RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 ST13P5Q8NFI4 369 aaPredicted RBP20.21■□□□□ 0.83
HDAC4-217ENST00000553145 TMEM174Q8WUU8 243 aa20.21■□□□□ 0.83
HDAC4-217ENST00000553145 RSAD2Q8WXG1 361 aa20.21■□□□□ 0.83
HDAC4-217ENST00000553145 KCNK12Q9HB15 430 aa20.21■□□□□ 0.83
HDAC4-217ENST00000553145 GDAP2Q9NXN4 497 aa20.21■□□□□ 0.83
HDAC4-217ENST00000553145 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.21■□□□□ 0.83
HDAC4-217ENST00000553145 TRAF3IP3Q9Y228 551 aa20.21■□□□□ 0.83
HDAC4-217ENST00000553145 SNX9Q9Y5X1 595 aa20.21■□□□□ 0.83
HDAC4-217ENST00000553145 MYO10Q9HD67 2058 aa20.2■□□□□ 0.82
HDAC4-217ENST00000553145 NRG2O14511 850 aaPredicted RBP20.2■□□□□ 0.82
HDAC4-217ENST00000553145 CST3P01034 146 aaPredicted RBP20.2■□□□□ 0.82
HDAC4-217ENST00000553145 SIGLEC14Q08ET2 396 aa20.2■□□□□ 0.82
HDAC4-217ENST00000553145 SLC39A12Q504Y0 691 aa20.2■□□□□ 0.82
HDAC4-217ENST00000553145 LRRTM3Q86VH5 581 aa20.2■□□□□ 0.82
HDAC4-217ENST00000553145 OSTM1Q86WC4 334 aa20.2■□□□□ 0.82
HDAC4-217ENST00000553145 THEM5Q8N1Q8 247 aa20.2■□□□□ 0.82
HDAC4-217ENST00000553145 GUF1Q8N442 669 aaKnown RBP20.2■□□□□ 0.82
HDAC4-217ENST00000553145 ING5Q8WYH8 240 aa20.2■□□□□ 0.82
HDAC4-217ENST00000553145 ASIC4Q96FT7 647 aa20.2■□□□□ 0.82
HDAC4-217ENST00000553145 CCDC34Q96HJ3 373 aa20.2■□□□□ 0.82
HDAC4-217ENST00000553145 HPDLQ96IR7 371 aa20.2■□□□□ 0.82
HDAC4-217ENST00000553145 CORO1BQ9BR76 489 aa20.2■□□□□ 0.82
HDAC4-217ENST00000553145 CDH7Q9ULB5 785 aa20.2■□□□□ 0.82
HDAC4-217ENST00000553145 SLC27A5Q9Y2P5 690 aa20.2■□□□□ 0.82
HDAC4-217ENST00000553145 TMEM221A6NGB7 291 aa20.19■□□□□ 0.82
HDAC4-217ENST00000553145 LRRIQ3A6PVS8 624 aaPredicted RBP20.19■□□□□ 0.82
HDAC4-217ENST00000553145 M0R296 226 aa20.19■□□□□ 0.82
HDAC4-217ENST00000553145 HCRTO43612 131 aa20.19■□□□□ 0.82
HDAC4-217ENST00000553145 HUS1O60921 280 aa20.19■□□□□ 0.82
HDAC4-217ENST00000553145 PRPF40AO75400 957 aaKnown RBP20.19■□□□□ 0.82
HDAC4-217ENST00000553145 SOAT2O75908 522 aa20.19■□□□□ 0.82
HDAC4-217ENST00000553145 PTPN2P17706 415 aa20.19■□□□□ 0.82
HDAC4-217ENST00000553145 SOWAHAQ2M3V2 549 aa20.19■□□□□ 0.82
HDAC4-217ENST00000553145 POTEHQ6S545 545 aa20.19■□□□□ 0.82
HDAC4-217ENST00000553145 HFE2Q6ZVN8 426 aa20.19■□□□□ 0.82
HDAC4-217ENST00000553145 HS6ST3Q8IZP7 471 aa20.19■□□□□ 0.82
HDAC4-217ENST00000553145 PARD3BQ8TEW8 1205 aa20.19■□□□□ 0.82
HDAC4-217ENST00000553145 FGF13Q92913 245 aa20.19■□□□□ 0.82
HDAC4-217ENST00000553145 TIGD1Q96MW7 591 aa20.19■□□□□ 0.82
HDAC4-217ENST00000553145 DNAJC25Q9H1X3 360 aa20.19■□□□□ 0.82
HDAC4-217ENST00000553145 CHMP5Q9NZZ3 219 aa20.19■□□□□ 0.82
HDAC4-217ENST00000553145 RAPGEFL1Q9UHV5 662 aa20.19■□□□□ 0.82
HDAC4-217ENST00000553145 CALUO43852 315 aaPredicted RBP20.18■□□□□ 0.82
HDAC4-217ENST00000553145 KIF20AO95235 890 aa20.18■□□□□ 0.82
HDAC4-217ENST00000553145 ACAT1P24752 427 aaKnown RBP20.18■□□□□ 0.82
HDAC4-217ENST00000553145 CCR2P41597 374 aa20.18■□□□□ 0.82
HDAC4-217ENST00000553145 DLG4P78352 724 aa20.18■□□□□ 0.82
HDAC4-217ENST00000553145 ZCWPW2Q504Y3 356 aa20.18■□□□□ 0.82
HDAC4-217ENST00000553145 PRSS36Q5K4E3 855 aa20.18■□□□□ 0.82
HDAC4-217ENST00000553145 LIMS2Q7Z4I7 341 aa20.18■□□□□ 0.82
HDAC4-217ENST00000553145 NPAS3Q8IXF0 933 aa20.18■□□□□ 0.82
HDAC4-217ENST00000553145 ADGRF2Q8IZF7 708 aa20.18■□□□□ 0.82
HDAC4-217ENST00000553145 TOP6BLQ8N6T0 577 aa20.18■□□□□ 0.82
HDAC4-217ENST00000553145 SPATA20Q8TB22 786 aa20.18■□□□□ 0.82
HDAC4-217ENST00000553145 TCEAL4Q96EI5 215 aa20.18■□□□□ 0.82
HDAC4-217ENST00000553145 AVENQ9NQS1 362 aaPredicted RBP20.18■□□□□ 0.82
HDAC4-217ENST00000553145 TMLHEQ9NVH6 421 aa20.18■□□□□ 0.82
HDAC4-217ENST00000553145 IGSF9Q9P2J2 1179 aa20.18■□□□□ 0.82
HDAC4-217ENST00000553145 MRPS23Q9Y3D9 190 aaKnown RBP20.18■□□□□ 0.82
HDAC4-217ENST00000553145 PCDHA5Q9Y5H7 936 aa20.18■□□□□ 0.82
HDAC4-217ENST00000553145 ANHXE9PGG2 379 aa20.17■□□□□ 0.82
HDAC4-217ENST00000553145 CEBPBP17676 345 aa20.17■□□□□ 0.82
HDAC4-217ENST00000553145 COL9A1P20849 921 aa20.17■□□□□ 0.82
HDAC4-217ENST00000553145 ANP32AP39687 249 aaKnown RBP20.17■□□□□ 0.82
HDAC4-217ENST00000553145 MYO1EQ12965 1108 aa20.17■□□□□ 0.82
HDAC4-217ENST00000553145 TDGQ13569 410 aa20.17■□□□□ 0.82
HDAC4-217ENST00000553145 HTR4Q13639 388 aa20.17■□□□□ 0.82
HDAC4-217ENST00000553145 NFIL3Q16649 462 aa20.17■□□□□ 0.82
HDAC4-217ENST00000553145 CCDC142Q17RM4 750 aa20.17■□□□□ 0.82
HDAC4-217ENST00000553145 CEP135Q66GS9 1140 aa20.17■□□□□ 0.82
HDAC4-217ENST00000553145 UBALD2Q8IYN6 164 aa20.17■□□□□ 0.82
HDAC4-217ENST00000553145 TMEM86AQ8N2M4 240 aa20.17■□□□□ 0.82
HDAC4-217ENST00000553145 KBTBD7Q8WVZ9 684 aa20.17■□□□□ 0.82
HDAC4-217ENST00000553145 DDX43Q9NXZ2 648 aaKnown RBP20.17■□□□□ 0.82
HDAC4-217ENST00000553145 R3HCC1Q9Y3T6 440 aaKnown RBP20.17■□□□□ 0.82
HDAC4-217ENST00000553145 ZFP37Q9Y6Q3 630 aaPredicted RBP20.17■□□□□ 0.82
HDAC4-217ENST00000553145 GABRDO14764 452 aa20.16■□□□□ 0.82
HDAC4-217ENST00000553145 NARSO43776 548 aaKnown RBP20.16■□□□□ 0.82
HDAC4-217ENST00000553145 NR2F2P24468 414 aa20.16■□□□□ 0.82
HDAC4-217ENST00000553145 CLDN10P78369 228 aa20.16■□□□□ 0.82
HDAC4-217ENST00000553145 C1orf220Q5T0J3 134 aa20.16■□□□□ 0.82
HDAC4-217ENST00000553145 TDRD10Q5VZ19 366 aaKnown RBP20.16■□□□□ 0.82
HDAC4-217ENST00000553145 PARM1Q6UWI2 310 aa20.16■□□□□ 0.82
HDAC4-217ENST00000553145 ELMOD1Q8N336 334 aa20.16■□□□□ 0.82
HDAC4-217ENST00000553145 FGF14Q92915 247 aa20.16■□□□□ 0.82
HDAC4-217ENST00000553145 ZNF512Q96ME7 567 aaPredicted RBP20.16■□□□□ 0.82
HDAC4-217ENST00000553145 GSDMAQ96QA5 445 aa20.16■□□□□ 0.82
HDAC4-217ENST00000553145 PKMYT1Q99640 499 aa20.16■□□□□ 0.82
HDAC4-217ENST00000553145 RPP25Q9BUL9 199 aaKnown RBP20.16■□□□□ 0.82
HDAC4-217ENST00000553145 LRRC3Q9BY71 257 aa20.16■□□□□ 0.82
HDAC4-217ENST00000553145 RMND1Q9NWS8 449 aa20.16■□□□□ 0.82
HDAC4-217ENST00000553145 HSFX1Q9UBD0 423 aa20.16■□□□□ 0.82
HDAC4-217ENST00000553145 DUSP12Q9UNI6 340 aa20.16■□□□□ 0.82
HDAC4-217ENST00000553145 NUMBLQ9Y6R0 609 aa20.16■□□□□ 0.82
HDAC4-217ENST00000553145 MOSPD3O75425 235 aa20.15■□□□□ 0.82
HDAC4-217ENST00000553145 AKAP3O75969 853 aa20.15■□□□□ 0.82
HDAC4-217ENST00000553145 PDGFBP01127 241 aaPredicted RBP20.15■□□□□ 0.82
HDAC4-217ENST00000553145 C4BPAP04003 597 aaKnown RBP20.15■□□□□ 0.82
HDAC4-217ENST00000553145 ATF6P18850 670 aa20.15■□□□□ 0.82
HDAC4-217ENST00000553145 PRCPP42785 496 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms