RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 FAM227BQ96M60 508 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 NLRP4Q96MN2 994 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 FCRL3Q96P31 734 aaPredicted RBP5.72□□□□□ -1.49
CKAP4-203ENST00000553039 HHIPQ96QV1 700 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 CDC6Q99741 560 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 SLC6A16Q9GZN6 736 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 CSRNP2Q9H175 543 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 DNAJC25Q9H1X3 360 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 CYP4F11Q9HBI6 524 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 ETNK1Q9HBU6 452 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 SRA1Q9HD15 236 aaKnown RBP5.72□□□□□ -1.49
CKAP4-203ENST00000553039 ASAH2Q9NR71 780 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 DISC1Q9NRI5 854 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 MTRRQ9UBK8 725 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 NXF1Q9UBU9 619 aaKnown RBP5.72□□□□□ -1.49
CKAP4-203ENST00000553039 IL17BQ9UHF5 180 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 CDY1Q9Y6F8 540 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 KNTC1P50748 2209 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 ASCC3Q8N3C0 2202 aaKnown RBP5.72□□□□□ -1.49
CKAP4-203ENST00000553039 NOTCH2Q04721 2471 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 CREBBPQ92793 2442 aa5.72□□□□□ -1.49
CKAP4-203ENST00000553039 AKAP13Q12802 2813 aa5.71□□□□□ -1.49
CKAP4-203ENST00000553039 SPAG17Q6Q759 2223 aa5.71□□□□□ -1.49
CKAP4-203ENST00000553039 F8W810 466 aa5.71□□□□□ -1.5
CKAP4-203ENST00000553039 H7C4K7 107 aa5.71□□□□□ -1.5
CKAP4-203ENST00000553039 ZBTB39O15060 712 aa5.71□□□□□ -1.5
CKAP4-203ENST00000553039 ADAM12O43184 909 aa5.71□□□□□ -1.5
CKAP4-203ENST00000553039 ABLIM3O94929 683 aa5.71□□□□□ -1.5
CKAP4-203ENST00000553039 THP07101 528 aa5.71□□□□□ -1.5
CKAP4-203ENST00000553039 C6P13671 934 aa5.71□□□□□ -1.5
CKAP4-203ENST00000553039 HLA-EP13747 358 aa5.71□□□□□ -1.5
CKAP4-203ENST00000553039 MX1P20591 662 aa5.71□□□□□ -1.5
CKAP4-203ENST00000553039 FGFR3P22607 806 aa5.71□□□□□ -1.5
CKAP4-203ENST00000553039 EIF2S3P41091 472 aaKnown RBP5.71□□□□□ -1.5
CKAP4-203ENST00000553039 GALK1P51570 392 aa5.71□□□□□ -1.5
CKAP4-203ENST00000553039 COPS2P61201 443 aa5.71□□□□□ -1.5
CKAP4-203ENST00000553039 RACK1P63244 317 aaKnown RBP5.71□□□□□ -1.5
CKAP4-203ENST00000553039 SERINC3Q13530 473 aa5.71□□□□□ -1.5
CKAP4-203ENST00000553039 ARHGAP15Q53QZ3 475 aa5.71□□□□□ -1.5
CKAP4-203ENST00000553039 LYSMD4Q5XG99 296 aa5.71□□□□□ -1.5
CKAP4-203ENST00000553039 PPP1R18Q6NYC8 613 aa5.71□□□□□ -1.5
CKAP4-203ENST00000553039 NYAP1Q6ZVC0 841 aa5.71□□□□□ -1.5
CKAP4-203ENST00000553039 SLC9A9Q8IVB4 645 aa5.71□□□□□ -1.5
CKAP4-203ENST00000553039 ENGASEQ8NFI3 743 aa5.71□□□□□ -1.5
CKAP4-203ENST00000553039 BPIFB1Q8TDL5 484 aa5.71□□□□□ -1.5
CKAP4-203ENST00000553039 SPACA7Q96KW9 195 aa5.71□□□□□ -1.5
CKAP4-203ENST00000553039 ZFP42Q96MM3 310 aa5.71□□□□□ -1.5
CKAP4-203ENST00000553039 OSBPL2Q9H1P3 480 aa5.71□□□□□ -1.5
CKAP4-203ENST00000553039 PIF1Q9H611 641 aa5.71□□□□□ -1.5
CKAP4-203ENST00000553039 IFT122Q9HBG6 1241 aa5.71□□□□□ -1.5
CKAP4-203ENST00000553039 GKN1Q9NS71 199 aa5.71□□□□□ -1.5
CKAP4-203ENST00000553039 ZMYM5Q9UJ78 669 aa5.71□□□□□ -1.5
CKAP4-203ENST00000553039 PILRBQ9UKJ0 227 aa5.71□□□□□ -1.5
CKAP4-203ENST00000553039 COL4A3BPQ9Y5P4 624 aa5.71□□□□□ -1.5
CKAP4-203ENST00000553039 SPTAN1Q13813 2472 aaKnown RBP5.71□□□□□ -1.5
CKAP4-203ENST00000553039 MYH15Q9Y2K3 1946 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 GON4LQ3T8J9 2241 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 SHROOM3Q8TF72 1996 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 A0A0D9SFI3 127 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 ZBTB24O43167 697 aaPredicted RBP5.7□□□□□ -1.5
CKAP4-203ENST00000553039 AP5Z1O43299 807 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 SLC28A2O43868 658 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 DKC1O60832 514 aaKnown RBP eCLIP5.7□□□□□ -1.5
CKAP4-203ENST00000553039 NEFLP07196 543 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 CENPBP07199 599 aaPredicted RBP5.7□□□□□ -1.5
CKAP4-203ENST00000553039 CYP3A4P08684 503 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 GP1BBP13224 206 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 GNSP15586 552 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 ITPKBP27987 946 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 SREBF1P36956 1147 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 IL12RB1P42701 662 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 JAK3P52333 1124 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 SMTNP53814 917 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 EPHA5P54756 1037 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 SETQ01105 290 aaPredicted RBP5.7□□□□□ -1.5
CKAP4-203ENST00000553039 PRKCEQ02156 737 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 NMIQ13287 307 aaPredicted RBP5.7□□□□□ -1.5
CKAP4-203ENST00000553039 AP3B2Q13367 1082 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 PLD1Q13393 1074 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 DRP2Q13474 957 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 RUNX3Q13761 415 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 SUZ12Q15022 739 aaKnown RBP5.7□□□□□ -1.5
CKAP4-203ENST00000553039 TEAD2Q15562 447 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 MTERF2Q49AM1 385 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 WDR44Q5JSH3 913 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 SLC8B1Q6J4K2 584 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 FSTL4Q6MZW2 842 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 CC2D1AQ6P1N0 951 aaPredicted RBP5.7□□□□□ -1.5
CKAP4-203ENST00000553039 PKN3Q6P5Z2 889 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 SLC36A4Q6YBV0 504 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 SLCO6A1Q86UG4 719 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 KSR1Q8IVT5 923 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 MINDY1Q8N5J2 469 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 GSTCDQ8NEC7 633 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 RDM1Q8NG50 284 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 RPLP0P6Q8NHW5 317 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 SETD7Q8WTS6 366 aaKnown RBP5.7□□□□□ -1.5
CKAP4-203ENST00000553039 TCP11Q8WWU5 503 aa5.7□□□□□ -1.5
CKAP4-203ENST00000553039 PRPF31Q8WWY3 499 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms