RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 WDR27A2RRH5 827 aa13.4□□□□□ -0.26
SHMT2-214ENST00000554604 N4BP1O75113 896 aaKnown RBP13.4□□□□□ -0.26
SHMT2-214ENST00000554604 LRG1P02750 347 aa13.4□□□□□ -0.26
SHMT2-214ENST00000554604 NFICP08651 508 aa13.4□□□□□ -0.26
SHMT2-214ENST00000554604 SKILP12757 684 aa13.4□□□□□ -0.26
SHMT2-214ENST00000554604 CPB1P15086 417 aa13.4□□□□□ -0.26
SHMT2-214ENST00000554604 PRCPP42785 496 aa13.4□□□□□ -0.26
SHMT2-214ENST00000554604 CASP5P51878 434 aa13.4□□□□□ -0.26
SHMT2-214ENST00000554604 STX17P56962 302 aa13.4□□□□□ -0.26
SHMT2-214ENST00000554604 ASIC1P78348 528 aa13.4□□□□□ -0.26
SHMT2-214ENST00000554604 YWHAHQ04917 246 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-214ENST00000554604 TBX2Q13207 712 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-214ENST00000554604 TDGQ13569 410 aa13.4□□□□□ -0.26
SHMT2-214ENST00000554604 MRPL58Q14197 206 aaKnown RBP13.4□□□□□ -0.26
SHMT2-214ENST00000554604 ARMCX5Q6P1M9 558 aa13.4□□□□□ -0.26
SHMT2-214ENST00000554604 APTXQ7Z2E3 356 aaKnown RBP13.4□□□□□ -0.26
SHMT2-214ENST00000554604 C17orf53Q8N3J3 647 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-214ENST00000554604 CCDC112Q8NEF3 446 aa13.4□□□□□ -0.26
SHMT2-214ENST00000554604 NOC3LQ8WTT2 800 aaKnown RBP13.4□□□□□ -0.26
SHMT2-214ENST00000554604 NELFBQ8WX92 580 aa13.4□□□□□ -0.26
SHMT2-214ENST00000554604 ASIC4Q96FT7 647 aa13.4□□□□□ -0.26
SHMT2-214ENST00000554604 DHTKD1Q96HY7 919 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-214ENST00000554604 MYADMQ96S97 322 aa13.4□□□□□ -0.26
SHMT2-214ENST00000554604 FAM213AQ9BRX8 229 aa13.4□□□□□ -0.26
SHMT2-214ENST00000554604 STRA6Q9BX79 667 aa13.4□□□□□ -0.26
SHMT2-214ENST00000554604 SMOC2Q9H3U7 446 aa13.4□□□□□ -0.26
SHMT2-214ENST00000554604 CYP4F11Q9HBI6 524 aa13.4□□□□□ -0.26
SHMT2-214ENST00000554604 EPS15L1Q9UBC2 864 aa13.4□□□□□ -0.26
SHMT2-214ENST00000554604 LIMA1Q9UHB6 759 aaKnown RBP13.4□□□□□ -0.26
SHMT2-214ENST00000554604 PIEZO1Q92508 2521 aa13.39□□□□□ -0.27
SHMT2-214ENST00000554604 ARHGEF37A1IGU5 675 aa13.39□□□□□ -0.27
SHMT2-214ENST00000554604 M0QZQ0 153 aa13.39□□□□□ -0.27
SHMT2-214ENST00000554604 PSMA7O14818 248 aa13.39□□□□□ -0.27
SHMT2-214ENST00000554604 PRPF6O94906 941 aaKnown RBP13.39□□□□□ -0.27
SHMT2-214ENST00000554604 ABLIM3O94929 683 aa13.39□□□□□ -0.27
SHMT2-214ENST00000554604 IL18RAPO95256 599 aa13.39□□□□□ -0.27
SHMT2-214ENST00000554604 LDHAP00338 332 aaKnown RBP13.39□□□□□ -0.27
SHMT2-214ENST00000554604 LAMP2P13473 410 aa13.39□□□□□ -0.27
SHMT2-214ENST00000554604 ATF2P15336 505 aa13.39□□□□□ -0.27
SHMT2-214ENST00000554604 ADSSP30520 456 aa13.39□□□□□ -0.27
SHMT2-214ENST00000554604 LILRA4P59901 499 aa13.39□□□□□ -0.27
SHMT2-214ENST00000554604 NTHL1P78549 312 aa13.39□□□□□ -0.27
SHMT2-214ENST00000554604 POU5F1Q01860 360 aaKnown RBP13.39□□□□□ -0.27
SHMT2-214ENST00000554604 TPD52L1Q16890 204 aaPredicted RBP13.39□□□□□ -0.27
SHMT2-214ENST00000554604 FILIP1LQ4L180 1135 aa13.39□□□□□ -0.27
SHMT2-214ENST00000554604 PABPC1LQ4VXU2 614 aaKnown RBP13.39□□□□□ -0.27
SHMT2-214ENST00000554604 TPGS2Q68CL5 300 aa13.39□□□□□ -0.27
SHMT2-214ENST00000554604 NXPE3Q969Y0 559 aa13.39□□□□□ -0.27
SHMT2-214ENST00000554604 SAAL1Q96ER3 474 aa13.39□□□□□ -0.27
SHMT2-214ENST00000554604 OXCT2Q9BYC2 517 aaPredicted RBP13.39□□□□□ -0.27
SHMT2-214ENST00000554604 MFSD1Q9H3U5 465 aa13.39□□□□□ -0.27
SHMT2-214ENST00000554604 TMEM206Q9H813 350 aa13.39□□□□□ -0.27
SHMT2-214ENST00000554604 EXOC1Q9NV70 894 aa13.39□□□□□ -0.27
SHMT2-214ENST00000554604 FBXL21Q9UKT6 434 aa13.39□□□□□ -0.27
SHMT2-214ENST00000554604 C2CD2Q9Y426 696 aa13.39□□□□□ -0.27
SHMT2-214ENST00000554604 TIMM13Q9Y5L4 95 aaPredicted RBP13.39□□□□□ -0.27
SHMT2-214ENST00000554604 ZFP37Q9Y6Q3 630 aaPredicted RBP13.39□□□□□ -0.27
SHMT2-214ENST00000554604 KMT2EQ8IZD2 1858 aa13.39□□□□□ -0.27
SHMT2-214ENST00000554604 CACNA1HO95180 2353 aa13.39□□□□□ -0.27
SHMT2-214ENST00000554604 LRRC10BA6NIK2 292 aa13.38□□□□□ -0.27
SHMT2-214ENST00000554604 PPEF2O14830 753 aa13.38□□□□□ -0.27
SHMT2-214ENST00000554604 TBC1D4O60343 1298 aa13.38□□□□□ -0.27
SHMT2-214ENST00000554604 POU2F2P09086 479 aa13.38□□□□□ -0.27
SHMT2-214ENST00000554604 ODC1P11926 461 aa13.38□□□□□ -0.27
SHMT2-214ENST00000554604 GARTP22102 1010 aa13.38□□□□□ -0.27
SHMT2-214ENST00000554604 PAX3P23760 479 aa13.38□□□□□ -0.27
SHMT2-214ENST00000554604 PLA2G5P39877 138 aa13.38□□□□□ -0.27
SHMT2-214ENST00000554604 AARSP49588 968 aaKnown RBP eCLIP13.38□□□□□ -0.27
SHMT2-214ENST00000554604 ADCY1Q08828 1119 aa13.38□□□□□ -0.27
SHMT2-214ENST00000554604 C9orf57Q5W0N0 161 aa13.38□□□□□ -0.27
SHMT2-214ENST00000554604 SPECC1LQ69YQ0 1117 aa13.38□□□□□ -0.27
SHMT2-214ENST00000554604 OVOS1Q6IE37 1185 aa13.38□□□□□ -0.27
SHMT2-214ENST00000554604 CRELD2Q6UXH1 353 aaPredicted RBP13.38□□□□□ -0.27
SHMT2-214ENST00000554604 UNC13DQ70J99 1090 aa13.38□□□□□ -0.27
SHMT2-214ENST00000554604 TCEAL8Q8IYN2 117 aa13.38□□□□□ -0.27
SHMT2-214ENST00000554604 ELMOD1Q8N336 334 aa13.38□□□□□ -0.27
SHMT2-214ENST00000554604 ANKRD20A12PQ8NF67 263 aa13.38□□□□□ -0.27
SHMT2-214ENST00000554604 RSAD2Q8WXG1 361 aa13.38□□□□□ -0.27
SHMT2-214ENST00000554604 SENP8Q96LD8 212 aa13.38□□□□□ -0.27
SHMT2-214ENST00000554604 FGFBP2Q9BYJ0 223 aa13.38□□□□□ -0.27
SHMT2-214ENST00000554604 KCNH6Q9H252 994 aa13.38□□□□□ -0.27
SHMT2-214ENST00000554604 HCFC1R1Q9NWW0 138 aa13.38□□□□□ -0.27
SHMT2-214ENST00000554604 DPP3Q9NY33 737 aa13.38□□□□□ -0.27
SHMT2-214ENST00000554604 CDH7Q9ULB5 785 aa13.38□□□□□ -0.27
SHMT2-214ENST00000554604 TSC2P49815 1807 aa13.37□□□□□ -0.27
SHMT2-214ENST00000554604 BICDL2A1A5D9 508 aa13.37□□□□□ -0.27
SHMT2-214ENST00000554604 PIRO00625 290 aa13.37□□□□□ -0.27
SHMT2-214ENST00000554604 OAZ2O95190 189 aa13.37□□□□□ -0.27
SHMT2-214ENST00000554604 PTPN2P17706 415 aa13.37□□□□□ -0.27
SHMT2-214ENST00000554604 CCNE1P24864 410 aa13.37□□□□□ -0.27
SHMT2-214ENST00000554604 PBX1P40424 430 aa13.37□□□□□ -0.27
SHMT2-214ENST00000554604 TFAMQ00059 246 aaKnown RBP13.37□□□□□ -0.27
SHMT2-214ENST00000554604 PSMD2Q13200 908 aa13.37□□□□□ -0.27
SHMT2-214ENST00000554604 DNTTIP2Q5QJE6 756 aaKnown RBP13.37□□□□□ -0.27
SHMT2-214ENST00000554604 NT5DC4Q86YG4 428 aa13.37□□□□□ -0.27
SHMT2-214ENST00000554604 FGF13Q92913 245 aa13.37□□□□□ -0.27
SHMT2-214ENST00000554604 HPS3Q969F9 1004 aa13.37□□□□□ -0.27
SHMT2-214ENST00000554604 CBWD1Q9BRT8 395 aa13.37□□□□□ -0.27
SHMT2-214ENST00000554604 PCIF1Q9H4Z3 704 aa13.37□□□□□ -0.27
SHMT2-214ENST00000554604 THAP9Q9H5L6 903 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 260.7 ms