RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 TRMT10BQ6PF06 316 aaKnown RBP6.64□□□□□ -1.35
SCFD1-208ENST00000553278 SEM1Q6ZVN7 128 aa6.64□□□□□ -1.35
SCFD1-208ENST00000553278 USP49Q70CQ1 688 aa6.64□□□□□ -1.35
SCFD1-208ENST00000553278 DTX1Q86Y01 620 aa6.64□□□□□ -1.35
SCFD1-208ENST00000553278 IRF2BP1Q8IU81 584 aa6.64□□□□□ -1.35
SCFD1-208ENST00000553278 CPOQ8IVL8 374 aa6.64□□□□□ -1.35
SCFD1-208ENST00000553278 HERC6Q8IVU3 1022 aa6.64□□□□□ -1.35
SCFD1-208ENST00000553278 SMCR8Q8TEV9 937 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-208ENST00000553278 THAP4Q8WY91 577 aa6.64□□□□□ -1.35
SCFD1-208ENST00000553278 SLC7A6OSQ96CW6 309 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-208ENST00000553278 KIRREL1Q96J84 757 aa6.64□□□□□ -1.35
SCFD1-208ENST00000553278 SYT3Q9BQG1 590 aa6.64□□□□□ -1.35
SCFD1-208ENST00000553278 GORASP1Q9BQQ3 440 aa6.64□□□□□ -1.35
SCFD1-208ENST00000553278 MS4A7Q9GZW8 240 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-208ENST00000553278 SIK2Q9H0K1 926 aa6.64□□□□□ -1.35
SCFD1-208ENST00000553278 MLXIPQ9HAP2 919 aa6.64□□□□□ -1.35
SCFD1-208ENST00000553278 JKAMPQ9P055 326 aa6.64□□□□□ -1.35
SCFD1-208ENST00000553278 FAM184BQ9ULE4 1060 aa6.64□□□□□ -1.35
SCFD1-208ENST00000553278 MTO1Q9Y2Z2 717 aaKnown RBP6.64□□□□□ -1.35
SCFD1-208ENST00000553278 RBM8AQ9Y5S9 174 aaKnown RBP6.64□□□□□ -1.35
SCFD1-208ENST00000553278 ATRNL1Q5VV63 1379 aa6.64□□□□□ -1.35
SCFD1-208ENST00000553278 C2orf78A6NCI8 922 aa6.63□□□□□ -1.35
SCFD1-208ENST00000553278 DNAJB5O75953 348 aa6.63□□□□□ -1.35
SCFD1-208ENST00000553278 ACTL6BO94805 426 aa6.63□□□□□ -1.35
SCFD1-208ENST00000553278 GLP2RO95838 553 aa6.63□□□□□ -1.35
SCFD1-208ENST00000553278 TBX18O95935 607 aa6.63□□□□□ -1.35
SCFD1-208ENST00000553278 ANXA1P04083 346 aa6.63□□□□□ -1.35
SCFD1-208ENST00000553278 JUNP05412 331 aaKnown RBP6.63□□□□□ -1.35
SCFD1-208ENST00000553278 ATP1A3P13637 1013 aa6.63□□□□□ -1.35
SCFD1-208ENST00000553278 ATP5JP18859 108 aa6.63□□□□□ -1.35
SCFD1-208ENST00000553278 VIPR1P32241 457 aa6.63□□□□□ -1.35
SCFD1-208ENST00000553278 TUBP50607 506 aa6.63□□□□□ -1.35
SCFD1-208ENST00000553278 CLNS1AP54105 237 aaKnown RBP6.63□□□□□ -1.35
SCFD1-208ENST00000553278 RTP5Q14D33 572 aa6.63□□□□□ -1.35
SCFD1-208ENST00000553278 NBPF8Q3BBV2 869 aa6.63□□□□□ -1.35
SCFD1-208ENST00000553278 LCE3BQ5TA77 95 aa6.63□□□□□ -1.35
SCFD1-208ENST00000553278 KRT40Q6A162 431 aa6.63□□□□□ -1.35
SCFD1-208ENST00000553278 CRTC1Q6UUV9 634 aa6.63□□□□□ -1.35
SCFD1-208ENST00000553278 C16orf54Q6UWD8 224 aa6.63□□□□□ -1.35
SCFD1-208ENST00000553278 ZNF365Q70YC5 407 aa6.63□□□□□ -1.35
SCFD1-208ENST00000553278 SIAH1Q8IUQ4 282 aa6.63□□□□□ -1.35
SCFD1-208ENST00000553278 TP53INP2Q8IXH6 220 aa6.63□□□□□ -1.35
SCFD1-208ENST00000553278 KYQ8NBH2 561 aa6.63□□□□□ -1.35
SCFD1-208ENST00000553278 AFG1LQ8WV93 481 aa6.63□□□□□ -1.35
SCFD1-208ENST00000553278 CFHR4Q92496 578 aa6.63□□□□□ -1.35
SCFD1-208ENST00000553278 HTRA1Q92743 480 aa6.63□□□□□ -1.35
SCFD1-208ENST00000553278 RILPL2Q969X0 211 aa6.63□□□□□ -1.35
SCFD1-208ENST00000553278 C11orf84Q9BUA3 381 aaPredicted RBP6.63□□□□□ -1.35
SCFD1-208ENST00000553278 KATNBL1Q9H079 304 aa6.63□□□□□ -1.35
SCFD1-208ENST00000553278 PCDHAC1Q9H158 963 aa6.63□□□□□ -1.35
SCFD1-208ENST00000553278 SEMA6BQ9H3T3 888 aa6.63□□□□□ -1.35
SCFD1-208ENST00000553278 GPR35Q9HC97 309 aa6.63□□□□□ -1.35
SCFD1-208ENST00000553278 OLA1Q9NTK5 396 aaKnown RBP6.63□□□□□ -1.35
SCFD1-208ENST00000553278 ZSCAN32Q9NX65 697 aa6.63□□□□□ -1.35
SCFD1-208ENST00000553278 ZMYND8Q9ULU4 1186 aaPredicted RBP6.63□□□□□ -1.35
SCFD1-208ENST00000553278 CTDP1Q9Y5B0 961 aaPredicted RBP6.63□□□□□ -1.35
SCFD1-208ENST00000553278 IRS2Q9Y4H2 1338 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 A0A087WZ62 844 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 LOC102723971A0A1B0GUV8 181 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 TCRBV7S2A1N4TA0A589 114 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 ZNF785A8K8V0 405 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 RAB27BO00194 218 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 TOX4O94842 621 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 PROCP04070 461 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 XRCC6P12956 609 aaKnown RBP eCLIP6.62□□□□□ -1.35
SCFD1-208ENST00000553278 AARSP49588 968 aaKnown RBP eCLIP6.62□□□□□ -1.35
SCFD1-208ENST00000553278 AP2B1P63010 937 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 APBA1Q02410 837 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 UBE3AQ05086 875 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 PCOLCEQ15113 449 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 DLGAP5Q15398 846 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 TRIM71Q2Q1W2 868 aaKnown RBP6.62□□□□□ -1.35
SCFD1-208ENST00000553278 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.62□□□□□ -1.35
SCFD1-208ENST00000553278 AGAP9Q5VTM2 703 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 CCDC30Q5VVM6 783 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 ICE2Q659A1 982 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 KIAA0408Q6ZU52 694 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 BRINP3Q76B58 766 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 FASTKD5Q7L8L6 764 aaKnown RBP6.62□□□□□ -1.35
SCFD1-208ENST00000553278 USP37Q86T82 979 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 ZDHHC14Q8IZN3 488 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 TSPYL6Q8N831 410 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 OR5M3Q8NGP4 307 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 NUP133Q8WUM0 1156 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 CENPIQ92674 756 aaPredicted RBP6.62□□□□□ -1.35
SCFD1-208ENST00000553278 KCNC2Q96PR1 638 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 PPP1R9BQ96SB3 815 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 RBM15Q96T37 977 aaKnown RBP eCLIP6.62□□□□□ -1.35
SCFD1-208ENST00000553278 RTKNQ9BST9 563 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 DDX23Q9BUQ8 820 aaKnown RBP6.62□□□□□ -1.35
SCFD1-208ENST00000553278 MRI1Q9BV20 369 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 PABPC3Q9H361 631 aaKnown RBP6.62□□□□□ -1.35
SCFD1-208ENST00000553278 XPR1Q9UBH6 696 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 CA14Q9ULX7 337 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 TTLL3Q9Y4R7 772 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 HS3ST4Q9Y661 456 aa6.62□□□□□ -1.35
SCFD1-208ENST00000553278 F5H0A9 414 aaPredicted RBP6.61□□□□□ -1.35
SCFD1-208ENST00000553278 WNT10BO00744 389 aa6.61□□□□□ -1.35
SCFD1-208ENST00000553278 VSIG10L2P0DP72 767 aa6.61□□□□□ -1.35
SCFD1-208ENST00000553278 ALAS1P13196 640 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms