RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 NUDT11Q96G61 164 aa4.86□□□□□ -1.63
VTI1B-203ENST00000554636 LOXL4Q96JB6 756 aa4.86□□□□□ -1.63
VTI1B-203ENST00000554636 TMEM47Q9BQJ4 181 aa4.86□□□□□ -1.63
VTI1B-203ENST00000554636 TACO1Q9BSH4 297 aaKnown RBP4.86□□□□□ -1.63
VTI1B-203ENST00000554636 RANBP17Q9H2T7 1088 aaKnown RBP4.86□□□□□ -1.63
VTI1B-203ENST00000554636 C11orf49Q9H6J7 331 aa4.86□□□□□ -1.63
VTI1B-203ENST00000554636 RAVER2Q9HCJ3 691 aaKnown RBP4.86□□□□□ -1.63
VTI1B-203ENST00000554636 STX8Q9UNK0 236 aa4.86□□□□□ -1.63
VTI1B-203ENST00000554636 RAD50Q92878 1312 aa4.86□□□□□ -1.63
VTI1B-203ENST00000554636 DNM1LO00429 736 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 MAN2B1O00754 1011 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 SEPT4O43236 478 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 ZBED4O75132 1171 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 AMY2AP04746 511 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 PDHBP11177 359 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 TOP1P11387 765 aaKnown RBP4.85□□□□□ -1.63
VTI1B-203ENST00000554636 PTPN1P18031 435 aaKnown RBP4.85□□□□□ -1.63
VTI1B-203ENST00000554636 AMY2BP19961 511 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 CHMLP26374 656 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 NT5C2P49902 561 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 EPHA5P54756 1037 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 JAM2P57087 298 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 SNAP25P60880 206 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 RBL2Q08999 1139 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 BMS1Q14692 1282 aaKnown RBP4.85□□□□□ -1.63
VTI1B-203ENST00000554636 GPR19Q15760 415 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 SMAD2Q15796 467 aaKnown RBP4.85□□□□□ -1.63
VTI1B-203ENST00000554636 CRY1Q16526 586 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 CCDC96Q2M329 555 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 TKFCQ3LXA3 575 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 PRAMEF19Q5SWL8 479 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 SYDE2Q5VT97 1194 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 ANO1Q5XXA6 986 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 BTNL9Q6UXG8 535 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 GPR155Q7Z3F1 870 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 LIMS2Q7Z4I7 341 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 KBTBD2Q8IY47 623 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 CPXCR1Q8N123 301 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 CHST13Q8NET6 341 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 CHMP4CQ96CF2 233 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 KATNBL1Q9H079 304 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 RNF41Q9H4P4 317 aaPredicted RBP4.85□□□□□ -1.63
VTI1B-203ENST00000554636 A1CFQ9NQ94 594 aaKnown RBP4.85□□□□□ -1.63
VTI1B-203ENST00000554636 JADE2Q9NQC1 790 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 TOMM22Q9NS69 142 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 RNF146Q9NTX7 359 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 SLC5A4Q9NY91 659 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 ARHGAP28Q9P2N2 729 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 NRBP1Q9UHY1 535 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 SRPK3Q9UPE1 567 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 COQ6Q9Y2Z9 468 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 ATP23Q9Y6H3 246 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 ASTN1O14525 1302 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 FRMPD2Q68DX3 1309 aaPredicted RBP4.85□□□□□ -1.63
VTI1B-203ENST00000554636 LTBP2Q14767 1821 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 DNAH12Q6ZR08 3092 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 LAMA3Q16787 3333 aa4.85□□□□□ -1.63
VTI1B-203ENST00000554636 WDR19Q8NEZ3 1342 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 PRAMEF25A6NGN4 478 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 FAM90A27PA6NNH2 459 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 ZNF839A8K0R7 811 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 B4E1Z4 1266 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 ARVCFO00192 962 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 ZNF213O14771 459 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 ADCY6O43306 1168 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 B4GALT4O60513 344 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 SNAI1O95863 264 aaPredicted RBP4.84□□□□□ -1.63
VTI1B-203ENST00000554636 PLATP00750 562 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 ITGB3P05106 788 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 ENO2P09104 434 aaPredicted RBP4.84□□□□□ -1.63
VTI1B-203ENST00000554636 CNGA1P29973 690 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 SLC16A2P36021 539 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 FXR1P51114 621 aaKnown RBP eCLIP4.84□□□□□ -1.63
VTI1B-203ENST00000554636 KRTAP10-2P60368 255 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 PTH1RQ03431 593 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 ZNF543Q08ER8 600 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 EFEMP1Q12805 493 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 LRRC26Q2I0M4 334 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 SPATS1Q496A3 300 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 MUM1L1Q5H9M0 696 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 FAM47CQ5HY64 1035 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 CPZQ66K79 652 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 CCDC174Q6PII3 467 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 MAMDC4Q6UXC1 1216 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 MFSD6Q6ZSS7 791 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 STOX1Q6ZVD7 989 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 CYB5R4Q7L1T6 521 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 SKAP1Q86WV1 359 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 MSL3Q8N5Y2 521 aaKnown RBP4.84□□□□□ -1.63
VTI1B-203ENST00000554636 ENAHQ8N8S7 591 aaPredicted RBP4.84□□□□□ -1.63
VTI1B-203ENST00000554636 FAM133AQ8N9E0 248 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 SLC7A14Q8TBB6 771 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 IGDCC4Q8TDY8 1250 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 CHURC1Q8WUH1 139 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 ANKS1AQ92625 1134 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 ESR2Q92731 530 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 KISS1RQ969F8 398 aaPredicted RBP4.84□□□□□ -1.63
VTI1B-203ENST00000554636 MBD6Q96DN6 1003 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 TTC14Q96N46 770 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 ACAD9Q9H845 621 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms