RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 PFKPQ01813 784 aa12.84□□□□□ -0.35
TRAPPC6B-204ENST00000554018 PLD1Q13393 1074 aa12.84□□□□□ -0.35
TRAPPC6B-204ENST00000554018 TEAD2Q15562 447 aa12.84□□□□□ -0.35
TRAPPC6B-204ENST00000554018 SLC39A12Q504Y0 691 aa12.84□□□□□ -0.35
TRAPPC6B-204ENST00000554018 WSCD1Q658N2 575 aa12.84□□□□□ -0.35
TRAPPC6B-204ENST00000554018 SCARA3Q6AZY7 606 aa12.84□□□□□ -0.35
TRAPPC6B-204ENST00000554018 BRSK2Q8IWQ3 736 aa12.84□□□□□ -0.35
TRAPPC6B-204ENST00000554018 LEMD2Q8NC56 503 aa12.84□□□□□ -0.35
TRAPPC6B-204ENST00000554018 PJA1Q8NG27 643 aa12.84□□□□□ -0.35
TRAPPC6B-204ENST00000554018 SHKBP1Q8TBC3 707 aa12.84□□□□□ -0.35
TRAPPC6B-204ENST00000554018 SMARCD2Q92925 531 aa12.84□□□□□ -0.35
TRAPPC6B-204ENST00000554018 ASB16Q96NS5 453 aa12.84□□□□□ -0.35
TRAPPC6B-204ENST00000554018 LRRC3Q9BY71 257 aa12.84□□□□□ -0.35
TRAPPC6B-204ENST00000554018 TNMDQ9H2S6 317 aa12.84□□□□□ -0.35
TRAPPC6B-204ENST00000554018 RBAKQ9NYW8 714 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC6B-204ENST00000554018 DLGAP2Q9P1A6 1054 aa12.84□□□□□ -0.35
TRAPPC6B-204ENST00000554018 DSEQ9UL01 958 aa12.84□□□□□ -0.35
TRAPPC6B-204ENST00000554018 MTF2Q9Y483 593 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC6B-204ENST00000554018 OBSL1O75147 1896 aa12.83□□□□□ -0.36
TRAPPC6B-204ENST00000554018 COL4A2P08572 1712 aa12.83□□□□□ -0.36
TRAPPC6B-204ENST00000554018 GPR179Q6PRD1 2367 aa12.83□□□□□ -0.36
TRAPPC6B-204ENST00000554018 KANSL1LA0AUZ9 987 aa12.83□□□□□ -0.36
TRAPPC6B-204ENST00000554018 KPNA7A9QM74 516 aa12.83□□□□□ -0.36
TRAPPC6B-204ENST00000554018 EXTL3O43909 919 aa12.83□□□□□ -0.36
TRAPPC6B-204ENST00000554018 F13A1P00488 732 aa12.83□□□□□ -0.36
TRAPPC6B-204ENST00000554018 CD72P21854 359 aa12.83□□□□□ -0.36
TRAPPC6B-204ENST00000554018 POLR2BP30876 1174 aaKnown RBP12.83□□□□□ -0.36
TRAPPC6B-204ENST00000554018 HOXD13P35453 343 aa12.83□□□□□ -0.36
TRAPPC6B-204ENST00000554018 PRKCQQ04759 706 aa12.83□□□□□ -0.36
TRAPPC6B-204ENST00000554018 PKP1Q13835 747 aa12.83□□□□□ -0.36
TRAPPC6B-204ENST00000554018 GRM2Q14416 872 aa12.83□□□□□ -0.36
TRAPPC6B-204ENST00000554018 SV2CQ496J9 727 aa12.83□□□□□ -0.36
TRAPPC6B-204ENST00000554018 DNAJB7Q7Z6W7 309 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC6B-204ENST00000554018 LRRTM3Q86VH5 581 aa12.83□□□□□ -0.36
TRAPPC6B-204ENST00000554018 METTL23Q86XA0 190 aa12.83□□□□□ -0.36
TRAPPC6B-204ENST00000554018 NT5DC4Q86YG4 428 aa12.83□□□□□ -0.36
TRAPPC6B-204ENST00000554018 TMC8Q8IU68 726 aa12.83□□□□□ -0.36
TRAPPC6B-204ENST00000554018 C1orf127Q8N9H9 656 aa12.83□□□□□ -0.36
TRAPPC6B-204ENST00000554018 IQUBQ8NA54 791 aa12.83□□□□□ -0.36
TRAPPC6B-204ENST00000554018 ZSCAN18Q8TBC5 510 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC6B-204ENST00000554018 DDX23Q9BUQ8 820 aaKnown RBP12.83□□□□□ -0.36
TRAPPC6B-204ENST00000554018 TRIM9Q9C026 710 aa12.83□□□□□ -0.36
TRAPPC6B-204ENST00000554018 LRRC27Q9C0I9 530 aa12.83□□□□□ -0.36
TRAPPC6B-204ENST00000554018 ZCWPW1Q9H0M4 648 aa12.83□□□□□ -0.36
TRAPPC6B-204ENST00000554018 TMEM206Q9H813 350 aa12.83□□□□□ -0.36
TRAPPC6B-204ENST00000554018 ZFP14Q9HCL3 533 aa12.83□□□□□ -0.36
TRAPPC6B-204ENST00000554018 PDE11AQ9HCR9 933 aa12.83□□□□□ -0.36
TRAPPC6B-204ENST00000554018 AGAP1Q9UPQ3 857 aa12.83□□□□□ -0.36
TRAPPC6B-204ENST00000554018 A0A1W2PRU2 124 aa12.82□□□□□ -0.36
TRAPPC6B-204ENST00000554018 POLR2DO15514 142 aaKnown RBP12.82□□□□□ -0.36
TRAPPC6B-204ENST00000554018 LDHAP00338 332 aaKnown RBP12.82□□□□□ -0.36
TRAPPC6B-204ENST00000554018 ITGB3P05106 788 aa12.82□□□□□ -0.36
TRAPPC6B-204ENST00000554018 KCNA4P22459 653 aa12.82□□□□□ -0.36
TRAPPC6B-204ENST00000554018 ASIC1P78348 528 aa12.82□□□□□ -0.36
TRAPPC6B-204ENST00000554018 UBXN2BQ14CS0 331 aa12.82□□□□□ -0.36
TRAPPC6B-204ENST00000554018 ASCL5Q7RTU5 278 aa12.82□□□□□ -0.36
TRAPPC6B-204ENST00000554018 GPIHBP1Q8IV16 184 aa12.82□□□□□ -0.36
TRAPPC6B-204ENST00000554018 THEM5Q8N1Q8 247 aa12.82□□□□□ -0.36
TRAPPC6B-204ENST00000554018 CXorf38Q8TB03 319 aa12.82□□□□□ -0.36
TRAPPC6B-204ENST00000554018 CACTINQ8WUQ7 758 aaKnown RBP12.82□□□□□ -0.36
TRAPPC6B-204ENST00000554018 ZNF560Q96MR9 790 aa12.82□□□□□ -0.36
TRAPPC6B-204ENST00000554018 SEPT5Q99719 369 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC6B-204ENST00000554018 LPIN3Q9BQK8 851 aa12.82□□□□□ -0.36
TRAPPC6B-204ENST00000554018 CUEDC2Q9H467 287 aa12.82□□□□□ -0.36
TRAPPC6B-204ENST00000554018 SLITRK6Q9H5Y7 841 aa12.82□□□□□ -0.36
TRAPPC6B-204ENST00000554018 ZNF334Q9HCZ1 680 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC6B-204ENST00000554018 PCDHA7Q9UN72 937 aa12.82□□□□□ -0.36
TRAPPC6B-204ENST00000554018 ASB3Q9Y575 518 aa12.82□□□□□ -0.36
TRAPPC6B-204ENST00000554018 CEP250Q9BV73 2442 aa12.82□□□□□ -0.36
TRAPPC6B-204ENST00000554018 GREB1Q4ZG55 1949 aa12.82□□□□□ -0.36
TRAPPC6B-204ENST00000554018 ATG2BQ96BY7 2078 aa12.81□□□□□ -0.36
TRAPPC6B-204ENST00000554018 PRR23AA6NEV1 266 aa12.81□□□□□ -0.36
TRAPPC6B-204ENST00000554018 FAM170BA6NMN3 283 aa12.81□□□□□ -0.36
TRAPPC6B-204ENST00000554018 CASP1P29466 404 aa12.81□□□□□ -0.36
TRAPPC6B-204ENST00000554018 PNPLA4P41247 253 aa12.81□□□□□ -0.36
TRAPPC6B-204ENST00000554018 ME1P48163 572 aa12.81□□□□□ -0.36
TRAPPC6B-204ENST00000554018 TUFMP49411 452 aaKnown RBP12.81□□□□□ -0.36
TRAPPC6B-204ENST00000554018 AMPD3Q01432 767 aa12.81□□□□□ -0.36
TRAPPC6B-204ENST00000554018 STXBP5Q5T5C0 1151 aa12.81□□□□□ -0.36
TRAPPC6B-204ENST00000554018 LMBRD2Q68DH5 695 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC6B-204ENST00000554018 CNNM4Q6P4Q7 775 aa12.81□□□□□ -0.36
TRAPPC6B-204ENST00000554018 VITQ6UXI7 678 aa12.81□□□□□ -0.36
TRAPPC6B-204ENST00000554018 TPRG1Q6ZUI0 275 aa12.81□□□□□ -0.36
TRAPPC6B-204ENST00000554018 STXBP4Q6ZWJ1 553 aa12.81□□□□□ -0.36
TRAPPC6B-204ENST00000554018 GAREM2Q75VX8 874 aa12.81□□□□□ -0.36
TRAPPC6B-204ENST00000554018 EPM2AIP1Q7L775 607 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC6B-204ENST00000554018 GPD1LQ8N335 351 aa12.81□□□□□ -0.36
TRAPPC6B-204ENST00000554018 PDCL2Q8N4E4 241 aa12.81□□□□□ -0.36
TRAPPC6B-204ENST00000554018 CSGALNACT2Q8N6G5 542 aa12.81□□□□□ -0.36
TRAPPC6B-204ENST00000554018 FAM200AQ8TCP9 573 aa12.81□□□□□ -0.36
TRAPPC6B-204ENST00000554018 KCNG4Q8TDN1 519 aa12.81□□□□□ -0.36
TRAPPC6B-204ENST00000554018 PSMG2Q969U7 264 aa12.81□□□□□ -0.36
TRAPPC6B-204ENST00000554018 RSPRY1Q96DX4 576 aa12.81□□□□□ -0.36
TRAPPC6B-204ENST00000554018 C7orf25Q9BPX7 421 aa12.81□□□□□ -0.36
TRAPPC6B-204ENST00000554018 TRMT61BQ9BVS5 477 aaKnown RBP12.81□□□□□ -0.36
TRAPPC6B-204ENST00000554018 BRD9Q9H8M2 597 aa12.81□□□□□ -0.36
TRAPPC6B-204ENST00000554018 TRPV4Q9HBA0 871 aa12.81□□□□□ -0.36
TRAPPC6B-204ENST00000554018 HEBP1Q9NRV9 189 aa12.81□□□□□ -0.36
TRAPPC6B-204ENST00000554018 HSFX1Q9UBD0 423 aa12.81□□□□□ -0.36
TRAPPC6B-204ENST00000554018 NCANO14594 1321 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms