RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 NUP85Q9BW27 656 aa9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 TRIM31Q9BZY9 425 aa9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 PORCNQ9H237 461 aa9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 SLITRK6Q9H5Y7 841 aa9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 PRDM16Q9HAZ2 1276 aa9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.56□□□□□ -0.883e-7■■□□□ 11.7
AL049839.2-201ENST00000553947 ATXN10Q9UBB4 475 aa9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 PNMA3Q9UL41 463 aa9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 ATP8A1Q9Y2Q0 1164 aa9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 LRRC42Q9Y546 428 aa9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 PPP2R3BQ9Y5P8 575 aa9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 LRRIQ4A6NIV6 560 aa9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 H0YGN5 161 aa9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 EXTL3O43909 919 aa9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 GTF2H1P32780 548 aa9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 ARL2P36404 184 aa9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 MPP3Q13368 585 aa9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 RCN2Q14257 317 aa9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 SGSM1Q2NKQ1 1148 aa9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 LLGL2Q6P1M3 1020 aa9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 FAM47EQ6ZV65 393 aa9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 PHLDB2Q86SQ0 1253 aa9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 LCA5Q86VQ0 697 aa9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 GBP7Q8N8V2 638 aaPredicted RBP9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 DNERQ8NFT8 737 aa9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 ZNF564Q8TBZ8 553 aaPredicted RBP9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 PSPC1Q8WXF1 523 aaKnown RBP9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 GLG1Q92896 1179 aa9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 CD101Q93033 1021 aa9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 ZNF653Q96CK0 615 aa9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 DDX27Q96GQ7 796 aaKnown RBP9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 ZNF317Q96PQ6 595 aaPredicted RBP9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 ZSWIM1Q9BR11 485 aa9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 TARS2Q9BW92 718 aaKnown RBP9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 NFS1Q9Y697 457 aa9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 PTPRFP10586 1907 aa9.56□□□□□ -0.88
AL049839.2-201ENST00000553947 IGKV6D-21A0A0A0MT36 114 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 TCRBV7S2A1N4TA0A589 114 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 FARP2O94887 1054 aaPredicted RBP9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 VNN1O95497 513 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 C4BPAP04003 597 aaKnown RBP9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 CYP1A2P05177 515 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 CALB2P22676 271 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 PDE6CP51160 858 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 PTENP60484 403 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 RNASELQ05823 741 aaKnown RBP9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 CUL1Q13616 776 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 C2CD6Q53TS8 623 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 TDRD10Q5VZ19 366 aaKnown RBP9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 MOB2Q70IA6 237 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 ATP8B4Q8TF62 1192 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 UCMAQ8WVF2 138 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 SEC14L1Q92503 715 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 RNPEPL1Q9HAU8 725 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 DMAP1Q9NPF5 467 aaPredicted RBP9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 AGO2Q9UKV8 859 aaKnown RBP9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 MTA2O94776 668 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 HLA-DRAP01903 254 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 CFHP08603 1231 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 PYGMP11217 842 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 TNNI1P19237 187 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 CCNG1P51959 295 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 CLDN10P78369 228 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 PSMD6Q15008 389 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 LLGL1Q15334 1064 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 DNAJC14Q6Y2X3 702 aaPredicted RBP9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 GADL1Q6ZQY3 521 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 ZC3H18Q86VM9 953 aaKnown RBP9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 HOOK3Q86VS8 718 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 RIOX2Q8IUF8 465 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 CLMNQ96JQ2 1002 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 ANKFY1Q9P2R3 1169 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 FBXO40Q9UH90 709 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 PHF24Q9UPV7 400 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 DIS3Q9Y2L1 958 aaKnown RBP9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 USP15Q9Y4E8 981 aaPredicted RBP9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 STYXL1Q9Y6J8 313 aa9.55□□□□□ -0.88
AL049839.2-201ENST00000553947 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.54□□□□□ -0.88
AL049839.2-201ENST00000553947 RGS16O15492 202 aaPredicted RBP9.54□□□□□ -0.88
AL049839.2-201ENST00000553947 SSTR3P32745 418 aaPredicted RBP9.54□□□□□ -0.88
AL049839.2-201ENST00000553947 GCNT1Q02742 428 aa9.54□□□□□ -0.88
AL049839.2-201ENST00000553947 STRN3Q13033 797 aa9.54□□□□□ -0.88
AL049839.2-201ENST00000553947 LY6KQ17RY6 165 aa9.54□□□□□ -0.88
AL049839.2-201ENST00000553947 CLEC16AQ2KHT3 1053 aa9.54□□□□□ -0.88
AL049839.2-201ENST00000553947 ZACNQ401N2 412 aa9.54□□□□□ -0.88
AL049839.2-201ENST00000553947 CCNJLQ8IV13 435 aa9.54□□□□□ -0.88
AL049839.2-201ENST00000553947 C18orf8Q96DM3 657 aa9.54□□□□□ -0.88
AL049839.2-201ENST00000553947 NIFKQ9BYG3 293 aaKnown RBP9.54□□□□□ -0.88
AL049839.2-201ENST00000553947 SPATC1LQ9H0A9 340 aa9.54□□□□□ -0.88
AL049839.2-201ENST00000553947 ELP3Q9H9T3 547 aa9.54□□□□□ -0.88
AL049839.2-201ENST00000553947 APOBEC3GQ9HC16 384 aaKnown RBP9.54□□□□□ -0.88
AL049839.2-201ENST00000553947 LRRC4CQ9HCJ2 640 aa9.54□□□□□ -0.88
AL049839.2-201ENST00000553947 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.54□□□□□ -0.88
AL049839.2-201ENST00000553947 K7ERI5 159 aa9.54□□□□□ -0.88
AL049839.2-201ENST00000553947 ARIH2O95376 493 aa9.54□□□□□ -0.88
AL049839.2-201ENST00000553947 PGK2P07205 417 aa9.54□□□□□ -0.88
AL049839.2-201ENST00000553947 EDNRBP24530 442 aa9.54□□□□□ -0.88
AL049839.2-201ENST00000553947 CAPSQ13938 189 aa9.54□□□□□ -0.88
AL049839.2-201ENST00000553947 TARBP2Q15633 366 aaKnown RBP9.54□□□□□ -0.88
AL049839.2-201ENST00000553947 ACAD10Q6JQN1 1059 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms