RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 FAM47E-STBD1D6RA91 191 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 MATN2O00339 956 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 VWA5AO00534 786 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 ANP32CO43423 234 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 LPXNO60711 386 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 CDC14BO60729 498 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 SURF6O75683 361 aaKnown RBP3.8□□□□□ -1.8
SLIRP-202ENST00000553981 GNAI2P04899 355 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 ASGR1P07306 291 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 C1SP09871 688 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 PABPC1P11940 636 aaKnown RBP3.8□□□□□ -1.8
SLIRP-202ENST00000553981 EEF2P13639 858 aaKnown RBP3.8□□□□□ -1.8
SLIRP-202ENST00000553981 PDE6AP16499 860 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 ERCC5P28715 1186 aaPredicted RBP3.8□□□□□ -1.8
SLIRP-202ENST00000553981 ETV4P43268 484 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 SNAP25P60880 206 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 CNTN2Q02246 1040 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 FPGSQ05932 587 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 G3BP1Q13283 466 aaKnown RBP eCLIP3.8□□□□□ -1.8
SLIRP-202ENST00000553981 PLS1Q14651 629 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 TBR1Q16650 682 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 ZMAT1Q5H9K5 638 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 FAM83BQ5T0W9 1011 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 MFSD5Q6N075 450 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 CEP85Q6P2H3 762 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 TMCO2Q7Z6W1 182 aaPredicted RBP3.8□□□□□ -1.8
SLIRP-202ENST00000553981 AMER2Q8N7J2 671 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 SLC43A3Q8NBI5 491 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 ARHGAP45Q92619 1136 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 SCLYQ96I15 445 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 CTAGE1Q96RT6 745 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 TINF2Q9BSI4 451 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 LRFN3Q9BTN0 628 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 TRIM8Q9BZR9 551 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 API5Q9BZZ5 524 aaKnown RBP3.8□□□□□ -1.8
SLIRP-202ENST00000553981 PUS7LQ9H0K6 701 aaKnown RBP3.8□□□□□ -1.8
SLIRP-202ENST00000553981 VCPKMTQ9H867 229 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 ARMT1Q9H993 441 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 CERS4Q9HA82 394 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 IL1RAPL2Q9NP60 686 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 XPNPEP3Q9NQH7 507 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 INCENPQ9NQS7 918 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 PDGFCQ9NRA1 345 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 EXOC6BQ9Y2D4 811 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 TMX2Q9Y320 296 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 MYO9BQ13459 2157 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 COL4A4P53420 1690 aaPredicted RBP3.8□□□□□ -1.8
SLIRP-202ENST00000553981 MYH8P13535 1937 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 ATG2AQ2TAZ0 1938 aa3.8□□□□□ -1.8
SLIRP-202ENST00000553981 IGKV6D-41A0A0C4DH26 115 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 LCHNA4D1U4 455 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 FAM90A27PA6NNH2 459 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 KBTBD13C9JR72 458 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 FOXP2O15409 715 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 FLOT1O75955 427 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 BAG3O95817 575 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 HLA-DOAP06340 250 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 GNAI3P08754 354 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 CST5P28325 142 aaPredicted RBP3.79□□□□□ -1.8
SLIRP-202ENST00000553981 MCM7P33993 719 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 ADD2P35612 726 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 USP14P54578 494 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 CCL23P55773 120 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 PSMC6P62333 389 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 CCNA1P78396 465 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 PURAQ00577 322 aaKnown RBP3.79□□□□□ -1.8
SLIRP-202ENST00000553981 SMN1Q16637 294 aaKnown RBP3.79□□□□□ -1.8
SLIRP-202ENST00000553981 DDR2Q16832 855 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 GORABQ5T7V8 394 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 C12orf60Q5U649 245 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 BTBD8Q5XKL5 378 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 CTR9Q6PD62 1173 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 ATF7IPQ6VMQ6 1270 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 NSMFQ6X4W1 530 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 C16orf86Q6ZW13 317 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 OTOP2Q7RTS6 562 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 MCF2L2Q86YR7 1114 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 C1orf210Q8IVY1 113 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 ABRAQ8N0Z2 381 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 IL17DQ8TAD2 202 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 HERVK_113Q902F9 699 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 FRAT1Q92837 279 aaPredicted RBP3.79□□□□□ -1.8
SLIRP-202ENST00000553981 CHMP4CQ96CF2 233 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 SCYL1Q96KG9 808 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 OR14A2Q96R54 314 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 UHRF1Q96T88 793 aaPredicted RBP3.79□□□□□ -1.8
SLIRP-202ENST00000553981 FEZ1Q99689 392 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 ZDHHC5Q9C0B5 715 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 TANGO6Q9C0B7 1094 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 TRPV6Q9H1D0 765 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 UPF3AQ9H1J1 476 aaKnown RBP3.79□□□□□ -1.8
SLIRP-202ENST00000553981 IKZF4Q9H2S9 585 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 RAVER2Q9HCJ3 691 aaKnown RBP3.79□□□□□ -1.8
SLIRP-202ENST00000553981 STARD7Q9NQZ5 370 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 MCM9Q9NXL9 1143 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 R3HCC1Q9Y3T6 440 aaKnown RBP3.79□□□□□ -1.8
SLIRP-202ENST00000553981 NR2E1Q9Y466 385 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 MTCH2Q9Y6C9 303 aa3.79□□□□□ -1.8
SLIRP-202ENST00000553981 PRRC2BQ5JSZ5 2229 aaKnown RBP3.79□□□□□ -1.8
SLIRP-202ENST00000553981 DNAH12Q6ZR08 3092 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms