RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 CFAP52Q8N1V2 620 aa6.09□□□□□ -1.43
ATXN3-225ENST00000554214 PDPRQ8NCN5 879 aa6.09□□□□□ -1.43
ATXN3-225ENST00000554214 TMIEQ8NEW7 156 aa6.09□□□□□ -1.43
ATXN3-225ENST00000554214 BRD9Q9H8M2 597 aa6.09□□□□□ -1.43
ATXN3-225ENST00000554214 GNL3LQ9NVN8 582 aaKnown RBP6.09□□□□□ -1.43
ATXN3-225ENST00000554214 IP6K2Q9UHH9 426 aa6.09□□□□□ -1.43
ATXN3-225ENST00000554214 CFAP74Q9C0B2 1584 aa6.09□□□□□ -1.43
ATXN3-225ENST00000554214 PTPRTO14522 1441 aa6.08□□□□□ -1.44
ATXN3-225ENST00000554214 PRAMEF33A0A0G2JMD5 474 aa6.08□□□□□ -1.44
ATXN3-225ENST00000554214 A0A1W2PS29 197 aa6.08□□□□□ -1.44
ATXN3-225ENST00000554214 PLEKHD1A6NEE1 506 aa6.08□□□□□ -1.44
ATXN3-225ENST00000554214 ZAR1LA6NP61 321 aa6.08□□□□□ -1.44
ATXN3-225ENST00000554214 PRAMEF10O60809 474 aa6.08□□□□□ -1.44
ATXN3-225ENST00000554214 DTNBO60941 627 aa6.08□□□□□ -1.44
ATXN3-225ENST00000554214 PPFIA2O75334 1257 aa6.08□□□□□ -1.44
ATXN3-225ENST00000554214 ARIH2O95376 493 aa6.08□□□□□ -1.44
ATXN3-225ENST00000554214 ANXA1P04083 346 aa6.08□□□□□ -1.44
ATXN3-225ENST00000554214 GJB1P08034 283 aa6.08□□□□□ -1.44
ATXN3-225ENST00000554214 KCNA2P16389 499 aa6.08□□□□□ -1.44
ATXN3-225ENST00000554214 GATA3P23771 443 aa6.08□□□□□ -1.44
ATXN3-225ENST00000554214 RPS7P62081 194 aaKnown RBP6.08□□□□□ -1.44
ATXN3-225ENST00000554214 DYRK1AQ13627 763 aa6.08□□□□□ -1.44
ATXN3-225ENST00000554214 CD300EQ496F6 205 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-225ENST00000554214 LNX2Q8N448 690 aa6.08□□□□□ -1.44
ATXN3-225ENST00000554214 AFAP1Q8N556 730 aa6.08□□□□□ -1.44
ATXN3-225ENST00000554214 SLC9A6Q92581 669 aa6.08□□□□□ -1.44
ATXN3-225ENST00000554214 TMEM125Q96AQ2 219 aa6.08□□□□□ -1.44
ATXN3-225ENST00000554214 HOOK2Q96ED9 719 aa6.08□□□□□ -1.44
ATXN3-225ENST00000554214 LRIG1Q96JA1 1093 aa6.08□□□□□ -1.44
ATXN3-225ENST00000554214 CRAMP1Q96RY5 1269 aa6.08□□□□□ -1.44
ATXN3-225ENST00000554214 SLAMF7Q9NQ25 335 aa6.08□□□□□ -1.44
ATXN3-225ENST00000554214 CTTNBP2NLQ9P2B4 639 aa6.08□□□□□ -1.44
ATXN3-225ENST00000554214 ANKRD6Q9Y2G4 727 aa6.08□□□□□ -1.44
ATXN3-225ENST00000554214 NEU2Q9Y3R4 380 aa6.08□□□□□ -1.44
ATXN3-225ENST00000554214 SAMD9Q5K651 1589 aa6.08□□□□□ -1.44
ATXN3-225ENST00000554214 ATP10AO60312 1499 aa6.08□□□□□ -1.44
ATXN3-225ENST00000554214 C9orf84Q5VXU9 1444 aa6.08□□□□□ -1.44
ATXN3-225ENST00000554214 CAMSAP1Q5T5Y3 1602 aa6.07□□□□□ -1.44
ATXN3-225ENST00000554214 SLC16A6O15403 523 aa6.07□□□□□ -1.44
ATXN3-225ENST00000554214 ALDH1L1O75891 902 aa6.07□□□□□ -1.44
ATXN3-225ENST00000554214 GNAI3P08754 354 aa6.07□□□□□ -1.44
ATXN3-225ENST00000554214 VCAM1P19320 739 aa6.07□□□□□ -1.44
ATXN3-225ENST00000554214 AKAP5P24588 427 aa6.07□□□□□ -1.44
ATXN3-225ENST00000554214 PRDX5P30044 214 aa6.07□□□□□ -1.44
ATXN3-225ENST00000554214 HK3P52790 923 aa6.07□□□□□ -1.44
ATXN3-225ENST00000554214 PSMC1P62191 440 aaKnown RBP6.07□□□□□ -1.44
ATXN3-225ENST00000554214 GNAI1P63096 354 aa6.07□□□□□ -1.44
ATXN3-225ENST00000554214 PIGFQ07326 219 aa6.07□□□□□ -1.44
ATXN3-225ENST00000554214 SF3B3Q15393 1217 aaKnown RBP6.07□□□□□ -1.44
ATXN3-225ENST00000554214 STRIP1Q5VSL9 837 aa6.07□□□□□ -1.44
ATXN3-225ENST00000554214 CATIPQ7Z7H3 387 aa6.07□□□□□ -1.44
ATXN3-225ENST00000554214 PDSS2Q86YH6 399 aa6.07□□□□□ -1.44
ATXN3-225ENST00000554214 C1orf43Q9BWL3 253 aa6.07□□□□□ -1.44
ATXN3-225ENST00000554214 TCF7L1Q9HCS4 588 aa6.07□□□□□ -1.44
ATXN3-225ENST00000554214 KCTD5Q9NXV2 234 aa6.07□□□□□ -1.44
ATXN3-225ENST00000554214 DDX56Q9NY93 547 aaKnown RBP6.07□□□□□ -1.44
ATXN3-225ENST00000554214 CCDC195A0A1B0GUA6 201 aa6.06□□□□□ -1.44
ATXN3-225ENST00000554214 PRSS29PA6NIE9 313 aa6.06□□□□□ -1.44
ATXN3-225ENST00000554214 SUN1O94901 812 aa6.06□□□□□ -1.44
ATXN3-225ENST00000554214 FTLP02792 175 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-225ENST00000554214 FTH1P19P0C7X4 201 aa6.06□□□□□ -1.44
ATXN3-225ENST00000554214 PHKA1P46020 1223 aa6.06□□□□□ -1.44
ATXN3-225ENST00000554214 ANXA11P50995 505 aaKnown RBP6.06□□□□□ -1.44
ATXN3-225ENST00000554214 FXR1P51114 621 aaKnown RBP eCLIP6.06□□□□□ -1.44
ATXN3-225ENST00000554214 MRPS35P82673 323 aaKnown RBP6.06□□□□□ -1.44
ATXN3-225ENST00000554214 NOGQ13253 232 aa6.06□□□□□ -1.44
ATXN3-225ENST00000554214 ZNF169Q14929 603 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-225ENST00000554214 PGS1Q32NB8 556 aa6.06□□□□□ -1.44
ATXN3-225ENST00000554214 PRR16Q569H4 304 aa6.06□□□□□ -1.44
ATXN3-225ENST00000554214 HEATR3Q7Z4Q2 680 aa6.06□□□□□ -1.44
ATXN3-225ENST00000554214 SH2D3CQ8N5H7 860 aa6.06□□□□□ -1.44
ATXN3-225ENST00000554214 SIMC1Q8NDZ2 872 aa6.06□□□□□ -1.44
ATXN3-225ENST00000554214 SSH3Q8TE77 659 aa6.06□□□□□ -1.44
ATXN3-225ENST00000554214 STAG1Q8WVM7 1258 aa6.06□□□□□ -1.44
ATXN3-225ENST00000554214 SCAMP4Q969E2 229 aa6.06□□□□□ -1.44
ATXN3-225ENST00000554214 RGMAQ96B86 450 aa6.06□□□□□ -1.44
ATXN3-225ENST00000554214 TRIB1Q96RU8 372 aa6.06□□□□□ -1.44
ATXN3-225ENST00000554214 GTPBP4Q9BZE4 634 aaKnown RBP6.06□□□□□ -1.44
ATXN3-225ENST00000554214 TYW1Q9NV66 732 aaKnown RBP6.06□□□□□ -1.44
ATXN3-225ENST00000554214 INTS13Q9NVM9 706 aa6.06□□□□□ -1.44
ATXN3-225ENST00000554214 CFAP97Q9P2B7 532 aa6.06□□□□□ -1.44
ATXN3-225ENST00000554214 LRIT1Q9P2V4 623 aa6.06□□□□□ -1.44
ATXN3-225ENST00000554214 ABCF2Q9UG63 623 aa6.06□□□□□ -1.44
ATXN3-225ENST00000554214 PRXQ9BXM0 1461 aa6.06□□□□□ -1.44
ATXN3-225ENST00000554214 NCOA1Q15788 1441 aa6.06□□□□□ -1.44
ATXN3-225ENST00000554214 MAGI2Q86UL8 1455 aa6.05□□□□□ -1.44
ATXN3-225ENST00000554214 LOC105371045A0A1W2PR82 267 aa6.05□□□□□ -1.44
ATXN3-225ENST00000554214 E9PLN8 166 aa6.05□□□□□ -1.44
ATXN3-225ENST00000554214 TOR1BO14657 336 aa6.05□□□□□ -1.44
ATXN3-225ENST00000554214 PEX1O43933 1283 aa6.05□□□□□ -1.44
ATXN3-225ENST00000554214 PDGFRBP09619 1106 aa6.05□□□□□ -1.44
ATXN3-225ENST00000554214 PF4V1P10720 104 aa6.05□□□□□ -1.44
ATXN3-225ENST00000554214 TYRP1P17643 537 aa6.05□□□□□ -1.44
ATXN3-225ENST00000554214 CLK3P49761 638 aaKnown RBP6.05□□□□□ -1.44
ATXN3-225ENST00000554214 RARRES1P49788 294 aa6.05□□□□□ -1.44
ATXN3-225ENST00000554214 MAP2K6P52564 334 aa6.05□□□□□ -1.44
ATXN3-225ENST00000554214 POU6F2P78424 691 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-225ENST00000554214 CCDC157Q569K6 752 aa6.05□□□□□ -1.44
ATXN3-225ENST00000554214 TAPT1Q6NXT6 567 aa6.05□□□□□ -1.44
ATXN3-225ENST00000554214 SLC30A10Q6XR72 485 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms