RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 GNL3LQ9NVN8 582 aaKnown RBP6.09□□□□□ -1.43
ATXN3-217ENST00000553287 IP6K2Q9UHH9 426 aa6.09□□□□□ -1.43
ATXN3-217ENST00000553287 CFAP74Q9C0B2 1584 aa6.09□□□□□ -1.43
ATXN3-217ENST00000553287 PTPRTO14522 1441 aa6.08□□□□□ -1.44
ATXN3-217ENST00000553287 PRAMEF33A0A0G2JMD5 474 aa6.08□□□□□ -1.44
ATXN3-217ENST00000553287 A0A1W2PS29 197 aa6.08□□□□□ -1.44
ATXN3-217ENST00000553287 PLEKHD1A6NEE1 506 aa6.08□□□□□ -1.44
ATXN3-217ENST00000553287 ZAR1LA6NP61 321 aa6.08□□□□□ -1.44
ATXN3-217ENST00000553287 PRAMEF10O60809 474 aa6.08□□□□□ -1.44
ATXN3-217ENST00000553287 DTNBO60941 627 aa6.08□□□□□ -1.44
ATXN3-217ENST00000553287 PPFIA2O75334 1257 aa6.08□□□□□ -1.44
ATXN3-217ENST00000553287 ARIH2O95376 493 aa6.08□□□□□ -1.44
ATXN3-217ENST00000553287 ANXA1P04083 346 aa6.08□□□□□ -1.44
ATXN3-217ENST00000553287 GJB1P08034 283 aa6.08□□□□□ -1.44
ATXN3-217ENST00000553287 KCNA2P16389 499 aa6.08□□□□□ -1.44
ATXN3-217ENST00000553287 GATA3P23771 443 aa6.08□□□□□ -1.44
ATXN3-217ENST00000553287 RPS7P62081 194 aaKnown RBP6.08□□□□□ -1.44
ATXN3-217ENST00000553287 DYRK1AQ13627 763 aa6.08□□□□□ -1.44
ATXN3-217ENST00000553287 CD300EQ496F6 205 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-217ENST00000553287 LNX2Q8N448 690 aa6.08□□□□□ -1.44
ATXN3-217ENST00000553287 AFAP1Q8N556 730 aa6.08□□□□□ -1.44
ATXN3-217ENST00000553287 SLC9A6Q92581 669 aa6.08□□□□□ -1.44
ATXN3-217ENST00000553287 TMEM125Q96AQ2 219 aa6.08□□□□□ -1.44
ATXN3-217ENST00000553287 HOOK2Q96ED9 719 aa6.08□□□□□ -1.44
ATXN3-217ENST00000553287 LRIG1Q96JA1 1093 aa6.08□□□□□ -1.44
ATXN3-217ENST00000553287 CRAMP1Q96RY5 1269 aa6.08□□□□□ -1.44
ATXN3-217ENST00000553287 SLAMF7Q9NQ25 335 aa6.08□□□□□ -1.44
ATXN3-217ENST00000553287 CTTNBP2NLQ9P2B4 639 aa6.08□□□□□ -1.44
ATXN3-217ENST00000553287 ANKRD6Q9Y2G4 727 aa6.08□□□□□ -1.44
ATXN3-217ENST00000553287 NEU2Q9Y3R4 380 aa6.08□□□□□ -1.44
ATXN3-217ENST00000553287 SAMD9Q5K651 1589 aa6.08□□□□□ -1.44
ATXN3-217ENST00000553287 ATP10AO60312 1499 aa6.08□□□□□ -1.44
ATXN3-217ENST00000553287 C9orf84Q5VXU9 1444 aa6.08□□□□□ -1.44
ATXN3-217ENST00000553287 CAMSAP1Q5T5Y3 1602 aa6.07□□□□□ -1.44
ATXN3-217ENST00000553287 SLC16A6O15403 523 aa6.07□□□□□ -1.44
ATXN3-217ENST00000553287 ALDH1L1O75891 902 aa6.07□□□□□ -1.44
ATXN3-217ENST00000553287 GNAI3P08754 354 aa6.07□□□□□ -1.44
ATXN3-217ENST00000553287 VCAM1P19320 739 aa6.07□□□□□ -1.44
ATXN3-217ENST00000553287 AKAP5P24588 427 aa6.07□□□□□ -1.44
ATXN3-217ENST00000553287 PRDX5P30044 214 aa6.07□□□□□ -1.44
ATXN3-217ENST00000553287 HK3P52790 923 aa6.07□□□□□ -1.44
ATXN3-217ENST00000553287 PSMC1P62191 440 aaKnown RBP6.07□□□□□ -1.44
ATXN3-217ENST00000553287 GNAI1P63096 354 aa6.07□□□□□ -1.44
ATXN3-217ENST00000553287 PIGFQ07326 219 aa6.07□□□□□ -1.44
ATXN3-217ENST00000553287 SF3B3Q15393 1217 aaKnown RBP6.07□□□□□ -1.44
ATXN3-217ENST00000553287 STRIP1Q5VSL9 837 aa6.07□□□□□ -1.44
ATXN3-217ENST00000553287 CATIPQ7Z7H3 387 aa6.07□□□□□ -1.44
ATXN3-217ENST00000553287 PDSS2Q86YH6 399 aa6.07□□□□□ -1.44
ATXN3-217ENST00000553287 C1orf43Q9BWL3 253 aa6.07□□□□□ -1.44
ATXN3-217ENST00000553287 TCF7L1Q9HCS4 588 aa6.07□□□□□ -1.44
ATXN3-217ENST00000553287 KCTD5Q9NXV2 234 aa6.07□□□□□ -1.44
ATXN3-217ENST00000553287 DDX56Q9NY93 547 aaKnown RBP6.07□□□□□ -1.44
ATXN3-217ENST00000553287 CCDC195A0A1B0GUA6 201 aa6.06□□□□□ -1.44
ATXN3-217ENST00000553287 PRSS29PA6NIE9 313 aa6.06□□□□□ -1.44
ATXN3-217ENST00000553287 SUN1O94901 812 aa6.06□□□□□ -1.44
ATXN3-217ENST00000553287 FTLP02792 175 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-217ENST00000553287 FTH1P19P0C7X4 201 aa6.06□□□□□ -1.44
ATXN3-217ENST00000553287 PHKA1P46020 1223 aa6.06□□□□□ -1.44
ATXN3-217ENST00000553287 ANXA11P50995 505 aaKnown RBP6.06□□□□□ -1.44
ATXN3-217ENST00000553287 FXR1P51114 621 aaKnown RBP eCLIP6.06□□□□□ -1.44
ATXN3-217ENST00000553287 MRPS35P82673 323 aaKnown RBP6.06□□□□□ -1.44
ATXN3-217ENST00000553287 NOGQ13253 232 aa6.06□□□□□ -1.44
ATXN3-217ENST00000553287 ZNF169Q14929 603 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-217ENST00000553287 PGS1Q32NB8 556 aa6.06□□□□□ -1.44
ATXN3-217ENST00000553287 PRR16Q569H4 304 aa6.06□□□□□ -1.44
ATXN3-217ENST00000553287 HEATR3Q7Z4Q2 680 aa6.06□□□□□ -1.44
ATXN3-217ENST00000553287 SH2D3CQ8N5H7 860 aa6.06□□□□□ -1.44
ATXN3-217ENST00000553287 SIMC1Q8NDZ2 872 aa6.06□□□□□ -1.44
ATXN3-217ENST00000553287 SSH3Q8TE77 659 aa6.06□□□□□ -1.44
ATXN3-217ENST00000553287 STAG1Q8WVM7 1258 aa6.06□□□□□ -1.44
ATXN3-217ENST00000553287 SCAMP4Q969E2 229 aa6.06□□□□□ -1.44
ATXN3-217ENST00000553287 RGMAQ96B86 450 aa6.06□□□□□ -1.44
ATXN3-217ENST00000553287 TRIB1Q96RU8 372 aa6.06□□□□□ -1.44
ATXN3-217ENST00000553287 GTPBP4Q9BZE4 634 aaKnown RBP6.06□□□□□ -1.44
ATXN3-217ENST00000553287 TYW1Q9NV66 732 aaKnown RBP6.06□□□□□ -1.44
ATXN3-217ENST00000553287 INTS13Q9NVM9 706 aa6.06□□□□□ -1.44
ATXN3-217ENST00000553287 CFAP97Q9P2B7 532 aa6.06□□□□□ -1.44
ATXN3-217ENST00000553287 LRIT1Q9P2V4 623 aa6.06□□□□□ -1.44
ATXN3-217ENST00000553287 ABCF2Q9UG63 623 aa6.06□□□□□ -1.44
ATXN3-217ENST00000553287 PRXQ9BXM0 1461 aa6.06□□□□□ -1.44
ATXN3-217ENST00000553287 NCOA1Q15788 1441 aa6.06□□□□□ -1.44
ATXN3-217ENST00000553287 MAGI2Q86UL8 1455 aa6.05□□□□□ -1.44
ATXN3-217ENST00000553287 LOC105371045A0A1W2PR82 267 aa6.05□□□□□ -1.44
ATXN3-217ENST00000553287 E9PLN8 166 aa6.05□□□□□ -1.44
ATXN3-217ENST00000553287 TOR1BO14657 336 aa6.05□□□□□ -1.44
ATXN3-217ENST00000553287 PEX1O43933 1283 aa6.05□□□□□ -1.44
ATXN3-217ENST00000553287 PDGFRBP09619 1106 aa6.05□□□□□ -1.44
ATXN3-217ENST00000553287 PF4V1P10720 104 aa6.05□□□□□ -1.44
ATXN3-217ENST00000553287 TYRP1P17643 537 aa6.05□□□□□ -1.44
ATXN3-217ENST00000553287 CLK3P49761 638 aaKnown RBP6.05□□□□□ -1.44
ATXN3-217ENST00000553287 RARRES1P49788 294 aa6.05□□□□□ -1.44
ATXN3-217ENST00000553287 MAP2K6P52564 334 aa6.05□□□□□ -1.44
ATXN3-217ENST00000553287 POU6F2P78424 691 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-217ENST00000553287 CCDC157Q569K6 752 aa6.05□□□□□ -1.44
ATXN3-217ENST00000553287 TAPT1Q6NXT6 567 aa6.05□□□□□ -1.44
ATXN3-217ENST00000553287 SLC30A10Q6XR72 485 aa6.05□□□□□ -1.44
ATXN3-217ENST00000553287 FAM90A1Q86YD7 464 aa6.05□□□□□ -1.44
ATXN3-217ENST00000553287 FAM9AQ8IZU1 332 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-217ENST00000553287 SLC30A5Q8TAD4 765 aa6.05□□□□□ -1.44
ATXN3-217ENST00000553287 CAGE1Q8TC20 777 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms