RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 HAUS5O94927 633 aa5.99□□□□□ -1.45
SCFD1-209ENST00000553280 UNC5CO95185 931 aa5.99□□□□□ -1.45
SCFD1-209ENST00000553280 POMCP01189 267 aa5.99□□□□□ -1.45
SCFD1-209ENST00000553280 DHRS4L1P0CG22 281 aa5.99□□□□□ -1.45
SCFD1-209ENST00000553280 TXNP10599 105 aaKnown RBP5.99□□□□□ -1.45
SCFD1-209ENST00000553280 MYL4P12829 197 aa5.99□□□□□ -1.45
SCFD1-209ENST00000553280 ALAS1P13196 640 aa5.99□□□□□ -1.45
SCFD1-209ENST00000553280 KLRC1P26715 233 aa5.99□□□□□ -1.45
SCFD1-209ENST00000553280 CARSP49589 748 aaKnown RBP5.99□□□□□ -1.45
SCFD1-209ENST00000553280 PSMC1P62191 440 aaKnown RBP5.99□□□□□ -1.45
SCFD1-209ENST00000553280 DUSP8Q13202 625 aa5.99□□□□□ -1.45
SCFD1-209ENST00000553280 UBXN2BQ14CS0 331 aa5.99□□□□□ -1.45
SCFD1-209ENST00000553280 BMT2Q1RMZ1 405 aa5.99□□□□□ -1.45
SCFD1-209ENST00000553280 AMOTQ4VCS5 1084 aa5.99□□□□□ -1.45
SCFD1-209ENST00000553280 UBE3BQ7Z3V4 1068 aa5.99□□□□□ -1.45
SCFD1-209ENST00000553280 USP37Q86T82 979 aa5.99□□□□□ -1.45
SCFD1-209ENST00000553280 SLC15A4Q8N697 577 aa5.99□□□□□ -1.45
SCFD1-209ENST00000553280 SCAMP4Q969E2 229 aa5.99□□□□□ -1.45
SCFD1-209ENST00000553280 TBATAQ96M53 351 aa5.99□□□□□ -1.45
SCFD1-209ENST00000553280 PAGR1Q9BTK6 254 aa5.99□□□□□ -1.45
SCFD1-209ENST00000553280 MAGEH1Q9H213 219 aa5.99□□□□□ -1.45
SCFD1-209ENST00000553280 GSTO2Q9H4Y5 243 aa5.99□□□□□ -1.45
SCFD1-209ENST00000553280 ITGB1BP2Q9UKP3 347 aa5.99□□□□□ -1.45
SCFD1-209ENST00000553280 SLC45A2Q9UMX9 530 aa5.99□□□□□ -1.45
SCFD1-209ENST00000553280 M0R3H8 397 aa5.98□□□□□ -1.45
SCFD1-209ENST00000553280 GRPP07492 148 aa5.98□□□□□ -1.45
SCFD1-209ENST00000553280 ADRB1P08588 477 aa5.98□□□□□ -1.45
SCFD1-209ENST00000553280 SERPINF1P36955 418 aa5.98□□□□□ -1.45
SCFD1-209ENST00000553280 UCP3P55916 312 aa5.98□□□□□ -1.45
SCFD1-209ENST00000553280 EFEMP1Q12805 493 aa5.98□□□□□ -1.45
SCFD1-209ENST00000553280 PTK2BQ14289 1009 aa5.98□□□□□ -1.45
SCFD1-209ENST00000553280 SPARCL1Q14515 664 aa5.98□□□□□ -1.45
SCFD1-209ENST00000553280 ZNF568Q3ZCX4 644 aa5.98□□□□□ -1.45
SCFD1-209ENST00000553280 SPATS1Q496A3 300 aa5.98□□□□□ -1.45
SCFD1-209ENST00000553280 UTP14CQ5TAP6 766 aaKnown RBP5.98□□□□□ -1.45
SCFD1-209ENST00000553280 ANKS6Q68DC2 871 aa5.98□□□□□ -1.45
SCFD1-209ENST00000553280 ATG16L2Q8NAA4 619 aa5.98□□□□□ -1.45
SCFD1-209ENST00000553280 TCF25Q9BQ70 676 aa5.98□□□□□ -1.45
SCFD1-209ENST00000553280 STK31Q9BXU1 1019 aa5.98□□□□□ -1.45
SCFD1-209ENST00000553280 SIK2Q9H0K1 926 aa5.98□□□□□ -1.45
SCFD1-209ENST00000553280 NECTIN3Q9NQS3 549 aa5.98□□□□□ -1.45
SCFD1-209ENST00000553280 FBXO34Q9NWN3 711 aa5.98□□□□□ -1.45
SCFD1-209ENST00000553280 DACT1Q9NYF0 836 aa5.98□□□□□ -1.45
SCFD1-209ENST00000553280 GRHPRQ9UBQ7 328 aa5.98□□□□□ -1.45
SCFD1-209ENST00000553280 ZNF212Q9UDV6 495 aa5.98□□□□□ -1.45
SCFD1-209ENST00000553280 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.98□□□□□ -1.45
SCFD1-209ENST00000553280 TMX2Q9Y320 296 aa5.98□□□□□ -1.45
SCFD1-209ENST00000553280 SLC4A7Q9Y6M7 1214 aa5.98□□□□□ -1.45
SCFD1-209ENST00000553280 ZNF785A8K8V0 405 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 LGALS16A8MUM7 142 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 TMEM233B4DJY2 109 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 MYO1CO00159 1063 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 MATN2O00339 956 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 SYT5O00445 386 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 CHEK2O96017 543 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 A1BGP04217 495 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 VEGFAP15692 232 aaPredicted RBP5.97□□□□□ -1.45
SCFD1-209ENST00000553280 BTF3P20290 206 aaKnown RBP5.97□□□□□ -1.45
SCFD1-209ENST00000553280 IL1R2P27930 398 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 ITGA8P53708 1063 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 ARL4CP56559 192 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 KIAA2012Q0VF49 1180 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 FSTL1Q12841 308 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 TCF15Q12870 199 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 RIN1Q13671 783 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 CRB2Q5IJ48 1285 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 DCAF12L1Q5VU92 463 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 RRAGBQ5VZM2 374 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 CYP26C1Q6V0L0 522 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 KRT28Q7Z3Y7 464 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 FAM124AQ86V42 546 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 KBTBD2Q8IY47 623 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 YAF2Q8IY57 180 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 LGI4Q8N135 537 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 MPP5Q8N3R9 675 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 ZNF384Q8TF68 577 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 MAGEB5Q9BZ81 275 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 TINAGL1Q9GZM7 467 aaPredicted RBP5.97□□□□□ -1.45
SCFD1-209ENST00000553280 AGO3Q9H9G7 860 aaKnown RBP5.97□□□□□ -1.45
SCFD1-209ENST00000553280 MSL2Q9HCI7 577 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 TMEM8AQ9HCN3 771 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 TBC1D23Q9NUY8 699 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 AGAP1Q9UPQ3 857 aa5.97□□□□□ -1.45
SCFD1-209ENST00000553280 FAM234BA2RU67 622 aa5.96□□□□□ -1.46
SCFD1-209ENST00000553280 ACKR2O00590 384 aa5.96□□□□□ -1.46
SCFD1-209ENST00000553280 KCNQ3O43525 872 aa5.96□□□□□ -1.46
SCFD1-209ENST00000553280 STC2O76061 302 aa5.96□□□□□ -1.46
SCFD1-209ENST00000553280 AGFG2O95081 481 aa5.96□□□□□ -1.46
SCFD1-209ENST00000553280 NDST3O95803 873 aa5.96□□□□□ -1.46
SCFD1-209ENST00000553280 PIM1P11309 404 aaPredicted RBP5.96□□□□□ -1.46
SCFD1-209ENST00000553280 GABRB3P28472 473 aa5.96□□□□□ -1.46
SCFD1-209ENST00000553280 MAPK9P45984 424 aa5.96□□□□□ -1.46
SCFD1-209ENST00000553280 ZNF135P52742 658 aaPredicted RBP5.96□□□□□ -1.46
SCFD1-209ENST00000553280 COPAP53621 1224 aa5.96□□□□□ -1.46
SCFD1-209ENST00000553280 RAP2BP61225 183 aa5.96□□□□□ -1.46
SCFD1-209ENST00000553280 PRKG1Q13976 671 aa5.96□□□□□ -1.46
SCFD1-209ENST00000553280 MAPRE1Q15691 268 aaKnown RBP5.96□□□□□ -1.46
SCFD1-209ENST00000553280 RAB30Q15771 203 aa5.96□□□□□ -1.46
SCFD1-209ENST00000553280 TBC1D10BQ4KMP7 808 aaPredicted RBP5.96□□□□□ -1.46
SCFD1-209ENST00000553280 BORAQ6PGQ7 559 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms