RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 LNX1Q8TBB1 728 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 ZNF483Q8TF39 744 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 HAS1Q92839 578 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 ARHGEF26Q96DR7 871 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 ACSBG1Q96GR2 724 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 RSRC1Q96IZ7 334 aaKnown RBP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 GPR101Q96P66 508 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 SPAG5Q96R06 1193 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 CRAMP1Q96RY5 1269 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 DHRS4Q9BTZ2 278 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 ASPSCR1Q9BZE9 553 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 EDEM3Q9BZQ6 932 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 KCTD10Q9H3F6 313 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 ECT2Q9H8V3 914 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 EBF2Q9HAK2 575 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 C6orf50Q9HD87 102 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 KCNMB3Q9NPA1 279 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 RIC8AQ9NPQ8 531 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 LUC7LQ9NQ29 371 aaKnown RBP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 ATP8A2Q9NTI2 1148 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 ZDHHC18Q9NUE0 388 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 INTS9Q9NV88 658 aaKnown RBP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 FGFR1OP2Q9NVK5 253 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 DNAJC17Q9NVM6 304 aaKnown RBP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 TAS2R14Q9NYV8 317 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 FRRS1LQ9P0K9 344 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 HDAC9Q9UKV0 1011 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 MAPRE3Q9UPY8 281 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 PCDHA2Q9Y5H9 948 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 RREB1Q92766 1687 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 ABCB11O95342 1321 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 RPTORQ8N122 1335 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 CCDC163A0A0D9SF12 145 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 TCRBV7S2A1N4TA0A589 114 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 ADARB2-AS1A8MUL3 147 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 RSPH10B2B2RC85 870 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 TCP11X1B4DZS4 312 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 SHISA8B8ZZ34 492 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 MEIS1O00470 390 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 CES2O00748 559 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 CLIC2O15247 247 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 RGS16O15492 202 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 DDX3YO15523 660 aaKnown RBP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 AKAP3O75969 853 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 GH1P01241 217 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 C6orf222P0C671 652 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 RSPH10BP0C881 870 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 GHRP10912 638 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 KRT13P13646 458 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 NQO1P15559 274 aaKnown RBP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 TAL1P17542 331 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 POLD1P28340 1107 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 RFC4P35249 363 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 HOXD13P35453 343 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 MMP13P45452 471 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 CRKLP46109 303 aaKnown RBP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 RPL21P46778 160 aaKnown RBP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 MARCKSL1P49006 195 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 GALCP54803 685 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 PSMC6P62333 389 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 DR1Q01658 176 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 GSTM4Q03013 218 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 TNIP1Q15025 636 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 ZKSCAN8Q15776 578 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 EXOC3L4Q17RC7 722 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 TMEM119Q4V9L6 283 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 SBK1Q52WX2 424 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 KRT79Q5XKE5 535 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 DENND2CQ68D51 928 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 DUPD1Q68J44 220 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 GALNT17Q6IS24 598 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 GDF6Q6KF10 455 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 ELMSAN1Q6PJG2 1045 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 TXNDC11Q6PKC3 985 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 LHFPL2Q6ZUX7 228 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 SLFN11Q7Z7L1 901 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 LRRTM3Q86VH5 581 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 TAX1BP1Q86VP1 789 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 GPBP1Q86WP2 473 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 CCDC25Q86WR0 208 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 PALB2Q86YC2 1186 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 DZIP1Q86YF9 867 aaKnown RBP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 ZDHHC14Q8IZN3 488 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 ZNF444Q8N0Y2 327 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 RASGEF1CQ8N431 466 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 ANKS4BQ8N8V4 417 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 CCDC26Q8TAB7 109 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 OLIG1Q8TAK6 271 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 GDAP1Q8TB36 358 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 SLC35G2Q8TBE7 412 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 PARD3BQ8TEW8 1205 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 TBC1D22AQ8WUA7 517 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 SEC14L1Q92503 715 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 TTC9Q92623 222 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 ALG3Q92685 438 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 ZNF622Q969S3 477 aaKnown RBP eCLIP2.74□□□□□ -1.971e-6■□□□□ 11.2
PRPF39-207ENST00000554439 CEP95Q96GE4 821 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 HES6Q96HZ4 224 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 DDX23Q9BUQ8 820 aaKnown RBP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 LGR4Q9BXB1 951 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms