RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 SLAMF7Q9NQ25 335 aa5.2□□□□□ -1.58
SCFD1-210ENST00000553693 ASB6Q9NWX5 421 aa5.2□□□□□ -1.58
SCFD1-210ENST00000553693 ARPP21Q9UBL0 812 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-210ENST00000553693 GCOM1H8Y6P7 765 aaPredicted RBP5.19□□□□□ -1.58
SCFD1-210ENST00000553693 TRIAP1O43715 76 aa5.19□□□□□ -1.58
SCFD1-210ENST00000553693 GNAI2P04899 355 aa5.19□□□□□ -1.58
SCFD1-210ENST00000553693 CHRM2P08172 466 aa5.19□□□□□ -1.58
SCFD1-210ENST00000553693 WT1P19544 449 aaPredicted RBP5.19□□□□□ -1.58
SCFD1-210ENST00000553693 NDUFV1P49821 464 aa5.19□□□□□ -1.58
SCFD1-210ENST00000553693 NOGQ13253 232 aa5.19□□□□□ -1.58
SCFD1-210ENST00000553693 KIF22Q14807 665 aa5.19□□□□□ -1.58
SCFD1-210ENST00000553693 TXNRD1Q16881 649 aa5.19□□□□□ -1.58
SCFD1-210ENST00000553693 FAM9AQ8IZU1 332 aaPredicted RBP5.19□□□□□ -1.58
SCFD1-210ENST00000553693 DDX17Q92841 729 aaKnown RBP5.19□□□□□ -1.58
SCFD1-210ENST00000553693 FAM167AQ96KS9 214 aa5.19□□□□□ -1.58
SCFD1-210ENST00000553693 OSBPL9Q96SU4 736 aa5.19□□□□□ -1.58
SCFD1-210ENST00000553693 ALG8Q9BVK2 526 aa5.19□□□□□ -1.58
SCFD1-210ENST00000553693 CPNE5Q9HCH3 593 aa5.19□□□□□ -1.58
SCFD1-210ENST00000553693 HOMER2Q9NSB8 354 aa5.19□□□□□ -1.58
SCFD1-210ENST00000553693 KLC4Q9NSK0 619 aa5.19□□□□□ -1.58
SCFD1-210ENST00000553693 ETAA1Q9NY74 926 aa5.19□□□□□ -1.58
SCFD1-210ENST00000553693 ZDHHC8Q9ULC8 765 aa5.19□□□□□ -1.58
SCFD1-210ENST00000553693 ARHGEF17Q96PE2 2063 aaPredicted RBP5.19□□□□□ -1.58
SCFD1-210ENST00000553693 LRRC14BA6NHZ5 514 aa5.18□□□□□ -1.58
SCFD1-210ENST00000553693 LRRC3CA6NJW4 275 aa5.18□□□□□ -1.58
SCFD1-210ENST00000553693 ADM5C9JUS6 153 aa5.18□□□□□ -1.58
SCFD1-210ENST00000553693 F5H697 171 aa5.18□□□□□ -1.58
SCFD1-210ENST00000553693 URI1O94763 535 aaPredicted RBP5.18□□□□□ -1.58
SCFD1-210ENST00000553693 FTLP02792 175 aaPredicted RBP5.18□□□□□ -1.58
SCFD1-210ENST00000553693 ITGALP20701 1170 aa5.18□□□□□ -1.58
SCFD1-210ENST00000553693 PDCP20941 246 aa5.18□□□□□ -1.58
SCFD1-210ENST00000553693 PRDX5P30044 214 aa5.18□□□□□ -1.58
SCFD1-210ENST00000553693 HABP2Q14520 560 aaPredicted RBP5.18□□□□□ -1.58
SCFD1-210ENST00000553693 TSTD2Q5T7W7 516 aa5.18□□□□□ -1.58
SCFD1-210ENST00000553693 TSHZ1Q6ZSZ6 1077 aa5.18□□□□□ -1.58
SCFD1-210ENST00000553693 HEATR3Q7Z4Q2 680 aa5.18□□□□□ -1.58
SCFD1-210ENST00000553693 PSD4Q8NDX1 1056 aa5.18□□□□□ -1.58
SCFD1-210ENST00000553693 CHMP4CQ96CF2 233 aa5.18□□□□□ -1.58
SCFD1-210ENST00000553693 LRIG1Q96JA1 1093 aa5.18□□□□□ -1.58
SCFD1-210ENST00000553693 PBKQ96KB5 322 aa5.18□□□□□ -1.58
SCFD1-210ENST00000553693 TINAGL1Q9GZM7 467 aaPredicted RBP5.18□□□□□ -1.58
SCFD1-210ENST00000553693 KMT5AQ9NQR1 393 aa5.18□□□□□ -1.58
SCFD1-210ENST00000553693 IL17RBQ9NRM6 502 aa5.18□□□□□ -1.58
SCFD1-210ENST00000553693 FRMD4BQ9Y2L6 1034 aa5.18□□□□□ -1.58
SCFD1-210ENST00000553693 NR2E3Q9Y5X4 410 aa5.18□□□□□ -1.58
SCFD1-210ENST00000553693 RBMXL2O75526 392 aaKnown RBP5.17□□□□□ -1.58
SCFD1-210ENST00000553693 IL33O95760 270 aa5.17□□□□□ -1.58
SCFD1-210ENST00000553693 VCAM1P19320 739 aa5.17□□□□□ -1.58
SCFD1-210ENST00000553693 LPOP22079 712 aaPredicted RBP5.17□□□□□ -1.58
SCFD1-210ENST00000553693 HK3P52790 923 aa5.17□□□□□ -1.58
SCFD1-210ENST00000553693 TCF15Q12870 199 aa5.17□□□□□ -1.58
SCFD1-210ENST00000553693 FAM153CQ494X1 144 aa5.17□□□□□ -1.58
SCFD1-210ENST00000553693 USP45Q70EL2 814 aa5.17□□□□□ -1.58
SCFD1-210ENST00000553693 PTF1AQ7RTS3 328 aa5.17□□□□□ -1.58
SCFD1-210ENST00000553693 BHLHA9Q7RTU4 235 aa5.17□□□□□ -1.58
SCFD1-210ENST00000553693 ZBTB46Q86UZ6 589 aa5.17□□□□□ -1.58
SCFD1-210ENST00000553693 FAM90A1Q86YD7 464 aa5.17□□□□□ -1.58
SCFD1-210ENST00000553693 TPSD1Q9BZJ3 242 aa5.17□□□□□ -1.58
SCFD1-210ENST00000553693 BRINP2Q9C0B6 783 aa5.17□□□□□ -1.58
SCFD1-210ENST00000553693 ABCF2Q9UG63 623 aa5.17□□□□□ -1.58
SCFD1-210ENST00000553693 PCDHA3Q9Y5H8 950 aa5.17□□□□□ -1.58
SCFD1-210ENST00000553693 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.16□□□□□ -1.58
SCFD1-210ENST00000553693 WDR27A2RRH5 827 aa5.16□□□□□ -1.58
SCFD1-210ENST00000553693 LINC00473A8K010 186 aa5.16□□□□□ -1.58
SCFD1-210ENST00000553693 TTLL1O95922 423 aa5.16□□□□□ -1.58
SCFD1-210ENST00000553693 IBSPP21815 317 aaPredicted RBP5.16□□□□□ -1.58
SCFD1-210ENST00000553693 PLAC9Q5JTB6 97 aa5.16□□□□□ -1.58
SCFD1-210ENST00000553693 TEDDM1Q5T9Z0 273 aa5.16□□□□□ -1.58
SCFD1-210ENST00000553693 TAF2Q6P1X5 1199 aa5.16□□□□□ -1.58
SCFD1-210ENST00000553693 SLC30A10Q6XR72 485 aa5.16□□□□□ -1.58
SCFD1-210ENST00000553693 PRR18Q8N4B5 295 aa5.16□□□□□ -1.58
SCFD1-210ENST00000553693 CPA6Q8N4T0 437 aa5.16□□□□□ -1.58
SCFD1-210ENST00000553693 TNPO1Q92973 898 aaKnown RBP5.16□□□□□ -1.58
SCFD1-210ENST00000553693 FKBP10Q96AY3 582 aa5.16□□□□□ -1.58
SCFD1-210ENST00000553693 HSPBAP1Q96EW2 488 aa5.16□□□□□ -1.58
SCFD1-210ENST00000553693 HAPLN3Q96S86 360 aa5.16□□□□□ -1.58
SCFD1-210ENST00000553693 C1orf43Q9BWL3 253 aa5.16□□□□□ -1.58
SCFD1-210ENST00000553693 ACTRT3Q9BYD9 372 aa5.16□□□□□ -1.58
SCFD1-210ENST00000553693 LMBRD1Q9NUN5 540 aa5.16□□□□□ -1.58
SCFD1-210ENST00000553693 LUC7L2Q9Y383 392 aaKnown RBP5.16□□□□□ -1.58
SCFD1-210ENST00000553693 WNT6Q9Y6F9 365 aa5.16□□□□□ -1.58
SCFD1-210ENST00000553693 ADGRA2Q96PE1 1338 aa5.16□□□□□ -1.58
SCFD1-210ENST00000553693 KAT6AQ92794 2004 aa5.15□□□□□ -1.58
SCFD1-210ENST00000553693 NXPH3O95157 252 aa5.15□□□□□ -1.59
SCFD1-210ENST00000553693 CD6P30203 668 aa5.15□□□□□ -1.59
SCFD1-210ENST00000553693 RGS19P49795 217 aa5.15□□□□□ -1.59
SCFD1-210ENST00000553693 HNRNPMP52272 730 aaKnown RBP eCLIP5.15□□□□□ -1.591e-6■■■□□ 16.6
SCFD1-210ENST00000553693 PTPROQ16827 1216 aa5.15□□□□□ -1.59
SCFD1-210ENST00000553693 PGS1Q32NB8 556 aa5.15□□□□□ -1.59
SCFD1-210ENST00000553693 BRDTQ58F21 947 aaPredicted RBP5.15□□□□□ -1.59
SCFD1-210ENST00000553693 RBM20Q5T481 1227 aaKnown RBP5.15□□□□□ -1.59
SCFD1-210ENST00000553693 ZNF788Q6ZQV5 615 aa5.15□□□□□ -1.59
SCFD1-210ENST00000553693 PPP1R32Q7Z5V6 425 aa5.15□□□□□ -1.59
SCFD1-210ENST00000553693 PUS7Q96PZ0 661 aaKnown RBP5.15□□□□□ -1.59
SCFD1-210ENST00000553693 NUP88Q99567 741 aaPredicted RBP5.15□□□□□ -1.59
SCFD1-210ENST00000553693 MRPL46Q9H2W6 279 aaKnown RBP5.15□□□□□ -1.59
SCFD1-210ENST00000553693 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.15□□□□□ -1.59
SCFD1-210ENST00000553693 EHD3Q9NZN3 535 aa5.15□□□□□ -1.59
SCFD1-210ENST00000553693 RAD54BQ9Y620 910 aa5.15□□□□□ -1.59
SCFD1-210ENST00000553693 PRSS29PA6NIE9 313 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms