RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 CD72P21854 359 aa19.66■□□□□ 0.74
SHMT2-206ENST00000553529 ABCD1P33897 745 aa19.66■□□□□ 0.74
SHMT2-206ENST00000553529 VIPR2P41587 438 aa19.66■□□□□ 0.74
SHMT2-206ENST00000553529 SNW1Q13573 536 aaKnown RBP19.66■□□□□ 0.74
SHMT2-206ENST00000553529 CNNM4Q6P4Q7 775 aa19.66■□□□□ 0.74
SHMT2-206ENST00000553529 PDCL2Q8N4E4 241 aa19.66■□□□□ 0.74
SHMT2-206ENST00000553529 KIAA0895Q8NCT3 520 aa19.66■□□□□ 0.74
SHMT2-206ENST00000553529 ZNF507Q8TCN5 953 aa19.66■□□□□ 0.74
SHMT2-206ENST00000553529 PLEKHO2Q8TD55 490 aa19.66■□□□□ 0.74
SHMT2-206ENST00000553529 SEPT5Q99719 369 aaPredicted RBP19.66■□□□□ 0.74
SHMT2-206ENST00000553529 ZCWPW1Q9H0M4 648 aa19.66■□□□□ 0.74
SHMT2-206ENST00000553529 TMEM206Q9H813 350 aa19.66■□□□□ 0.74
SHMT2-206ENST00000553529 TBC1D17Q9HA65 648 aa19.66■□□□□ 0.74
SHMT2-206ENST00000553529 FAM13BQ9NYF5 915 aa19.66■□□□□ 0.74
SHMT2-206ENST00000553529 MTF2Q9Y483 593 aaPredicted RBP19.66■□□□□ 0.74
SHMT2-206ENST00000553529 ARIH1Q9Y4X5 557 aaPredicted RBP19.66■□□□□ 0.74
SHMT2-206ENST00000553529 COL4A2P08572 1712 aa19.65■□□□□ 0.74
SHMT2-206ENST00000553529 A0A1W2PRU2 124 aa19.65■□□□□ 0.74
SHMT2-206ENST00000553529 OR6C75A6NL08 312 aa19.65■□□□□ 0.74
SHMT2-206ENST00000553529 DCNP07585 359 aaKnown RBP19.65■□□□□ 0.74
SHMT2-206ENST00000553529 HOXD11P31277 338 aaPredicted RBP19.65■□□□□ 0.74
SHMT2-206ENST00000553529 CASP4P49662 377 aa19.65■□□□□ 0.74
SHMT2-206ENST00000553529 NDUFA8P51970 172 aa19.65■□□□□ 0.74
SHMT2-206ENST00000553529 STK4Q13043 487 aa19.65■□□□□ 0.74
SHMT2-206ENST00000553529 ALCAMQ13740 583 aa19.65■□□□□ 0.74
SHMT2-206ENST00000553529 PDZD4Q76G19 769 aaPredicted RBP19.65■□□□□ 0.74
SHMT2-206ENST00000553529 GIPC2Q8TF65 315 aa19.65■□□□□ 0.74
SHMT2-206ENST00000553529 SPATA32Q96LK8 384 aa19.65■□□□□ 0.74
SHMT2-206ENST00000553529 ARHGEF3Q9NR81 526 aa19.65■□□□□ 0.74
SHMT2-206ENST00000553529 CFAP45Q9UL16 551 aa19.65■□□□□ 0.74
SHMT2-206ENST00000553529 HPSEQ9Y251 543 aa19.65■□□□□ 0.74
SHMT2-206ENST00000553529 NME7Q9Y5B8 376 aa19.65■□□□□ 0.74
SHMT2-206ENST00000553529 SHISA7A6NL88 538 aa19.64■□□□□ 0.73
SHMT2-206ENST00000553529 EIF3DO15371 548 aaKnown RBP eCLIP19.64■□□□□ 0.73
SHMT2-206ENST00000553529 GLULP15104 373 aa19.64■□□□□ 0.73
SHMT2-206ENST00000553529 KMT5BQ4FZB7 885 aa19.64■□□□□ 0.73
SHMT2-206ENST00000553529 ZNF512Q96ME7 567 aaPredicted RBP19.64■□□□□ 0.73
SHMT2-206ENST00000553529 TSPAN18Q96SJ8 248 aa19.64■□□□□ 0.73
SHMT2-206ENST00000553529 MKNK1Q9BUB5 465 aa19.64■□□□□ 0.73
SHMT2-206ENST00000553529 INTS13Q9NVM9 706 aa19.64■□□□□ 0.73
SHMT2-206ENST00000553529 ABI2Q9NYB9 513 aaPredicted RBP19.64■□□□□ 0.73
SHMT2-206ENST00000553529 WNT16Q9UBV4 365 aa19.64■□□□□ 0.73
SHMT2-206ENST00000553529 STK25O00506 426 aa19.63■□□□□ 0.73
SHMT2-206ENST00000553529 ATP2C2O75185 946 aa19.63■□□□□ 0.73
SHMT2-206ENST00000553529 AOC1P19801 751 aa19.63■□□□□ 0.73
SHMT2-206ENST00000553529 CYP4F8P98187 520 aa19.63■□□□□ 0.73
SHMT2-206ENST00000553529 AMPD3Q01432 767 aa19.63■□□□□ 0.73
SHMT2-206ENST00000553529 MYBPC2Q14324 1141 aa19.63■□□□□ 0.73
SHMT2-206ENST00000553529 MGAT5BQ3V5L5 792 aa19.63■□□□□ 0.73
SHMT2-206ENST00000553529 SV2CQ496J9 727 aa19.63■□□□□ 0.73
SHMT2-206ENST00000553529 GAREM2Q75VX8 874 aa19.63■□□□□ 0.73
SHMT2-206ENST00000553529 ZNF516Q92618 1163 aa19.63■□□□□ 0.73
SHMT2-206ENST00000553529 CCDC127Q96BQ5 260 aa19.63■□□□□ 0.73
SHMT2-206ENST00000553529 SMG9Q9H0W8 520 aaKnown RBP19.63■□□□□ 0.73
SHMT2-206ENST00000553529 SNX9Q9Y5X1 595 aa19.63■□□□□ 0.73
SHMT2-206ENST00000553529 GALR2O43603 387 aaPredicted RBP19.62■□□□□ 0.73
SHMT2-206ENST00000553529 LDHAP00338 332 aaKnown RBP19.62■□□□□ 0.73
SHMT2-206ENST00000553529 CST3P01034 146 aaPredicted RBP19.62■□□□□ 0.73
SHMT2-206ENST00000553529 TMEM191BP0C7N4 346 aa19.62■□□□□ 0.73
SHMT2-206ENST00000553529 SLFN14P0C7P3 912 aa19.62■□□□□ 0.73
SHMT2-206ENST00000553529 DLATP10515 647 aaKnown RBP19.62■□□□□ 0.73
SHMT2-206ENST00000553529 MRE11P49959 708 aa19.62■□□□□ 0.73
SHMT2-206ENST00000553529 EPHA5P54756 1037 aa19.62■□□□□ 0.73
SHMT2-206ENST00000553529 PLD1Q13393 1074 aa19.62■□□□□ 0.73
SHMT2-206ENST00000553529 SNRNP35Q16560 246 aaKnown RBP19.62■□□□□ 0.73
SHMT2-206ENST00000553529 VITQ6UXI7 678 aa19.62■□□□□ 0.73
SHMT2-206ENST00000553529 ASB16Q96NS5 453 aa19.62■□□□□ 0.73
SHMT2-206ENST00000553529 LRRC3BQ96PB8 259 aa19.62■□□□□ 0.73
SHMT2-206ENST00000553529 PI4K2AQ9BTU6 479 aa19.62■□□□□ 0.73
SHMT2-206ENST00000553529 LRRC27Q9C0I9 530 aa19.62■□□□□ 0.73
SHMT2-206ENST00000553529 AVENQ9NQS1 362 aaPredicted RBP19.62■□□□□ 0.73
SHMT2-206ENST00000553529 ASAH2Q9NR71 780 aa19.62■□□□□ 0.73
SHMT2-206ENST00000553529 SLC2A4RGQ9NR83 387 aa19.62■□□□□ 0.73
SHMT2-206ENST00000553529 TICRRQ7Z2Z1 1910 aa19.62■□□□□ 0.73
SHMT2-206ENST00000553529 ZNF233A6NK53 670 aa19.61■□□□□ 0.73
SHMT2-206ENST00000553529 CMA1P23946 247 aa19.61■□□□□ 0.73
SHMT2-206ENST00000553529 LMO2P25791 158 aa19.61■□□□□ 0.73
SHMT2-206ENST00000553529 PSMC1P62191 440 aaKnown RBP19.61■□□□□ 0.73
SHMT2-206ENST00000553529 KRT85P78386 507 aa19.61■□□□□ 0.73
SHMT2-206ENST00000553529 CYP24A1Q07973 514 aa19.61■□□□□ 0.73
SHMT2-206ENST00000553529 SOWAHAQ2M3V2 549 aa19.61■□□□□ 0.73
SHMT2-206ENST00000553529 ATL3Q6DD88 541 aa19.61■□□□□ 0.73
SHMT2-206ENST00000553529 IQCEQ6IPM2 695 aa19.61■□□□□ 0.73
SHMT2-206ENST00000553529 MTSS1LQ765P7 747 aa19.61■□□□□ 0.73
SHMT2-206ENST00000553529 RTL10Q7L3V2 364 aa19.61■□□□□ 0.73
SHMT2-206ENST00000553529 DNAJB7Q7Z6W7 309 aaPredicted RBP19.61■□□□□ 0.73
SHMT2-206ENST00000553529 CEP57L1Q8IYX8 460 aa19.61■□□□□ 0.73
SHMT2-206ENST00000553529 ZSCAN18Q8TBC5 510 aaPredicted RBP19.61■□□□□ 0.73
SHMT2-206ENST00000553529 KBTBD7Q8WVZ9 684 aa19.61■□□□□ 0.73
SHMT2-206ENST00000553529 ZNF560Q96MR9 790 aa19.61■□□□□ 0.73
SHMT2-206ENST00000553529 PKMYT1Q99640 499 aa19.61■□□□□ 0.73
SHMT2-206ENST00000553529 MAGEF1Q9HAY2 307 aa19.61■□□□□ 0.73
SHMT2-206ENST00000553529 HEBP1Q9NRV9 189 aa19.61■□□□□ 0.73
SHMT2-206ENST00000553529 DDX43Q9NXZ2 648 aaKnown RBP19.61■□□□□ 0.73
SHMT2-206ENST00000553529 ZFP37Q9Y6Q3 630 aaPredicted RBP19.61■□□□□ 0.73
SHMT2-206ENST00000553529 OBSL1O75147 1896 aa19.6■□□□□ 0.73
SHMT2-206ENST00000553529 CLCN5P51795 746 aa19.6■□□□□ 0.73
SHMT2-206ENST00000553529 PTPN5P54829 565 aa19.6■□□□□ 0.73
SHMT2-206ENST00000553529 POU5F1Q01860 360 aaKnown RBP19.6■□□□□ 0.73
SHMT2-206ENST00000553529 BMT2Q1RMZ1 405 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms