RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 MAPK13O15264 365 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 RIPK2O43353 540 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 TIMM44O43615 452 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 PEX1O43933 1283 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 COBLO75128 1261 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 ATRNO75882 1429 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 DCTN3O75935 186 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 NOL4O94818 638 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 ZWINTO95229 277 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 FTCDO95954 541 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 CAPNS1P04632 268 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 SERPING1P05155 500 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 EIF2S1P05198 315 aaKnown RBP5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 USP17L7P0C7H9 530 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 UBTFL6P0CB48 400 aaPredicted RBP5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 PYGMP11217 842 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 XRCC5P13010 732 aaKnown RBP5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 ETS2P15036 469 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 HOXD10P28358 340 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 SERPINB3P29508 390 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 SLC5A2P31639 672 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 GUCY1A2P33402 732 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 VPS41P49754 854 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 GALK1P51570 392 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 CASP7P55210 303 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 CABP4P57796 275 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 SSRP1Q08945 709 aaKnown RBP5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 TFCP2Q12800 502 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 TRIM28Q13263 835 aaKnown RBP5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 MSLNQ13421 630 aaPredicted RBP5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 IKBKEQ14164 716 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 SLC29A2Q14542 456 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 KIF22Q14807 665 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 FRMPD4Q14CM0 1322 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 TGFBIQ15582 683 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 GRIK4Q16099 956 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 SLC18A3Q16572 532 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 NDUFA5Q16718 116 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 TRIM71Q2Q1W2 868 aaKnown RBP5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 VWA3BQ502W6 1294 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 SOGA3Q5TF21 947 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 DENND2CQ68D51 928 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 CENPPQ6IPU0 288 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 C16orf87Q6PH81 154 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 DCLRE1AQ6PJP8 1040 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 SHISA2Q6UWI4 295 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 DTHD1Q6ZMT9 781 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 TMTC3Q6ZXV5 915 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 TRMT10CQ7L0Y3 403 aaKnown RBP5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 TAOK1Q7L7X3 1001 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 OTUD6AQ7L8S5 288 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 SAPCD2Q86UD0 394 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 PDSS2Q86YH6 399 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 C2CD5Q86YS7 1000 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 CRACR2BQ8N4Y2 399 aaPredicted RBP5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 USHBP1Q8N6Y0 703 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 ARL10Q8N8L6 244 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 OLIG1Q8TAK6 271 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 ESR2Q92731 530 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 P2RX5Q93086 422 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 EFHD2Q96C19 240 aaPredicted RBP5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 KLHDC7BQ96G42 594 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 HES6Q96HZ4 224 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 PPP1R10Q96QC0 940 aaKnown RBP5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 PSMB7Q99436 277 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 DDX50Q9BQ39 737 aaKnown RBP5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 NEURL2Q9BR09 285 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 UNKQ9C0B0 810 aaKnown RBP5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 CUEDC2Q9H467 287 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 RETREG1Q9H6L5 497 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 PLGRKTQ9HBL7 147 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 OSGEPQ9NPF4 335 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 KBTBD4Q9NVX7 518 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 PAG1Q9NWQ8 432 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 ARHGEF38Q9NXL2 777 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 UBAP1Q9NZ09 502 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 GGT7Q9UJ14 662 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 HAO1Q9UJM8 370 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 ZNF180Q9UJW8 692 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 ASAP1Q9ULH1 1129 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 MAP3K2Q9Y2U5 619 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 NOC2LQ9Y3T9 749 aaKnown RBP5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 CD2APQ9Y5K6 639 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 SNX9Q9Y5X1 595 aa5.61□□□□□ -1.51
LSM3P2-201ENST00000551246 MYH13Q9UKX3 1938 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 C10orf71Q711Q0 1435 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 PRR36Q9H6K5 1346 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 TRIM64BA6NI03 449 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 LRRC53A6NM62 1247 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 CAPN9O14815 690 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 RASGRF2O14827 1237 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 CASQ2O14958 399 aaPredicted RBP5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 NKRFO15226 690 aaKnown RBP eCLIP5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 TP73O15350 636 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 MAGEB3O15480 346 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 DDX3YO15523 660 aaKnown RBP5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 ZBTB43O43298 467 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 DENRO43583 198 aaKnown RBP5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 BUB1O43683 1085 aa5.6□□□□□ -1.51
LSM3P2-201ENST00000551246 EDF1O60869 148 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms