RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 CYP4A22Q5TCH4 519 aa20.44■□□□□ 0.86
DDX54-208ENST00000551344 LMBRD2Q68DH5 695 aaPredicted RBP20.44■□□□□ 0.86
DDX54-208ENST00000551344 SLC9A9Q8IVB4 645 aa20.44■□□□□ 0.86
DDX54-208ENST00000551344 TMEM86AQ8N2M4 240 aa20.44■□□□□ 0.86
DDX54-208ENST00000551344 LEMD2Q8NC56 503 aa20.44■□□□□ 0.86
DDX54-208ENST00000551344 SPATA18Q8TC71 538 aa20.44■□□□□ 0.86
DDX54-208ENST00000551344 TMEM209Q96SK2 561 aa20.44■□□□□ 0.86
DDX54-208ENST00000551344 RTP3Q9BQQ7 232 aa20.44■□□□□ 0.86
DDX54-208ENST00000551344 CORO1BQ9BR76 489 aa20.44■□□□□ 0.86
DDX54-208ENST00000551344 KCTD10Q9H3F6 313 aa20.44■□□□□ 0.86
DDX54-208ENST00000551344 DMAC2Q9NW81 257 aa20.44■□□□□ 0.86
DDX54-208ENST00000551344 GDE1Q9NZC3 331 aa20.44■□□□□ 0.86
DDX54-208ENST00000551344 DUSP12Q9UNI6 340 aa20.44■□□□□ 0.86
DDX54-208ENST00000551344 MTMR11A4FU01 709 aa20.43■□□□□ 0.86
DDX54-208ENST00000551344 PRR29P0C7W0 189 aa20.43■□□□□ 0.86
DDX54-208ENST00000551344 DLATP10515 647 aaKnown RBP20.43■□□□□ 0.86
DDX54-208ENST00000551344 ALDH1A3P47895 512 aa20.43■□□□□ 0.86
DDX54-208ENST00000551344 TUFMP49411 452 aaKnown RBP20.43■□□□□ 0.86
DDX54-208ENST00000551344 BFSP1Q12934 665 aa20.43■□□□□ 0.86
DDX54-208ENST00000551344 HTR4Q13639 388 aa20.43■□□□□ 0.86
DDX54-208ENST00000551344 DPH6Q7L8W6 267 aa20.43■□□□□ 0.86
DDX54-208ENST00000551344 TRAPPC11Q7Z392 1133 aa20.43■□□□□ 0.86
DDX54-208ENST00000551344 FBXL6Q8N531 539 aa20.43■□□□□ 0.86
DDX54-208ENST00000551344 TOP6BLQ8N6T0 577 aa20.43■□□□□ 0.86
DDX54-208ENST00000551344 ATAD1Q8NBU5 361 aa20.43■□□□□ 0.86
DDX54-208ENST00000551344 C2orf15Q8WU43 125 aaKnown RBP20.43■□□□□ 0.86
DDX54-208ENST00000551344 RSAD2Q8WXG1 361 aa20.43■□□□□ 0.86
DDX54-208ENST00000551344 CCDC127Q96BQ5 260 aa20.43■□□□□ 0.86
DDX54-208ENST00000551344 CGRRF1Q99675 332 aa20.43■□□□□ 0.86
DDX54-208ENST00000551344 SMOC2Q9H3U7 446 aa20.43■□□□□ 0.86
DDX54-208ENST00000551344 CEP72Q9P209 647 aa20.43■□□□□ 0.86
DDX54-208ENST00000551344 YIPF1Q9Y548 306 aa20.43■□□□□ 0.86
DDX54-208ENST00000551344 SNX9Q9Y5X1 595 aa20.43■□□□□ 0.86
DDX54-208ENST00000551344 PTPRJQ12913 1337 aa20.43■□□□□ 0.86
DDX54-208ENST00000551344 EPHB3P54753 998 aa20.42■□□□□ 0.86
DDX54-208ENST00000551344 SLC39A12Q504Y0 691 aa20.42■□□□□ 0.86
DDX54-208ENST00000551344 PRSS36Q5K4E3 855 aa20.42■□□□□ 0.86
DDX54-208ENST00000551344 SCARA3Q6AZY7 606 aa20.42■□□□□ 0.86
DDX54-208ENST00000551344 MTSS1LQ765P7 747 aa20.42■□□□□ 0.86
DDX54-208ENST00000551344 PDZD4Q76G19 769 aaPredicted RBP20.42■□□□□ 0.86
DDX54-208ENST00000551344 SUGP1Q8IWZ8 645 aaKnown RBP20.42■□□□□ 0.86
DDX54-208ENST00000551344 NPAS3Q8IXF0 933 aa20.42■□□□□ 0.86
DDX54-208ENST00000551344 DCP1BQ8IZD4 617 aaKnown RBP20.42■□□□□ 0.86
DDX54-208ENST00000551344 FMR1NBQ8N0W7 255 aaPredicted RBP20.42■□□□□ 0.86
DDX54-208ENST00000551344 PDCL2Q8N4E4 241 aa20.42■□□□□ 0.86
DDX54-208ENST00000551344 HPDLQ96IR7 371 aa20.42■□□□□ 0.86
DDX54-208ENST00000551344 FAM84AQ96KN4 292 aa20.42■□□□□ 0.86
DDX54-208ENST00000551344 ACBD6Q9BR61 282 aa20.42■□□□□ 0.86
DDX54-208ENST00000551344 CRISPLD1Q9H336 500 aa20.42■□□□□ 0.86
DDX54-208ENST00000551344 CIZ1Q9ULV3 898 aaPredicted RBP20.42■□□□□ 0.86
DDX54-208ENST00000551344 SLC27A5Q9Y2P5 690 aa20.42■□□□□ 0.86
DDX54-208ENST00000551344 ASB3Q9Y575 518 aa20.42■□□□□ 0.86
DDX54-208ENST00000551344 NOTCH4Q99466 2003 aa20.41■□□□□ 0.86
DDX54-208ENST00000551344 LHX1P48742 406 aa20.41■□□□□ 0.86
DDX54-208ENST00000551344 EPHA5P54756 1037 aa20.41■□□□□ 0.86
DDX54-208ENST00000551344 SLC5A9Q2M3M2 681 aa20.41■□□□□ 0.86
DDX54-208ENST00000551344 LRRTM3Q86VH5 581 aa20.41■□□□□ 0.86
DDX54-208ENST00000551344 KCNH6Q9H252 994 aa20.41■□□□□ 0.86
DDX54-208ENST00000551344 ASAH2Q9NR71 780 aa20.41■□□□□ 0.86
DDX54-208ENST00000551344 RAPGEFL1Q9UHV5 662 aa20.41■□□□□ 0.86
DDX54-208ENST00000551344 L1RE1Q9UN81 338 aa20.41■□□□□ 0.86
DDX54-208ENST00000551344 TRAF3IP3Q9Y228 551 aa20.41■□□□□ 0.86
DDX54-208ENST00000551344 NUMBLQ9Y6R0 609 aa20.41■□□□□ 0.86
DDX54-208ENST00000551344 CALUO43852 315 aaPredicted RBP20.4■□□□□ 0.86
DDX54-208ENST00000551344 CST3P01034 146 aaPredicted RBP20.4■□□□□ 0.86
DDX54-208ENST00000551344 SRFP11831 508 aa20.4■□□□□ 0.86
DDX54-208ENST00000551344 AP3M2P53677 418 aa20.4■□□□□ 0.86
DDX54-208ENST00000551344 MYL7Q01449 175 aa20.4■□□□□ 0.86
DDX54-208ENST00000551344 TSPY1Q01534 308 aa20.4■□□□□ 0.86
DDX54-208ENST00000551344 SNW1Q13573 536 aaKnown RBP20.4■□□□□ 0.86
DDX54-208ENST00000551344 NFE2Q16621 373 aaPredicted RBP20.4■□□□□ 0.86
DDX54-208ENST00000551344 PARM1Q6UWI2 310 aa20.4■□□□□ 0.86
DDX54-208ENST00000551344 LIMS2Q7Z4I7 341 aa20.4■□□□□ 0.86
DDX54-208ENST00000551344 GUF1Q8N442 669 aaKnown RBP20.4■□□□□ 0.86
DDX54-208ENST00000551344 ENGASEQ8NFI3 743 aa20.4■□□□□ 0.86
DDX54-208ENST00000551344 SPPL2BQ8TCT7 592 aa20.4■□□□□ 0.86
DDX54-208ENST00000551344 FGF14Q92915 247 aa20.4■□□□□ 0.86
DDX54-208ENST00000551344 DDX43Q9NXZ2 648 aaKnown RBP20.4■□□□□ 0.86
DDX54-208ENST00000551344 WNT16Q9UBV4 365 aa20.4■□□□□ 0.86
DDX54-208ENST00000551344 GABRDO14764 452 aa20.39■□□□□ 0.85
DDX54-208ENST00000551344 NR3C1P04150 777 aa20.39■□□□□ 0.85
DDX54-208ENST00000551344 FAM163BP0C2L3 166 aa20.39■□□□□ 0.85
DDX54-208ENST00000551344 CLDN10P78369 228 aa20.39■□□□□ 0.85
DDX54-208ENST00000551344 FAM160A1Q05DH4 1040 aa20.39■□□□□ 0.85
DDX54-208ENST00000551344 SOWAHAQ2M3V2 549 aa20.39■□□□□ 0.85
DDX54-208ENST00000551344 ITIH5Q86UX2 942 aa20.39■□□□□ 0.85
DDX54-208ENST00000551344 HS6ST3Q8IZP7 471 aa20.39■□□□□ 0.85
DDX54-208ENST00000551344 PARD3BQ8TEW8 1205 aa20.39■□□□□ 0.85
DDX54-208ENST00000551344 ING5Q8WYH8 240 aa20.39■□□□□ 0.85
DDX54-208ENST00000551344 ZNF516Q92618 1163 aa20.39■□□□□ 0.85
DDX54-208ENST00000551344 MCRS1Q96EZ8 462 aa20.39■□□□□ 0.85
DDX54-208ENST00000551344 TIGD1Q96MW7 591 aa20.39■□□□□ 0.85
DDX54-208ENST00000551344 GZF1Q9H116 711 aaPredicted RBP20.39■□□□□ 0.85
DDX54-208ENST00000551344 DNAJC25Q9H1X3 360 aa20.39■□□□□ 0.85
DDX54-208ENST00000551344 ZDBF2Q9HCK1 2354 aa20.38■□□□□ 0.85
DDX54-208ENST00000551344 NARSO43776 548 aaKnown RBP20.38■□□□□ 0.85
DDX54-208ENST00000551344 PCSK1P29120 753 aa20.38■□□□□ 0.85
DDX54-208ENST00000551344 CCR2P41597 374 aa20.38■□□□□ 0.85
DDX54-208ENST00000551344 TRPC3Q13507 836 aa20.38■□□□□ 0.85
DDX54-208ENST00000551344 NFIL3Q16649 462 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms