RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 ABRAQ8N0Z2 381 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 SPICE1Q8N0Z3 855 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 FAM160A2Q8N612 972 aaPredicted RBP5.69□□□□□ -1.5
CCNT1-204ENST00000551989 NIPA2Q8N8Q9 360 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 RDH13Q8NBN7 331 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 FEZF2Q8TBJ5 459 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 MDM1Q8TC05 714 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 PLEKHO2Q8TD55 490 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 ACER1Q8TDN7 264 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 SYTL5Q8TDW5 730 aaPredicted RBP5.69□□□□□ -1.5
CCNT1-204ENST00000551989 FNIP1Q8TF40 1166 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 CLEC4DQ8WXI8 215 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 NKD2Q969F2 451 aaPredicted RBP5.69□□□□□ -1.5
CCNT1-204ENST00000551989 ZBTB9Q96C00 473 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 KLHL29Q96CT2 875 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 PRMT6Q96LA8 375 aaPredicted RBP5.69□□□□□ -1.5
CCNT1-204ENST00000551989 TGS1Q96RS0 853 aaKnown RBP5.69□□□□□ -1.5
CCNT1-204ENST00000551989 GMLQ99445 158 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 CGRRF1Q99675 332 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 JPH2Q9BR39 696 aaPredicted RBP5.69□□□□□ -1.5
CCNT1-204ENST00000551989 PDCD2LQ9BRP1 358 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 OSBPL8Q9BZF1 889 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 CCDC113Q9H0I3 377 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 PRDM16Q9HAZ2 1276 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 AS3MTQ9HBK9 375 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 PCDH9Q9HC56 1237 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 PXMP2Q9NR77 195 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 ARHGEF3Q9NR81 526 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 NINJ2Q9NZG7 142 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 PRKAG3Q9UGI9 489 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 UMODL1Q5DID0 1318 aa5.69□□□□□ -1.5
CCNT1-204ENST00000551989 EXOC1LA0A1B0GW35 172 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 TESPA1A2RU30 521 aaPredicted RBP5.68□□□□□ -1.5
CCNT1-204ENST00000551989 TCP11X1B4DZS4 312 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 TRAFD1O14545 582 aaPredicted RBP5.68□□□□□ -1.5
CCNT1-204ENST00000551989 TM9SF1O15321 606 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 FAM155BO75949 473 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 UBOX5O94941 541 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 UNC5CO95185 931 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 ACSL3O95573 720 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 C4BPAP04003 597 aaKnown RBP5.68□□□□□ -1.5
CCNT1-204ENST00000551989 WEE2P0C1S8 567 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 KRT5P13647 590 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 ATP2A2P16615 1042 aaKnown RBP5.68□□□□□ -1.5
CCNT1-204ENST00000551989 KLRC2P26717 231 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 ADSSP30520 456 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 GNA15P30679 374 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 POLR2BP30876 1174 aaKnown RBP5.68□□□□□ -1.5
CCNT1-204ENST00000551989 GBP2P32456 591 aaPredicted RBP5.68□□□□□ -1.5
CCNT1-204ENST00000551989 CDH5P33151 784 aaPredicted RBP5.68□□□□□ -1.5
CCNT1-204ENST00000551989 RFC5P40937 340 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 PIK3CAP42336 1068 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 MAGEA4P43358 317 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 LIG4P49917 911 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 POLGP54098 1239 aaPredicted RBP5.68□□□□□ -1.5
CCNT1-204ENST00000551989 MRPS9P82933 396 aaKnown RBP5.68□□□□□ -1.5
CCNT1-204ENST00000551989 CUL2Q13617 745 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 ZRSR2Q15696 482 aaKnown RBP5.68□□□□□ -1.5
CCNT1-204ENST00000551989 PDK4Q16654 411 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 LONRF1Q17RB8 773 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 XKR3Q5GH77 459 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 ARHGEF16Q5VV41 709 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 FYB2Q5VWT5 728 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 MIS18BP1Q6P0N0 1132 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 ZPBP2Q6X784 338 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 ASRGL1Q7L266 308 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 TRABD2AQ86V40 505 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 CCDC25Q86WR0 208 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 DNAAF5Q86Y56 855 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 KSR1Q8IVT5 923 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 ZDHHC14Q8IZN3 488 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 TEX9Q8N6V9 391 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 TAS1R2Q8TE23 839 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 FBXO41Q8TF61 875 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 SEMA4DQ92854 862 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 BICD1Q96G01 975 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 CEP170P1Q96L14 293 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 C12orf42Q96LP6 360 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 SMC6Q96SB8 1091 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 RBM15Q96T37 977 aaKnown RBP eCLIP5.68□□□□□ -1.58e-7■□□□□ 10.9
CCNT1-204ENST00000551989 MIS12Q9H081 205 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 LRMDAQ9H2I8 198 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 ECT2Q9H8V3 914 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 CD248Q9HCU0 757 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 PDLIM7Q9NR12 457 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 SAR1AQ9NR31 198 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 CHST7Q9NS84 486 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 FGFR1OP2Q9NVK5 253 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 DONSONQ9NYP3 566 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 ADAM22Q9P0K1 906 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 WDR35Q9P2L0 1181 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 PSMC3IPQ9P2W1 217 aaPredicted RBP5.68□□□□□ -1.5
CCNT1-204ENST00000551989 BAIAP2L1Q9UHR4 511 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 PTPN22Q9Y2R2 807 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 C15orf41Q9Y2V0 281 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 ZNF236Q9UL36 1845 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 MGAMO43451 1857 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 CLUHO75153 1309 aa5.68□□□□□ -1.5
CCNT1-204ENST00000551989 CITO14578 2027 aa5.67□□□□□ -1.5
CCNT1-204ENST00000551989 PLXNA1Q9UIW2 1896 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms