RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 FOXQ1Q9C009 403 aa17.28■□□□□ 0.36
ACTN1-209ENST00000553659 OLFML3Q9NRN5 406 aa17.28■□□□□ 0.36
ACTN1-209ENST00000553659 MTRRQ9UBK8 725 aa17.28■□□□□ 0.36
ACTN1-209ENST00000553659 ODF2LQ9ULJ1 636 aa17.28■□□□□ 0.36
ACTN1-209ENST00000553659 PATJQ8NI35 1801 aa17.28■□□□□ 0.36
ACTN1-209ENST00000553659 GVINP1Q7Z2Y8 2422 aa17.27■□□□□ 0.36
ACTN1-209ENST00000553659 KANSL1LA0AUZ9 987 aa17.27■□□□□ 0.36
ACTN1-209ENST00000553659 B3GAT3O94766 335 aa17.27■□□□□ 0.36
ACTN1-209ENST00000553659 GLULP15104 373 aa17.27■□□□□ 0.36
ACTN1-209ENST00000553659 EFNA5P52803 228 aa17.27■□□□□ 0.36
ACTN1-209ENST00000553659 PPP2R3AQ06190 1150 aa17.27■□□□□ 0.36
ACTN1-209ENST00000553659 MAN2A1Q16706 1144 aa17.27■□□□□ 0.36
ACTN1-209ENST00000553659 BMT2Q1RMZ1 405 aa17.27■□□□□ 0.36
ACTN1-209ENST00000553659 TSR1Q2NL82 804 aaKnown RBP17.27■□□□□ 0.36
ACTN1-209ENST00000553659 ARSHQ5FYA8 562 aa17.27■□□□□ 0.36
ACTN1-209ENST00000553659 FIGNQ5HY92 759 aa17.27■□□□□ 0.36
ACTN1-209ENST00000553659 E4F1Q66K89 784 aaPredicted RBP17.27■□□□□ 0.36
ACTN1-209ENST00000553659 NYAP1Q6ZVC0 841 aa17.27■□□□□ 0.36
ACTN1-209ENST00000553659 TMTC1Q8IUR5 882 aa17.27■□□□□ 0.36
ACTN1-209ENST00000553659 CREBRFQ8IUR6 639 aa17.27■□□□□ 0.36
ACTN1-209ENST00000553659 ZNF507Q8TCN5 953 aa17.27■□□□□ 0.36
ACTN1-209ENST00000553659 IFT74Q96LB3 600 aa17.27■□□□□ 0.36
ACTN1-209ENST00000553659 PPP1R10Q96QC0 940 aaKnown RBP17.27■□□□□ 0.36
ACTN1-209ENST00000553659 DDX23Q9BUQ8 820 aaKnown RBP17.27■□□□□ 0.36
ACTN1-209ENST00000553659 BHMT2Q9H2M3 363 aa17.27■□□□□ 0.36
ACTN1-209ENST00000553659 DNMT3BQ9UBC3 853 aaKnown RBP17.27■□□□□ 0.36
ACTN1-209ENST00000553659 EIF3DO15371 548 aaKnown RBP eCLIP17.26■□□□□ 0.35
ACTN1-209ENST00000553659 TRAPPC3O43617 180 aa17.26■□□□□ 0.35
ACTN1-209ENST00000553659 CALUO43852 315 aaPredicted RBP17.26■□□□□ 0.35
ACTN1-209ENST00000553659 IGFBP6P24592 240 aaPredicted RBP17.26■□□□□ 0.35
ACTN1-209ENST00000553659 CLCNKBP51801 687 aa17.26■□□□□ 0.35
ACTN1-209ENST00000553659 PFKPQ01813 784 aa17.26■□□□□ 0.35
ACTN1-209ENST00000553659 PRKCQQ04759 706 aa17.26■□□□□ 0.35
ACTN1-209ENST00000553659 MLF2Q15773 248 aaPredicted RBP17.26■□□□□ 0.35
ACTN1-209ENST00000553659 UPP1Q16831 310 aa17.26■□□□□ 0.35
ACTN1-209ENST00000553659 PABPC1LQ4VXU2 614 aaKnown RBP17.26■□□□□ 0.35
ACTN1-209ENST00000553659 ZCWPW2Q504Y3 356 aa17.26■□□□□ 0.35
ACTN1-209ENST00000553659 SLC44A4Q53GD3 710 aa17.26■□□□□ 0.35
ACTN1-209ENST00000553659 ATF7IP2Q5U623 682 aa17.26■□□□□ 0.35
ACTN1-209ENST00000553659 CEP135Q66GS9 1140 aa17.26■□□□□ 0.35
ACTN1-209ENST00000553659 CD300LGQ6UXG3 332 aa17.26■□□□□ 0.35
ACTN1-209ENST00000553659 APBB1IPQ7Z5R6 666 aaPredicted RBP17.26■□□□□ 0.35
ACTN1-209ENST00000553659 TMEM139Q8IV31 216 aa17.26■□□□□ 0.35
ACTN1-209ENST00000553659 ZC3H3Q8IXZ2 948 aaKnown RBP17.26■□□□□ 0.35
ACTN1-209ENST00000553659 KIFAP3Q92845 792 aa17.26■□□□□ 0.35
ACTN1-209ENST00000553659 UROC1Q96N76 676 aa17.26■□□□□ 0.35
ACTN1-209ENST00000553659 ERGIC2Q96RQ1 377 aa17.26■□□□□ 0.35
ACTN1-209ENST00000553659 HCFC1R1Q9NWW0 138 aa17.26■□□□□ 0.35
ACTN1-209ENST00000553659 BACE2Q9Y5Z0 518 aa17.26■□□□□ 0.35
ACTN1-209ENST00000553659 CDY1Q9Y6F8 540 aa17.26■□□□□ 0.35
ACTN1-209ENST00000553659 DMDP11532 3685 aa17.26■□□□□ 0.35
ACTN1-209ENST00000553659 EP300Q09472 2414 aaPredicted RBP17.26■□□□□ 0.35
ACTN1-209ENST00000553659 K7ERI5 159 aa17.25■□□□□ 0.35
ACTN1-209ENST00000553659 PES1O00541 588 aaKnown RBP17.25■□□□□ 0.35
ACTN1-209ENST00000553659 LRRN2O75325 713 aa17.25■□□□□ 0.35
ACTN1-209ENST00000553659 FAM13AO94988 1023 aa17.25■□□□□ 0.35
ACTN1-209ENST00000553659 GYPCP04921 128 aa17.25■□□□□ 0.35
ACTN1-209ENST00000553659 GUCY2CP25092 1073 aa17.25■□□□□ 0.35
ACTN1-209ENST00000553659 MARSP56192 900 aaKnown RBP17.25■□□□□ 0.35
ACTN1-209ENST00000553659 VWA3BQ502W6 1294 aa17.25■□□□□ 0.35
ACTN1-209ENST00000553659 GLRA4Q5JXX5 417 aa17.25■□□□□ 0.35
ACTN1-209ENST00000553659 RINT1Q6NUQ1 792 aa17.25■□□□□ 0.35
ACTN1-209ENST00000553659 RSPO2Q6UXX9 243 aaPredicted RBP17.25■□□□□ 0.35
ACTN1-209ENST00000553659 ANKS3Q6ZW76 656 aa17.25■□□□□ 0.35
ACTN1-209ENST00000553659 NPAS3Q8IXF0 933 aa17.25■□□□□ 0.35
ACTN1-209ENST00000553659 MAML2Q8IZL2 1156 aaPredicted RBP17.25■□□□□ 0.35
ACTN1-209ENST00000553659 ZNF397Q8NF99 534 aaPredicted RBP17.25■□□□□ 0.35
ACTN1-209ENST00000553659 PPP1R13BQ96KQ4 1090 aa17.25■□□□□ 0.35
ACTN1-209ENST00000553659 C16orf45Q96MC5 204 aaPredicted RBP17.25■□□□□ 0.35
ACTN1-209ENST00000553659 REEP2Q9BRK0 252 aa17.25■□□□□ 0.35
ACTN1-209ENST00000553659 KIFC3Q9BVG8 833 aa17.25■□□□□ 0.35
ACTN1-209ENST00000553659 BCO2Q9BYV7 579 aa17.25■□□□□ 0.35
ACTN1-209ENST00000553659 OSBPL6Q9BZF3 934 aa17.25■□□□□ 0.35
ACTN1-209ENST00000553659 POLD4Q9HCU8 107 aa17.25■□□□□ 0.35
ACTN1-209ENST00000553659 TRAF3IP3Q9Y228 551 aa17.25■□□□□ 0.35
ACTN1-209ENST00000553659 COL4A3Q01955 1670 aa17.25■□□□□ 0.35
ACTN1-209ENST00000553659 MYH11P35749 1972 aa17.24■□□□□ 0.35
ACTN1-209ENST00000553659 SMIM28A0A1B0GU29 152 aa17.24■□□□□ 0.35
ACTN1-209ENST00000553659 A0A1W2PQJ5 194 aa17.24■□□□□ 0.35
ACTN1-209ENST00000553659 PDXKO00764 312 aa17.24■□□□□ 0.35
ACTN1-209ENST00000553659 CETN3O15182 167 aa17.24■□□□□ 0.35
ACTN1-209ENST00000553659 RPL13P26373 211 aaKnown RBP17.24■□□□□ 0.35
ACTN1-209ENST00000553659 TKTP29401 623 aaKnown RBP17.24■□□□□ 0.35
ACTN1-209ENST00000553659 CASP14P31944 242 aa17.24■□□□□ 0.35
ACTN1-209ENST00000553659 ADKP55263 362 aaKnown RBP17.24■□□□□ 0.35
ACTN1-209ENST00000553659 ALCAMQ13740 583 aa17.24■□□□□ 0.35
ACTN1-209ENST00000553659 KIAA2013Q8IYS2 634 aa17.24■□□□□ 0.35
ACTN1-209ENST00000553659 KIF18AQ8NI77 898 aa17.24■□□□□ 0.35
ACTN1-209ENST00000553659 SCFD1Q8WVM8 642 aa17.24■□□□□ 0.35
ACTN1-209ENST00000553659 HPS3Q969F9 1004 aa17.24■□□□□ 0.35
ACTN1-209ENST00000553659 DDX27Q96GQ7 796 aaKnown RBP17.24■□□□□ 0.35
ACTN1-209ENST00000553659 BORCS6Q96GS4 357 aa17.24■□□□□ 0.35
ACTN1-209ENST00000553659 KXD1Q9BQD3 176 aa17.24■□□□□ 0.35
ACTN1-209ENST00000553659 EDEM3Q9BZQ6 932 aa17.24■□□□□ 0.35
ACTN1-209ENST00000553659 ZHX3Q9H4I2 956 aa17.24■□□□□ 0.35
ACTN1-209ENST00000553659 PARVGQ9HBI0 331 aa17.24■□□□□ 0.35
ACTN1-209ENST00000553659 ABHD10Q9NUJ1 306 aa17.24■□□□□ 0.35
ACTN1-209ENST00000553659 CAPN11Q9UMQ6 739 aa17.24■□□□□ 0.35
ACTN1-209ENST00000553659 TNFSF13BQ9Y275 285 aa17.24■□□□□ 0.35
ACTN1-209ENST00000553659 LUC7L2Q9Y383 392 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms