RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 SEPT14Q6ZU15 432 aa7.05□□□□□ -1.28
SCFD1-212ENST00000554486 NLRX1Q86UT6 975 aa7.05□□□□□ -1.28
SCFD1-212ENST00000554486 CPNE8Q86YQ8 564 aa7.05□□□□□ -1.28
SCFD1-212ENST00000554486 KRTAP19-1Q8IUB9 90 aa7.05□□□□□ -1.28
SCFD1-212ENST00000554486 ZSWIM2Q8NEG5 633 aa7.05□□□□□ -1.28
SCFD1-212ENST00000554486 TRPV1Q8NER1 839 aa7.05□□□□□ -1.28
SCFD1-212ENST00000554486 KCTD13Q8WZ19 329 aa7.05□□□□□ -1.28
SCFD1-212ENST00000554486 FAM20AQ96MK3 541 aa7.05□□□□□ -1.28
SCFD1-212ENST00000554486 CLIC6Q96NY7 704 aa7.05□□□□□ -1.28
SCFD1-212ENST00000554486 MPHOSPH6Q99547 160 aaKnown RBP7.05□□□□□ -1.28
SCFD1-212ENST00000554486 ZNF577Q9BSK1 485 aa7.05□□□□□ -1.28
SCFD1-212ENST00000554486 VTA1Q9NP79 307 aa7.05□□□□□ -1.28
SCFD1-212ENST00000554486 FANCLQ9NW38 375 aa7.05□□□□□ -1.28
SCFD1-212ENST00000554486 TNFRSF10DQ9UBN6 386 aa7.05□□□□□ -1.28
SCFD1-212ENST00000554486 SRPRBQ9Y5M8 271 aaKnown RBP7.05□□□□□ -1.28
SCFD1-212ENST00000554486 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.04□□□□□ -1.28
SCFD1-212ENST00000554486 VWA3AA6NCI4 1184 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 IPO5O00410 1097 aaKnown RBP7.04□□□□□ -1.28
SCFD1-212ENST00000554486 ENPP3O14638 875 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 PPP1R12AO14974 1030 aaPredicted RBP7.04□□□□□ -1.28
SCFD1-212ENST00000554486 MAFGO15525 162 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 ADCY6O43306 1168 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 CUTAO60888 179 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 TGFB3P10600 412 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 ENDOUP21128 410 aaKnown RBP7.04□□□□□ -1.28
SCFD1-212ENST00000554486 UBA1P22314 1058 aaKnown RBP7.04□□□□□ -1.28
SCFD1-212ENST00000554486 PTGS1P23219 599 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 TRHRP34981 398 aaPredicted RBP7.04□□□□□ -1.28
SCFD1-212ENST00000554486 ME1P48163 572 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 PRMT2P55345 433 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 ACVR2BQ13705 512 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 CBX2Q14781 532 aaPredicted RBP7.04□□□□□ -1.28
SCFD1-212ENST00000554486 ARHGEF6Q15052 776 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 LY6KQ17RY6 165 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 ZC3H12BQ5HYM0 836 aaKnown RBP7.04□□□□□ -1.28
SCFD1-212ENST00000554486 GJC2Q5T442 439 aaPredicted RBP7.04□□□□□ -1.28
SCFD1-212ENST00000554486 ZNF648Q5T619 568 aaPredicted RBP7.04□□□□□ -1.28
SCFD1-212ENST00000554486 LCE3BQ5TA77 95 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 LRCH2Q5VUJ6 765 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 SDE2Q6IQ49 451 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 USP49Q70CQ1 688 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 LILRA2Q8N149 483 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 IGSF22Q8N9C0 903 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 RAET1EQ8TD07 263 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 DPF3Q92784 378 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 FERMT2Q96AC1 680 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 LIN37Q96GY3 246 aaPredicted RBP7.04□□□□□ -1.28
SCFD1-212ENST00000554486 CDHR1Q96JP9 859 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 RIT2Q99578 217 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 CDC6Q99741 560 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 SENP7Q9BQF6 1050 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 PLCD4Q9BRC7 762 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 CSRNP2Q9H175 543 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 UNC45AQ9H3U1 944 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 ABHD16BQ9H3Z7 469 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 TTC12Q9H892 705 aaPredicted RBP7.04□□□□□ -1.28
SCFD1-212ENST00000554486 LMBRD1Q9NUN5 540 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 TELO2Q9Y4R8 837 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 TRIM17Q9Y577 477 aa7.04□□□□□ -1.28
SCFD1-212ENST00000554486 MYH9P35579 1960 aaKnown RBP7.04□□□□□ -1.28
SCFD1-212ENST00000554486 NFASCO94856 1347 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 CENPFP49454 3210 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 NPHP3-ACAD11A0A0J9YXS1 232 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 A0A1W2PQ27 194 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 A0A1W2PQ64 194 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 A0A1W2PQD8 194 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 C7orf72A4D263 438 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 FITM1A5D6W6 292 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 PP2D1A8MPX8 630 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 MARCH6O60337 910 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 PSPNO60542 156 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 MSCO60682 206 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 GAS7O60861 476 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 GGPS1O95749 300 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 CCNE2O96020 404 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 CYBAP13498 195 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 PAMP19021 973 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 CDC25AP30304 524 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 LONP1P36776 959 aaKnown RBP7.03□□□□□ -1.28
SCFD1-212ENST00000554486 ADCYAP1R1P41586 468 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 TECP42680 631 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 CTCFP49711 727 aaPredicted RBP7.03□□□□□ -1.28
SCFD1-212ENST00000554486 LBX1P52954 281 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 CHRNEQ04844 493 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 ARHGAP1Q07960 439 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 CACNB2Q08289 660 aaPredicted RBP7.03□□□□□ -1.28
SCFD1-212ENST00000554486 PPP2R5CQ13362 524 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 PDIA5Q14554 519 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 NR0B2Q15466 257 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 HSF5Q4G112 596 aaPredicted RBP7.03□□□□□ -1.28
SCFD1-212ENST00000554486 SPECC1Q5M775 1068 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 MAP3K21Q5TCX8 1036 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 MFSD14CQ5VZR4 134 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 ADALQ6DHV7 355 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 IQSEC1Q6DN90 963 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 KCNV1Q6PIU1 500 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 SHC4Q6S5L8 630 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 KCNT2Q6UVM3 1135 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 CYP2R1Q6VVX0 501 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 PPIL6Q8IXY8 311 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms