RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 CLTAP09496 248 aa12.3□□□□□ -0.44
TMEM116-218ENST00000552839 KRT13P13646 458 aa12.3□□□□□ -0.44
TMEM116-218ENST00000552839 TGM1P22735 817 aa12.3□□□□□ -0.44
TMEM116-218ENST00000552839 AKAP5P24588 427 aa12.3□□□□□ -0.44
TMEM116-218ENST00000552839 GRM5P41594 1212 aa12.3□□□□□ -0.44
TMEM116-218ENST00000552839 ANO6Q4KMQ2 910 aa12.3□□□□□ -0.44
TMEM116-218ENST00000552839 RTP2Q5QGT7 225 aa12.3□□□□□ -0.44
TMEM116-218ENST00000552839 MTSS1LQ765P7 747 aa12.3□□□□□ -0.44
TMEM116-218ENST00000552839 CSGALNACT2Q8N6G5 542 aa12.3□□□□□ -0.44
TMEM116-218ENST00000552839 ANKRD20A12PQ8NF67 263 aa12.3□□□□□ -0.44
TMEM116-218ENST00000552839 ITFG1Q8TB96 612 aa12.3□□□□□ -0.44
TMEM116-218ENST00000552839 NELL1Q92832 810 aa12.3□□□□□ -0.44
TMEM116-218ENST00000552839 CLSTN3Q9BQT9 956 aa12.3□□□□□ -0.44
TMEM116-218ENST00000552839 DNAJC25Q9H1X3 360 aa12.3□□□□□ -0.44
TMEM116-218ENST00000552839 EPC1Q9H2F5 836 aa12.3□□□□□ -0.44
TMEM116-218ENST00000552839 ZSCAN32Q9NX65 697 aa12.3□□□□□ -0.44
TMEM116-218ENST00000552839 SNTG2Q9NY99 539 aa12.3□□□□□ -0.44
TMEM116-218ENST00000552839 RBAKQ9NYW8 714 aaPredicted RBP12.3□□□□□ -0.44
TMEM116-218ENST00000552839 RWDD2AQ9UIY3 292 aa12.3□□□□□ -0.44
TMEM116-218ENST00000552839 SMG5Q9UPR3 1016 aaKnown RBP12.3□□□□□ -0.44
TMEM116-218ENST00000552839 RALGAPA1Q6GYQ0 2036 aa12.29□□□□□ -0.44
TMEM116-218ENST00000552839 DCDC2BA2VCK2 349 aa12.29□□□□□ -0.44
TMEM116-218ENST00000552839 TRIM49BA6NDI0 452 aa12.29□□□□□ -0.44
TMEM116-218ENST00000552839 ZNF233A6NK53 670 aa12.29□□□□□ -0.44
TMEM116-218ENST00000552839 XPOTO43592 962 aaKnown RBP12.29□□□□□ -0.44
TMEM116-218ENST00000552839 TADA2AO75478 443 aa12.29□□□□□ -0.44
TMEM116-218ENST00000552839 RECQL4O94761 1208 aa12.29□□□□□ -0.44
TMEM116-218ENST00000552839 C8AP07357 584 aa12.29□□□□□ -0.44
TMEM116-218ENST00000552839 TPM2P07951 284 aa12.29□□□□□ -0.44
TMEM116-218ENST00000552839 HNRNPA1P09651 372 aaKnown RBP eCLIP12.29□□□□□ -0.44
TMEM116-218ENST00000552839 PROZP22891 400 aa12.29□□□□□ -0.44
TMEM116-218ENST00000552839 TARSP26639 723 aaKnown RBP12.29□□□□□ -0.44
TMEM116-218ENST00000552839 ERCC5P28715 1186 aaPredicted RBP12.29□□□□□ -0.44
TMEM116-218ENST00000552839 MAGEA9P43362 315 aa12.29□□□□□ -0.44
TMEM116-218ENST00000552839 FKBP3Q00688 224 aaKnown RBP12.29□□□□□ -0.44
TMEM116-218ENST00000552839 CREMQ03060 361 aa12.29□□□□□ -0.44
TMEM116-218ENST00000552839 ADAM9Q13443 819 aa12.29□□□□□ -0.44
TMEM116-218ENST00000552839 EDRF1Q3B7T1 1238 aa12.29□□□□□ -0.44
TMEM116-218ENST00000552839 SEZ6Q53EL9 994 aa12.29□□□□□ -0.44
TMEM116-218ENST00000552839 CT47A1Q5JQC4 288 aaPredicted RBP12.29□□□□□ -0.44
TMEM116-218ENST00000552839 PPM1LQ5SGD2 360 aa12.29□□□□□ -0.44
TMEM116-218ENST00000552839 TSSK4Q6SA08 328 aa12.29□□□□□ -0.44
TMEM116-218ENST00000552839 RSPO2Q6UXX9 243 aaPredicted RBP12.29□□□□□ -0.44
TMEM116-218ENST00000552839 FAM114A1Q8IWE2 563 aa12.29□□□□□ -0.44
TMEM116-218ENST00000552839 RDH13Q8NBN7 331 aa12.29□□□□□ -0.44
TMEM116-218ENST00000552839 SECISBP2LQ93073 1101 aaKnown RBP12.29□□□□□ -0.44
TMEM116-218ENST00000552839 FNBP1Q96RU3 617 aa12.29□□□□□ -0.44
TMEM116-218ENST00000552839 KXD1Q9BQD3 176 aa12.29□□□□□ -0.44
TMEM116-218ENST00000552839 PAAF1Q9BRP4 392 aa12.29□□□□□ -0.44
TMEM116-218ENST00000552839 IKZF4Q9H2S9 585 aa12.29□□□□□ -0.44
TMEM116-218ENST00000552839 KCTD10Q9H3F6 313 aa12.29□□□□□ -0.44
TMEM116-218ENST00000552839 TSPY26PQ9H489 355 aa12.29□□□□□ -0.44
TMEM116-218ENST00000552839 KLK14Q9P0G3 267 aa12.29□□□□□ -0.44
TMEM116-218ENST00000552839 CDV3Q9UKY7 258 aaKnown RBP12.29□□□□□ -0.44
TMEM116-218ENST00000552839 POLIQ9UNA4 740 aa12.29□□□□□ -0.44
TMEM116-218ENST00000552839 TRAF3IP3Q9Y228 551 aa12.29□□□□□ -0.44
TMEM116-218ENST00000552839 SPTBN2O15020 2390 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 A0A0B4J269 797 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 SMTNL1A8MU46 457 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 PRR5-ARHGAP8B1AHC4 643 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 PPP1R3GB7ZBB8 358 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 GOLGA6L19H0YKK7 550 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 CCL16O15467 120 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 TGFB1I1O43294 461 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 IL18RAPO95256 599 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 CAVIN2O95810 425 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 CXCL8P10145 99 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 CD44P16070 742 aaKnown RBP12.28□□□□□ -0.44
TMEM116-218ENST00000552839 HOXA9P31269 272 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 PSMC2P35998 433 aaKnown RBP12.28□□□□□ -0.44
TMEM116-218ENST00000552839 ACOT2P49753 483 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 ARHGAP8P85298 464 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 PFKPQ01813 784 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 LMNB2Q03252 620 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 GRIK3Q13003 919 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 FZD5Q13467 585 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 SURF1Q15526 300 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 SNRNP35Q16560 246 aaKnown RBP12.28□□□□□ -0.44
TMEM116-218ENST00000552839 ZBTB41Q5SVQ8 909 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 TCERG1LQ5VWI1 586 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 SLC39A4Q6P5W5 647 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 CEP57Q86XR8 500 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 FAM186BQ8IYM0 893 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 CEP120Q8N960 986 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 LNX1Q8TBB1 728 aaPredicted RBP12.28□□□□□ -0.44
TMEM116-218ENST00000552839 HASPINQ8TF76 798 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 PIK3R5Q8WYR1 880 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 CLDN23Q96B33 292 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 RTKNQ9BST9 563 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 PARD6AQ9NPB6 346 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 HCFC1R1Q9NWW0 138 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 TRIP11Q15643 1979 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 SF3B1O75533 1304 aaKnown RBP eCLIP12.28□□□□□ -0.443e-7■■■■■ 114.9
TMEM116-218ENST00000552839 FRYLO94915 3013 aa12.28□□□□□ -0.44
TMEM116-218ENST00000552839 SHISA7A6NL88 538 aa12.27□□□□□ -0.45
TMEM116-218ENST00000552839 PES1O00541 588 aaKnown RBP12.27□□□□□ -0.45
TMEM116-218ENST00000552839 SLC16A3O15427 465 aaKnown RBP12.27□□□□□ -0.45
TMEM116-218ENST00000552839 ADAM12O43184 909 aa12.27□□□□□ -0.45
TMEM116-218ENST00000552839 TMEM191BP0C7N4 346 aa12.27□□□□□ -0.45
TMEM116-218ENST00000552839 BMP6P22004 513 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms