RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 NPR1P16066 1061 aa6.32□□□□□ -1.4
SCFD1-211ENST00000554437 SLC7A1P30825 629 aa6.32□□□□□ -1.4
SCFD1-211ENST00000554437 KRTAP1-1Q07627 177 aa6.32□□□□□ -1.4
SCFD1-211ENST00000554437 PREPLQ4J6C6 727 aaPredicted RBP6.32□□□□□ -1.4
SCFD1-211ENST00000554437 DARS2Q6PI48 645 aaKnown RBP6.32□□□□□ -1.4
SCFD1-211ENST00000554437 COLGALT2Q8IYK4 626 aa6.32□□□□□ -1.4
SCFD1-211ENST00000554437 FAM46DQ8NEK8 389 aa6.32□□□□□ -1.4
SCFD1-211ENST00000554437 IL31RAQ8NI17 732 aa6.32□□□□□ -1.4
SCFD1-211ENST00000554437 NEU4Q8WWR8 484 aaPredicted RBP6.32□□□□□ -1.4
SCFD1-211ENST00000554437 TMEM125Q96AQ2 219 aa6.32□□□□□ -1.4
SCFD1-211ENST00000554437 WDR11Q9BZH6 1224 aa6.32□□□□□ -1.4
SCFD1-211ENST00000554437 SERHL2Q9H4I8 314 aa6.32□□□□□ -1.4
SCFD1-211ENST00000554437 GEMIN8Q9NWZ8 242 aaKnown RBP6.32□□□□□ -1.4
SCFD1-211ENST00000554437 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.32□□□□□ -1.4
SCFD1-211ENST00000554437 TESQ9UGI8 421 aaKnown RBP6.32□□□□□ -1.4
SCFD1-211ENST00000554437 A0A1W2PS29 197 aa6.31□□□□□ -1.4
SCFD1-211ENST00000554437 DNAJB5O75953 348 aa6.31□□□□□ -1.4
SCFD1-211ENST00000554437 SUN1O94901 812 aa6.31□□□□□ -1.4
SCFD1-211ENST00000554437 FSHBP01225 129 aa6.31□□□□□ -1.4
SCFD1-211ENST00000554437 HRGP04196 525 aa6.31□□□□□ -1.4
SCFD1-211ENST00000554437 RHCEP18577 417 aa6.31□□□□□ -1.4
SCFD1-211ENST00000554437 CHRM3P20309 590 aa6.31□□□□□ -1.4
SCFD1-211ENST00000554437 ANXA11P50995 505 aaKnown RBP6.31□□□□□ -1.4
SCFD1-211ENST00000554437 VAV2P52735 878 aa6.31□□□□□ -1.4
SCFD1-211ENST00000554437 RPS7P62081 194 aaKnown RBP6.31□□□□□ -1.4
SCFD1-211ENST00000554437 FAM193AP78312 1265 aa6.31□□□□□ -1.4
SCFD1-211ENST00000554437 RHDQ02161 417 aa6.31□□□□□ -1.4
SCFD1-211ENST00000554437 GALEQ14376 348 aa6.31□□□□□ -1.4
SCFD1-211ENST00000554437 CD300EQ496F6 205 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-211ENST00000554437 AMOTQ4VCS5 1084 aa6.31□□□□□ -1.4
SCFD1-211ENST00000554437 FAM160B1Q5W0V3 765 aa6.31□□□□□ -1.4
SCFD1-211ENST00000554437 C22orf23Q9BZE7 217 aa6.31□□□□□ -1.4
SCFD1-211ENST00000554437 UNKLQ9H9P5 680 aaKnown RBP6.31□□□□□ -1.4
SCFD1-211ENST00000554437 ETAA1Q9NY74 926 aa6.31□□□□□ -1.4
SCFD1-211ENST00000554437 TPCN1Q9ULQ1 816 aa6.31□□□□□ -1.4
SCFD1-211ENST00000554437 MED16Q9Y2X0 877 aa6.31□□□□□ -1.4
SCFD1-211ENST00000554437 TRGV11A0A075B6L2 103 aa6.3□□□□□ -1.4
SCFD1-211ENST00000554437 GRPP07492 148 aa6.3□□□□□ -1.4
SCFD1-211ENST00000554437 ITGAMP11215 1152 aa6.3□□□□□ -1.4
SCFD1-211ENST00000554437 PIM1P11309 404 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-211ENST00000554437 GDF5P43026 501 aa6.3□□□□□ -1.4
SCFD1-211ENST00000554437 MC2RQ01718 297 aa6.3□□□□□ -1.4
SCFD1-211ENST00000554437 DYRK1AQ13627 763 aa6.3□□□□□ -1.4
SCFD1-211ENST00000554437 TAF2Q6P1X5 1199 aa6.3□□□□□ -1.4
SCFD1-211ENST00000554437 APOA5Q6Q788 366 aa6.3□□□□□ -1.4
SCFD1-211ENST00000554437 ZNF783Q6ZMS7 281 aa6.3□□□□□ -1.4
SCFD1-211ENST00000554437 GPR149Q86SP6 731 aa6.3□□□□□ -1.4
SCFD1-211ENST00000554437 LCORLQ8N3X6 602 aa6.3□□□□□ -1.4
SCFD1-211ENST00000554437 PSD4Q8NDX1 1056 aa6.3□□□□□ -1.4
SCFD1-211ENST00000554437 OR6B3Q8NGW1 331 aa6.3□□□□□ -1.4
SCFD1-211ENST00000554437 POC1BQ8TC44 478 aa6.3□□□□□ -1.4
SCFD1-211ENST00000554437 KBTBD7Q8WVZ9 684 aa6.3□□□□□ -1.4
SCFD1-211ENST00000554437 ASB10Q8WXI3 467 aa6.3□□□□□ -1.4
SCFD1-211ENST00000554437 LRTOMTQ8WZ04 291 aa6.3□□□□□ -1.4
SCFD1-211ENST00000554437 SNX19Q92543 992 aa6.3□□□□□ -1.4
SCFD1-211ENST00000554437 LARP4BQ92615 738 aaKnown RBP6.3□□□□□ -1.4
SCFD1-211ENST00000554437 TTC17Q96AE7 1141 aa6.3□□□□□ -1.4
SCFD1-211ENST00000554437 TRIM54Q9BYV2 358 aa6.3□□□□□ -1.4
SCFD1-211ENST00000554437 BHMT2Q9H2M3 363 aa6.3□□□□□ -1.4
SCFD1-211ENST00000554437 TBCCD1Q9NVR7 557 aa6.3□□□□□ -1.4
SCFD1-211ENST00000554437 SRRDQ9UH36 339 aa6.3□□□□□ -1.4
SCFD1-211ENST00000554437 PLEKHM1Q9Y4G2 1056 aa6.3□□□□□ -1.4
SCFD1-211ENST00000554437 USP19O94966 1318 aa6.29□□□□□ -1.4
SCFD1-211ENST00000554437 E7ENX8 843 aa6.29□□□□□ -1.4
SCFD1-211ENST00000554437 GOLIM4O00461 696 aa6.29□□□□□ -1.4
SCFD1-211ENST00000554437 TBC1D4O60343 1298 aa6.29□□□□□ -1.4
SCFD1-211ENST00000554437 MGEA5O60502 916 aa6.29□□□□□ -1.4
SCFD1-211ENST00000554437 THP07101 528 aa6.29□□□□□ -1.4
SCFD1-211ENST00000554437 FDXRP22570 491 aa6.29□□□□□ -1.4
SCFD1-211ENST00000554437 PEX2P28328 305 aa6.29□□□□□ -1.4
SCFD1-211ENST00000554437 ZEB1P37275 1124 aaPredicted RBP6.29□□□□□ -1.4
SCFD1-211ENST00000554437 TAP2Q03519 686 aa6.29□□□□□ -1.4
SCFD1-211ENST00000554437 TCF15Q12870 199 aa6.29□□□□□ -1.4
SCFD1-211ENST00000554437 SP5Q6BEB4 398 aaPredicted RBP6.29□□□□□ -1.4
SCFD1-211ENST00000554437 CYB5RLQ6IPT4 315 aa6.29□□□□□ -1.4
SCFD1-211ENST00000554437 PPP1R32Q7Z5V6 425 aa6.29□□□□□ -1.4
SCFD1-211ENST00000554437 VRK3Q8IV63 474 aa6.29□□□□□ -1.4
SCFD1-211ENST00000554437 CCAR1Q8IX12 1150 aaKnown RBP6.29□□□□□ -1.4
SCFD1-211ENST00000554437 ADGRG5Q8IZF4 528 aa6.29□□□□□ -1.4
SCFD1-211ENST00000554437 FBXO41Q8TF61 875 aa6.29□□□□□ -1.4
SCFD1-211ENST00000554437 ANKS1AQ92625 1134 aa6.29□□□□□ -1.4
SCFD1-211ENST00000554437 PTCD3Q96EY7 689 aaKnown RBP6.29□□□□□ -1.4
SCFD1-211ENST00000554437 SMOC2Q9H3U7 446 aa6.29□□□□□ -1.4
SCFD1-211ENST00000554437 CYP4F11Q9HBI6 524 aa6.29□□□□□ -1.4
SCFD1-211ENST00000554437 PCDHGB6Q9Y5F9 930 aa6.29□□□□□ -1.4
SCFD1-211ENST00000554437 RAD54BQ9Y620 910 aa6.29□□□□□ -1.4
SCFD1-211ENST00000554437 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.28□□□□□ -1.4
SCFD1-211ENST00000554437 PIPSLA2A3N6 862 aa6.28□□□□□ -1.4
SCFD1-211ENST00000554437 MYO1CO00159 1063 aa6.28□□□□□ -1.4
SCFD1-211ENST00000554437 BTN3A1O00481 513 aa6.28□□□□□ -1.4
SCFD1-211ENST00000554437 EGR2P11161 476 aaPredicted RBP6.28□□□□□ -1.4
SCFD1-211ENST00000554437 EN2P19622 333 aaPredicted RBP6.28□□□□□ -1.4
SCFD1-211ENST00000554437 GNALP38405 381 aa6.28□□□□□ -1.4
SCFD1-211ENST00000554437 ARFIP2P53365 341 aa6.28□□□□□ -1.4
SCFD1-211ENST00000554437 SCAPQ12770 1279 aa6.28□□□□□ -1.4
SCFD1-211ENST00000554437 POLD3Q15054 466 aaPredicted RBP6.28□□□□□ -1.4
SCFD1-211ENST00000554437 CCDC181Q5TID7 509 aa6.28□□□□□ -1.4
SCFD1-211ENST00000554437 ABHD17BQ5VST6 288 aa6.28□□□□□ -1.4
SCFD1-211ENST00000554437 LMBRD2Q68DH5 695 aaPredicted RBP6.28□□□□□ -1.4
SCFD1-211ENST00000554437 MICALCLQ6ZW33 695 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms