31■□□□□ 0.04
SHOX2-206ENST00000554685 NDST1P52848 882 aa15.31■□□□□ 0.04
SHOX2-206ENST00000554685 BCAR1P56945 870 aa15.31■□□□□ 0.04
SHOX2-206ENST00000554685 KRT83P78385 493 aa15.31■□□□□ 0.04
SHOX2-206ENST00000554685 CDR2Q01850 454 aa15.31■□□□□ 0.04
SHOX2-206ENST00000554685 STILQ15468 1287 aa15.31■□□□□ 0.04
SHOX2-206ENST00000554685 PPP1R2P3Q6NXS1 205 aa15.31■□□□□ 0.04
SHOX2-206ENST00000554685 TRIM72Q6ZMU5 477 aa15.31■□□□□ 0.04
SHOX2-206ENST00000554685 ZNF571Q7Z3V5 609 aaPredicted RBP15.31■□□□□ 0.04
SHOX2-206ENST00000554685 SLC47A2Q86VL8 602 aa15.31■□□□□ 0.04
SHOX2-206ENST00000554685 HERC6Q8IVU3 1022 aa15.31■□□□□ 0.04
SHOX2-206ENST00000554685 KBTBD7Q8WVZ9 684 aa15.31■□□□□ 0.04
SHOX2-206ENST00000554685 RABGGTAQ92696 567 aa15.31■□□□□ 0.04
SHOX2-206ENST00000554685 EIF3CQ99613 913 aaKnown RBP15.31■□□□□ 0.04
SHOX2-206ENST00000554685 RAD9AQ99638 391 aa15.31■□□□□ 0.04
SHOX2-206ENST00000554685 AGPAT1Q99943 283 aa15.31■□□□□ 0.04
SHOX2-206ENST00000554685 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.31■□□□□ 0.04
SHOX2-206ENST00000554685 PDCL3Q9H2J4 239 aa15.31■□□□□ 0.04
SHOX2-206ENST00000554685 CWH43Q9H720 699 aa15.31■□□□□ 0.04
SHOX2-206ENST00000554685 PUF60Q9UHX1 559 aaKnown RBP15.31■□□□□ 0.04
SHOX2-206ENST00000554685 NOCTQ9UK39 431 aaKnown RBP15.31■□□□□ 0.04
SHOX2-206ENST00000554685 ZKSCAN5Q9Y2L8 839 aa15.31■□□□□ 0.04
SHOX2-206ENST00000554685 EPN1Q9Y6I3 576 aaPredicted RBP15.31■□□□□ 0.04
SHOX2-206ENST00000554685 GABRDO14764 452 aa15.3■□□□□ 0.04
SHOX2-206ENST00000554685 THAP12O43422 761 aa15.3■□□□□ 0.04
SHOX2-206ENST00000554685 PLEKP08567 350 aaPredicted RBP15.3■□□□□ 0.04
SHOX2-206ENST00000554685 CD19P15391 556 aa15.3■□□□□ 0.04
SHOX2-206ENST00000554685 PPM1AP35813 382 aa15.3■□□□□ 0.04
SHOX2-206ENST00000554685 MAGEA10P43363 369 aaPredicted RBP15.3■□□□□ 0.04
SHOX2-206ENST00000554685 BRCC3P46736 316 aa15.3■□□□□ 0.04
SHOX2-206ENST00000554685 RAD23BP54727 409 aa15.3■□□□□ 0.04
SHOX2-206ENST00000554685 SLC18A3Q16572 532 aa15.3■□□□□ 0.04
SHOX2-206ENST00000554685 ZNF394Q53GI3 561 aa15.3■□□□□ 0.04
SHOX2-206ENST00000554685 C10orf76Q5T2E6 689 aa15.3■□□□□ 0.04
SHOX2-206ENST00000554685 RASIP1Q5U651 963 aa15.3■□□□□ 0.04
SHOX2-206ENST00000554685 WSCD1Q658N2 575 aa15.3■□□□□ 0.04
SHOX2-206ENST00000554685 CD300LGQ6UXG3 332 aa15.3■□□□□ 0.04
SHOX2-206ENST00000554685 RAD9BQ6WBX8 426 aa15.3■□□□□ 0.04
SHOX2-206ENST00000554685 NOP9Q86U38 636 aaKnown RBP15.3■□□□□ 0.04
SHOX2-206ENST00000554685 GPIHBP1Q8IV16 184 aa15.3■□□□□ 0.04
SHOX2-206ENST00000554685 THEM5Q8N1Q8 247 aa15.3■□□□□ 0.04
SHOX2-206ENST00000554685 FIBCD1Q8N539 461 aa15.3■□□□□ 0.04
SHOX2-206ENST00000554685 SLC4A11Q8NBS3 891 aa15.3■□□□□ 0.04
SHOX2-206ENST00000554685 SPDYE1Q8NFV5 336 aaPredicted RBP15.3■□□□□ 0.04
SHOX2-206ENST00000554685 HASPINQ8TF76 798 aa15.3■□□□□ 0.04
SHOX2-206ENST00000554685 ELOVL4Q9GZR5 314 aa15.3■□□□□ 0.04
SHOX2-206ENST00000554685 SEPT11Q9NVA2 429 aaKnown RBP15.3■□□□□ 0.04
SHOX2-206ENST00000554685 CXXC1Q9P0U4 656 aaPredicted RBP15.3■□□□□ 0.04
SHOX2-206ENST00000554685 STXBP5LQ9Y2K9 1186 aa15.3■□□□□ 0.04
SHOX2-206ENST00000554685 CEP83Q9Y592 693 aa15.3■□□□□ 0.04
SHOX2-206ENST00000554685 ZSCAN12O43309 604 aa15.29■□□□□ 0.04
SHOX2-206ENST00000554685 CCDC175P0C221 793 aa15.29■□□□□ 0.04
SHOX2-206ENST00000554685 YWHAHQ04917 246 aaPredicted RBP15.29■□□□□ 0.04
SHOX2-206ENST00000554685 ASTE1Q2TB18 679 aaPredicted RBP15.29■□□□□ 0.04
SHOX2-206ENST00000554685 SGO2Q562F6 1265 aa15.29■□□□□ 0.04
SHOX2-206ENST00000554685 OVOS1Q6IE37 1185 aa15.29■□□□□ 0.04
SHOX2-206ENST00000554685 FUT10Q6P4F1 479 aa15.29■□□□□ 0.04
SHOX2-206ENST00000554685 KCNT2Q6UVM3 1135 aa15.29■□□□□ 0.04
SHOX2-206ENST00000554685 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.29■□□□□ 0.04
SHOX2-206ENST00000554685 CRYBG2Q8N1P7 616 aa15.29■□□□□ 0.04
SHOX2-206ENST00000554685 WHAMMQ8TF30 809 aa15.29■□□□□ 0.04
SHOX2-206ENST00000554685 RNPC3Q96LT9 517 aaKnown RBP15.29■□□□□ 0.04
SHOX2-206ENST00000554685 HEXIM2Q96MH2 286 aaKnown RBP15.29■□□□□ 0.04
SHOX2-206ENST00000554685 SYT11Q9BT88 431 aa15.29■□□□□ 0.04
SHOX2-206ENST00000554685 OXCT2Q9BYC2 517 aaPredicted RBP15.29■□□□□ 0.04
SHOX2-206ENST00000554685 MARCH5Q9NX47 278 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms