RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 PAX3P23760 479 aa10.72□□□□□ -0.69
ACTN1-210ENST00000553779 CDC25CP30307 473 aa10.72□□□□□ -0.69
ACTN1-210ENST00000553779 TXLNAP40222 546 aa10.72□□□□□ -0.69
ACTN1-210ENST00000553779 CDR1P51861 262 aa10.72□□□□□ -0.69
ACTN1-210ENST00000553779 EPHA5P54756 1037 aa10.72□□□□□ -0.69
ACTN1-210ENST00000553779 SIM2Q14190 667 aaPredicted RBP10.72□□□□□ -0.69
ACTN1-210ENST00000553779 MCM6Q14566 821 aa10.72□□□□□ -0.69
ACTN1-210ENST00000553779 PTPAQ15257 358 aa10.72□□□□□ -0.69
ACTN1-210ENST00000553779 ARHGAP29Q52LW3 1261 aa10.72□□□□□ -0.69
ACTN1-210ENST00000553779 LAIR1Q6GTX8 287 aa10.72□□□□□ -0.69
ACTN1-210ENST00000553779 MAP4K3Q8IVH8 894 aa10.72□□□□□ -0.69
ACTN1-210ENST00000553779 TMEM130Q8N3G9 435 aa10.72□□□□□ -0.69
ACTN1-210ENST00000553779 KRI1Q8N9T8 703 aaKnown RBP10.72□□□□□ -0.69
ACTN1-210ENST00000553779 ZNF560Q96MR9 790 aa10.72□□□□□ -0.69
ACTN1-210ENST00000553779 TRPV4Q9HBA0 871 aa10.72□□□□□ -0.69
ACTN1-210ENST00000553779 ABI2Q9NYB9 513 aaPredicted RBP10.72□□□□□ -0.69
ACTN1-210ENST00000553779 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.72□□□□□ -0.69
ACTN1-210ENST00000553779 THADAQ6YHU6 1953 aa10.72□□□□□ -0.69
ACTN1-210ENST00000553779 VPS37CA5D8V6 355 aaPredicted RBP10.71□□□□□ -0.69
ACTN1-210ENST00000553779 PPEF2O14830 753 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 LILRB5O75023 590 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 MOSPD3O75425 235 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 NMT1P30419 496 aaKnown RBP10.71□□□□□ -0.69
ACTN1-210ENST00000553779 AVPR1AP37288 418 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 SOX9P48436 509 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 TUFMP49411 452 aaKnown RBP10.71□□□□□ -0.69
ACTN1-210ENST00000553779 ACOT2P49753 483 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 TAF6P49848 677 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 LILRA4P59901 499 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 CYP4F8P98187 520 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 PLCB2Q00722 1185 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 TSPY1Q01534 308 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 SATB1Q01826 763 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 SPEM2Q0P670 501 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 BFSP1Q12934 665 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 KARSQ15046 597 aaKnown RBP10.71□□□□□ -0.69
ACTN1-210ENST00000553779 SV2CQ496J9 727 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 DGKKQ5KSL6 1271 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 STXBP5Q5T5C0 1151 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 SPATA1Q5VX52 437 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 C9orf57Q5W0N0 161 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 LARP1BQ659C4 914 aaKnown RBP10.71□□□□□ -0.69
ACTN1-210ENST00000553779 SLFN12LQ6IEE8 588 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 CENPPQ6IPU0 288 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 KIAA1549LQ6ZVL6 1849 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 DNAJB7Q7Z6W7 309 aaPredicted RBP10.71□□□□□ -0.69
ACTN1-210ENST00000553779 ARID3BQ8IVW6 561 aaPredicted RBP10.71□□□□□ -0.69
ACTN1-210ENST00000553779 SPEM1Q8N4L4 309 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 TTC9BQ8N6N2 239 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 CELF5Q8N6W0 485 aaKnown RBP10.71□□□□□ -0.69
ACTN1-210ENST00000553779 ATAD1Q8NBU5 361 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 POMGNT1Q8WZA1 660 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 LARP4BQ92615 738 aaKnown RBP10.71□□□□□ -0.69
ACTN1-210ENST00000553779 RAD54LQ92698 747 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 PSMG2Q969U7 264 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 TMX3Q96JJ7 454 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 ZFYVE19Q96K21 471 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 LPIN3Q9BQK8 851 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 HAPLN2Q9GZV7 340 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 TRPV5Q9NQA5 729 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 AGO2Q9UKV8 859 aaKnown RBP10.71□□□□□ -0.69
ACTN1-210ENST00000553779 DERAQ9Y315 318 aa10.71□□□□□ -0.69
ACTN1-210ENST00000553779 MYOFQ9NZM1 2061 aa10.7□□□□□ -0.7
ACTN1-210ENST00000553779 PTPRDP23468 1912 aa10.7□□□□□ -0.7
ACTN1-210ENST00000553779 A0A0B4J269 797 aa10.7□□□□□ -0.7
ACTN1-210ENST00000553779 CHURC1-FNTBB4DL54 471 aa10.7□□□□□ -0.7
ACTN1-210ENST00000553779 SPECC1L-ADORA2AF8WAN1 911 aa10.7□□□□□ -0.7
ACTN1-210ENST00000553779 NRG2O14511 850 aaPredicted RBP10.7□□□□□ -0.7
ACTN1-210ENST00000553779 CYB561D2O14569 222 aa10.7□□□□□ -0.7
ACTN1-210ENST00000553779 CTHP32929 405 aa10.7□□□□□ -0.7
ACTN1-210ENST00000553779 LONP1P36776 959 aaKnown RBP10.7□□□□□ -0.7
ACTN1-210ENST00000553779 FNTBP49356 437 aa10.7□□□□□ -0.7
ACTN1-210ENST00000553779 AARSP49588 968 aaKnown RBP eCLIP10.7□□□□□ -0.7
ACTN1-210ENST00000553779 MCM2P49736 904 aa10.7□□□□□ -0.7
ACTN1-210ENST00000553779 PON2Q15165 354 aa10.7□□□□□ -0.7
ACTN1-210ENST00000553779 ITPRIPL2Q3MIP1 535 aa10.7□□□□□ -0.7
ACTN1-210ENST00000553779 ARSHQ5FYA8 562 aa10.7□□□□□ -0.7
ACTN1-210ENST00000553779 CC2D1AQ6P1N0 951 aaPredicted RBP10.7□□□□□ -0.7
ACTN1-210ENST00000553779 BRAPQ7Z569 592 aa10.7□□□□□ -0.7
ACTN1-210ENST00000553779 RALGPS2Q86X27 583 aaPredicted RBP10.7□□□□□ -0.7
ACTN1-210ENST00000553779 TMC8Q8IU68 726 aa10.7□□□□□ -0.7
ACTN1-210ENST00000553779 DCP1BQ8IZD4 617 aaKnown RBP10.7□□□□□ -0.7
ACTN1-210ENST00000553779 SYCP3Q8IZU3 236 aa10.7□□□□□ -0.7
ACTN1-210ENST00000553779 BPIFB1Q8TDL5 484 aa10.7□□□□□ -0.7
ACTN1-210ENST00000553779 GIPC2Q8TF65 315 aa10.7□□□□□ -0.7
ACTN1-210ENST00000553779 C2orf15Q8WU43 125 aaKnown RBP10.7□□□□□ -0.7
ACTN1-210ENST00000553779 TMEM209Q96SK2 561 aa10.7□□□□□ -0.7
ACTN1-210ENST00000553779 DNAJC25Q9H1X3 360 aa10.7□□□□□ -0.7
ACTN1-210ENST00000553779 CRISPLD1Q9H336 500 aa10.7□□□□□ -0.7
ACTN1-210ENST00000553779 MRPL44Q9H9J2 332 aaKnown RBP10.7□□□□□ -0.7
ACTN1-210ENST00000553779 RBM12Q9NTZ6 932 aaKnown RBP10.7□□□□□ -0.7
ACTN1-210ENST00000553779 DPP3Q9NY33 737 aa10.7□□□□□ -0.7
ACTN1-210ENST00000553779 DLL3Q9NYJ7 618 aa10.7□□□□□ -0.7
ACTN1-210ENST00000553779 CCDC39Q9UFE4 941 aa10.7□□□□□ -0.7
ACTN1-210ENST00000553779 MAGED2Q9UNF1 606 aaPredicted RBP10.7□□□□□ -0.7
ACTN1-210ENST00000553779 EXOC7Q9UPT5 735 aa10.7□□□□□ -0.7
ACTN1-210ENST00000553779 PI4KAP42356 2102 aa10.7□□□□□ -0.7
ACTN1-210ENST00000553779 MYO18AQ92614 2054 aaKnown RBP10.7□□□□□ -0.7
ACTN1-210ENST00000553779 CLSTN1O94985 981 aa10.69□□□□□ -0.7
ACTN1-210ENST00000553779 IL18RAPO95256 599 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms