RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 PRRT2Q7Z6L0 340 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-220ENST00000553491 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-220ENST00000553491 ANKRD23Q86SG2 305 aa5.47□□□□□ -1.53
ATXN3-220ENST00000553491 ZNF589Q86UQ0 364 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-220ENST00000553491 C11orf74Q86VG3 221 aa5.47□□□□□ -1.53
ATXN3-220ENST00000553491 ZC3H18Q86VM9 953 aaKnown RBP5.47□□□□□ -1.53
ATXN3-220ENST00000553491 SPICE1Q8N0Z3 855 aa5.47□□□□□ -1.53
ATXN3-220ENST00000553491 ANKRD13CQ8N6S4 541 aa5.47□□□□□ -1.53
ATXN3-220ENST00000553491 CNTD1Q8N815 330 aa5.47□□□□□ -1.53
ATXN3-220ENST00000553491 KIAA1958Q8N8K9 716 aa5.47□□□□□ -1.53
ATXN3-220ENST00000553491 ERO1AQ96HE7 468 aa5.47□□□□□ -1.53
ATXN3-220ENST00000553491 CCDC17Q96LX7 622 aa5.47□□□□□ -1.53
ATXN3-220ENST00000553491 P2RX7Q99572 595 aaKnown RBP5.47□□□□□ -1.53
ATXN3-220ENST00000553491 ELF4Q99607 663 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-220ENST00000553491 ASPSCR1Q9BZE9 553 aa5.47□□□□□ -1.53
ATXN3-220ENST00000553491 DNAJC18Q9H819 358 aa5.47□□□□□ -1.53
ATXN3-220ENST00000553491 METTL14Q9HCE5 456 aaKnown RBP5.47□□□□□ -1.53
ATXN3-220ENST00000553491 CTNNA3Q9UI47 895 aa5.47□□□□□ -1.53
ATXN3-220ENST00000553491 TRIM17Q9Y577 477 aa5.47□□□□□ -1.53
ATXN3-220ENST00000553491 SPO11Q9Y5K1 396 aa5.47□□□□□ -1.53
ATXN3-220ENST00000553491 DUSP10Q9Y6W6 482 aa5.47□□□□□ -1.53
ATXN3-220ENST00000553491 NCANO14594 1321 aa5.47□□□□□ -1.53
ATXN3-220ENST00000553491 COL2A1P02458 1487 aaPredicted RBP5.46□□□□□ -1.53
ATXN3-220ENST00000553491 RFX7Q2KHR2 1363 aa5.46□□□□□ -1.54
ATXN3-220ENST00000553491 PRRG2O14669 202 aa5.46□□□□□ -1.54
ATXN3-220ENST00000553491 TLR2O60603 784 aa5.46□□□□□ -1.54
ATXN3-220ENST00000553491 HIP1RO75146 1068 aa5.46□□□□□ -1.54
ATXN3-220ENST00000553491 C4BPAP04003 597 aaKnown RBP5.46□□□□□ -1.54
ATXN3-220ENST00000553491 S100BP04271 92 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-220ENST00000553491 GSPT1P15170 499 aaKnown RBP5.46□□□□□ -1.54
ATXN3-220ENST00000553491 PTPN1P18031 435 aaKnown RBP5.46□□□□□ -1.54
ATXN3-220ENST00000553491 CHMLP26374 656 aa5.46□□□□□ -1.54
ATXN3-220ENST00000553491 PSMC4P43686 418 aa5.46□□□□□ -1.54
ATXN3-220ENST00000553491 KIF11P52732 1056 aa5.46□□□□□ -1.54
ATXN3-220ENST00000553491 USP14P54578 494 aa5.46□□□□□ -1.54
ATXN3-220ENST00000553491 NKX3-2P78367 333 aa5.46□□□□□ -1.54
ATXN3-220ENST00000553491 SMAD3P84022 425 aaKnown RBP5.46□□□□□ -1.54
ATXN3-220ENST00000553491 ICA1Q05084 483 aa5.46□□□□□ -1.54
ATXN3-220ENST00000553491 ITKQ08881 620 aa5.46□□□□□ -1.54
ATXN3-220ENST00000553491 ZNF174Q15697 407 aa5.46□□□□□ -1.54
ATXN3-220ENST00000553491 SMAD2Q15796 467 aaKnown RBP5.46□□□□□ -1.54
ATXN3-220ENST00000553491 IMMTQ16891 758 aaKnown RBP5.46□□□□□ -1.54
ATXN3-220ENST00000553491 BTBD8Q5XKL5 378 aa5.46□□□□□ -1.54
ATXN3-220ENST00000553491 CTU1Q7Z7A3 348 aaKnown RBP5.46□□□□□ -1.54
ATXN3-220ENST00000553491 TRIM48Q8IWZ4 208 aa5.46□□□□□ -1.54
ATXN3-220ENST00000553491 ADAMTS17Q8TE56 1095 aa5.46□□□□□ -1.54
ATXN3-220ENST00000553491 SLC5A5Q92911 643 aa5.46□□□□□ -1.54
ATXN3-220ENST00000553491 MTMR8Q96EF0 704 aa5.46□□□□□ -1.54
ATXN3-220ENST00000553491 CEP89Q96ST8 783 aa5.46□□□□□ -1.54
ATXN3-220ENST00000553491 PARK7Q99497 189 aaKnown RBP5.46□□□□□ -1.54
ATXN3-220ENST00000553491 RPAP3Q9H6T3 665 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-220ENST00000553491 SH2D4AQ9H788 454 aa5.46□□□□□ -1.54
ATXN3-220ENST00000553491 VTA1Q9NP79 307 aa5.46□□□□□ -1.54
ATXN3-220ENST00000553491 RBPJLQ9UBG7 517 aa5.46□□□□□ -1.54
ATXN3-220ENST00000553491 G3BP2Q9UN86 482 aaKnown RBP5.46□□□□□ -1.54
ATXN3-220ENST00000553491 STX8Q9UNK0 236 aa5.46□□□□□ -1.54
ATXN3-220ENST00000553491 AGTPBP1Q9UPW5 1226 aa5.46□□□□□ -1.54
ATXN3-220ENST00000553491 NUB1Q9Y5A7 615 aa5.46□□□□□ -1.54
ATXN3-220ENST00000553491 RLFQ13129 1914 aa5.45□□□□□ -1.54
ATXN3-220ENST00000553491 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-220ENST00000553491 A0A1W2PRG0 241 aa5.45□□□□□ -1.54
ATXN3-220ENST00000553491 B8ZZF3 427 aa5.45□□□□□ -1.54
ATXN3-220ENST00000553491 ACOT7O00154 380 aa5.45□□□□□ -1.54
ATXN3-220ENST00000553491 NMT2O60551 498 aa5.45□□□□□ -1.54
ATXN3-220ENST00000553491 ULK1O75385 1050 aa5.45□□□□□ -1.54
ATXN3-220ENST00000553491 FLOT1O75955 427 aa5.45□□□□□ -1.54
ATXN3-220ENST00000553491 PTX3P26022 381 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-220ENST00000553491 HOXD10P28358 340 aa5.45□□□□□ -1.54
ATXN3-220ENST00000553491 GUCY1A2P33402 732 aa5.45□□□□□ -1.54
ATXN3-220ENST00000553491 PTH1RQ03431 593 aa5.45□□□□□ -1.54
ATXN3-220ENST00000553491 GRIN1Q05586 938 aa5.45□□□□□ -1.54
ATXN3-220ENST00000553491 GABPAQ06546 454 aa5.45□□□□□ -1.54
ATXN3-220ENST00000553491 TRDNQ13061 729 aa5.45□□□□□ -1.54
ATXN3-220ENST00000553491 TMEM132BQ14DG7 1078 aa5.45□□□□□ -1.54
ATXN3-220ENST00000553491 TERF2Q15554 542 aa5.45□□□□□ -1.54
ATXN3-220ENST00000553491 ALX1Q15699 326 aa5.45□□□□□ -1.54
ATXN3-220ENST00000553491 ODR4Q5SWX8 454 aa5.45□□□□□ -1.54
ATXN3-220ENST00000553491 BROXQ5VW32 411 aa5.45□□□□□ -1.54
ATXN3-220ENST00000553491 IQSEC1Q6DN90 963 aa5.45□□□□□ -1.54
ATXN3-220ENST00000553491 CC2D1AQ6P1N0 951 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-220ENST00000553491 CLRN3Q8NCR9 226 aa5.45□□□□□ -1.54
ATXN3-220ENST00000553491 RAET1EQ8TD07 263 aa5.45□□□□□ -1.54
ATXN3-220ENST00000553491 COA7Q96BR5 231 aa5.45□□□□□ -1.54
ATXN3-220ENST00000553491 NUP88Q99567 741 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-220ENST00000553491 ARHGAP39Q9C0H5 1083 aa5.45□□□□□ -1.54
ATXN3-220ENST00000553491 MS4A5Q9H3V2 200 aa5.45□□□□□ -1.54
ATXN3-220ENST00000553491 PCIF1Q9H4Z3 704 aa5.45□□□□□ -1.54
ATXN3-220ENST00000553491 KCNH7Q9NS40 1196 aa5.45□□□□□ -1.54
ATXN3-220ENST00000553491 RIC8BQ9NVN3 520 aa5.45□□□□□ -1.54
ATXN3-220ENST00000553491 HOXC10Q9NYD6 342 aa5.45□□□□□ -1.54
ATXN3-220ENST00000553491 PCNTO95613 3336 aa5.45□□□□□ -1.54
ATXN3-220ENST00000553491 KAT6AQ92794 2004 aa5.45□□□□□ -1.54
ATXN3-220ENST00000553491 KIAA1217Q5T5P2 1943 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 GREB1LQ9C091 1923 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-220ENST00000553491 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-220ENST00000553491 F5H6K3 240 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 GABRDO14764 452 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 TNPO2O14787 897 aaKnown RBP5.44□□□□□ -1.54
ATXN3-220ENST00000553491 TTLL1O95922 423 aa5.44□□□□□ -1.54
ATXN3-220ENST00000553491 ZNF28P17035 718 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms