RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 MXD4Q14582 209 aaPredicted RBP12.41□□□□□ -0.42
GPN3-208ENST00000550974 SMAD1Q15797 465 aaKnown RBP12.41□□□□□ -0.42
GPN3-208ENST00000550974 PREPLQ4J6C6 727 aaPredicted RBP12.41□□□□□ -0.42
GPN3-208ENST00000550974 DNAJB7Q7Z6W7 309 aaPredicted RBP12.41□□□□□ -0.42
GPN3-208ENST00000550974 IFNLR1Q8IU57 520 aaPredicted RBP12.41□□□□□ -0.42
GPN3-208ENST00000550974 MB21D2Q8IYB1 491 aaPredicted RBP12.41□□□□□ -0.42
GPN3-208ENST00000550974 ZNF513Q8N8E2 541 aaPredicted RBP12.41□□□□□ -0.42
GPN3-208ENST00000550974 CCDC26Q8TAB7 109 aa12.41□□□□□ -0.42
GPN3-208ENST00000550974 RHBDD1Q8TEB9 315 aa12.41□□□□□ -0.42
GPN3-208ENST00000550974 UROC1Q96N76 676 aa12.41□□□□□ -0.42
GPN3-208ENST00000550974 MTRQ99707 1265 aa12.41□□□□□ -0.42
GPN3-208ENST00000550974 SLC46A2Q9BY10 475 aa12.41□□□□□ -0.42
GPN3-208ENST00000550974 IL25Q9H293 177 aa12.41□□□□□ -0.42
GPN3-208ENST00000550974 CCL26Q9Y258 94 aa12.41□□□□□ -0.42
GPN3-208ENST00000550974 GDAQ9Y2T3 454 aa12.41□□□□□ -0.42
GPN3-208ENST00000550974 GTF3C3Q9Y5Q9 886 aa12.41□□□□□ -0.42
GPN3-208ENST00000550974 SLC12A7Q9Y666 1083 aa12.41□□□□□ -0.42
GPN3-208ENST00000550974 NUP210Q8TEM1 1887 aaPredicted RBP12.4□□□□□ -0.42
GPN3-208ENST00000550974 A0A1W2PQD8 194 aa12.4□□□□□ -0.42
GPN3-208ENST00000550974 HIP1O00291 1037 aa12.4□□□□□ -0.42
GPN3-208ENST00000550974 SYN3O14994 580 aa12.4□□□□□ -0.42
GPN3-208ENST00000550974 FGF19O95750 216 aa12.4□□□□□ -0.42
GPN3-208ENST00000550974 CCDC173Q0VFZ6 552 aa12.4□□□□□ -0.42
GPN3-208ENST00000550974 GRIK2Q13002 908 aa12.4□□□□□ -0.42
GPN3-208ENST00000550974 DUSP4Q13115 394 aa12.4□□□□□ -0.42
GPN3-208ENST00000550974 CAPSQ13938 189 aa12.4□□□□□ -0.42
GPN3-208ENST00000550974 ZNF280DQ6N043 979 aa12.4□□□□□ -0.42
GPN3-208ENST00000550974 MICU3Q86XE3 530 aa12.4□□□□□ -0.42
GPN3-208ENST00000550974 NOSTRINQ8IVI9 506 aa12.4□□□□□ -0.42
GPN3-208ENST00000550974 RGL4Q8IZJ4 473 aa12.4□□□□□ -0.42
GPN3-208ENST00000550974 TMTC2Q8N394 836 aa12.4□□□□□ -0.42
GPN3-208ENST00000550974 CPA6Q8N4T0 437 aa12.4□□□□□ -0.42
GPN3-208ENST00000550974 HMGB4Q8WW32 186 aa12.4□□□□□ -0.42
GPN3-208ENST00000550974 CDC6Q99741 560 aa12.4□□□□□ -0.42
GPN3-208ENST00000550974 CRISPLD1Q9H336 500 aa12.4□□□□□ -0.42
GPN3-208ENST00000550974 ECT2Q9H8V3 914 aa12.4□□□□□ -0.42
GPN3-208ENST00000550974 SLC27A5Q9Y2P5 690 aa12.4□□□□□ -0.42
GPN3-208ENST00000550974 TEP1Q99973 2627 aaKnown RBP12.39□□□□□ -0.43
GPN3-208ENST00000550974 hCG_1984214I3L0E3 225 aa12.39□□□□□ -0.43
GPN3-208ENST00000550974 K7EQS6 105 aa12.39□□□□□ -0.43
GPN3-208ENST00000550974 SH2B2O14492 632 aaPredicted RBP12.39□□□□□ -0.43
GPN3-208ENST00000550974 PRC1O43663 620 aa12.39□□□□□ -0.43
GPN3-208ENST00000550974 PI4KAP42356 2102 aa12.39□□□□□ -0.43
GPN3-208ENST00000550974 QARSP47897 775 aaKnown RBP12.39□□□□□ -0.43
GPN3-208ENST00000550974 HNRNPUQ00839 825 aaKnown RBP eCLIP12.39□□□□□ -0.43
GPN3-208ENST00000550974 BFSP1Q12934 665 aa12.39□□□□□ -0.43
GPN3-208ENST00000550974 PDGFRLQ15198 375 aa12.39□□□□□ -0.43
GPN3-208ENST00000550974 TMEM132AQ24JP5 1023 aa12.39□□□□□ -0.43
GPN3-208ENST00000550974 C4orf17Q53FE4 359 aa12.39□□□□□ -0.43
GPN3-208ENST00000550974 C6orf118Q5T5N4 469 aa12.39□□□□□ -0.43
GPN3-208ENST00000550974 DHRS13Q6UX07 377 aa12.39□□□□□ -0.43
GPN3-208ENST00000550974 SLC36A4Q6YBV0 504 aa12.39□□□□□ -0.43
GPN3-208ENST00000550974 REXO1Q8N1G1 1221 aaKnown RBP12.39□□□□□ -0.43
GPN3-208ENST00000550974 ZNF713Q8N859 430 aaPredicted RBP12.39□□□□□ -0.43
GPN3-208ENST00000550974 TTC16Q8NEE8 873 aa12.39□□□□□ -0.43
GPN3-208ENST00000550974 ASAP3Q8TDY4 903 aa12.39□□□□□ -0.43
GPN3-208ENST00000550974 PPP1R10Q96QC0 940 aaKnown RBP12.39□□□□□ -0.43
GPN3-208ENST00000550974 IL21RQ9HBE5 538 aa12.39□□□□□ -0.43
GPN3-208ENST00000550974 PPME1Q9Y570 386 aa12.39□□□□□ -0.43
GPN3-208ENST00000550974 PAXBP1Q9Y5B6 917 aa12.39□□□□□ -0.43
GPN3-208ENST00000550974 TSC2P49815 1807 aa12.39□□□□□ -0.43
GPN3-208ENST00000550974 MARCH6O60337 910 aa12.38□□□□□ -0.43
GPN3-208ENST00000550974 VNN2O95498 520 aa12.38□□□□□ -0.43
GPN3-208ENST00000550974 OR4Q2P0C623 313 aa12.38□□□□□ -0.43
GPN3-208ENST00000550974 AVPR1AP37288 418 aa12.38□□□□□ -0.43
GPN3-208ENST00000550974 CCR10P46092 362 aa12.38□□□□□ -0.43
GPN3-208ENST00000550974 POU5F1BQ06416 359 aa12.38□□□□□ -0.43
GPN3-208ENST00000550974 KCNH2Q12809 1159 aa12.38□□□□□ -0.43
GPN3-208ENST00000550974 XKR9Q5GH70 373 aa12.38□□□□□ -0.43
GPN3-208ENST00000550974 B3GNT9Q6UX72 402 aa12.38□□□□□ -0.43
GPN3-208ENST00000550974 SLC41A1Q8IVJ1 513 aa12.38□□□□□ -0.43
GPN3-208ENST00000550974 SPACA3Q8IXA5 215 aa12.38□□□□□ -0.43
GPN3-208ENST00000550974 CMTM8Q8IZV2 173 aa12.38□□□□□ -0.43
GPN3-208ENST00000550974 ALLCQ8N6M5 410 aa12.38□□□□□ -0.43
GPN3-208ENST00000550974 TRIML1Q8N9V2 468 aa12.38□□□□□ -0.43
GPN3-208ENST00000550974 TXNDC5Q8NBS9 432 aaKnown RBP12.38□□□□□ -0.43
GPN3-208ENST00000550974 SNIP1Q8TAD8 396 aaKnown RBP12.38□□□□□ -0.43
GPN3-208ENST00000550974 RIN3Q8TB24 985 aa12.38□□□□□ -0.43
GPN3-208ENST00000550974 BAHD1Q8TBE0 780 aaPredicted RBP12.38□□□□□ -0.43
GPN3-208ENST00000550974 USP13Q92995 863 aaPredicted RBP12.38□□□□□ -0.43
GPN3-208ENST00000550974 PSMG2Q969U7 264 aa12.38□□□□□ -0.43
GPN3-208ENST00000550974 HSPA12BQ96MM6 686 aa12.38□□□□□ -0.43
GPN3-208ENST00000550974 GCNAQ96QF7 691 aa12.38□□□□□ -0.43
GPN3-208ENST00000550974 TM7SF3Q9NS93 570 aa12.38□□□□□ -0.43
GPN3-208ENST00000550974 WRAP73Q9P2S5 460 aaPredicted RBP12.38□□□□□ -0.43
GPN3-208ENST00000550974 NUB1Q9Y5A7 615 aa12.38□□□□□ -0.43
GPN3-208ENST00000550974 KIAA1549LQ6ZVL6 1849 aa12.37□□□□□ -0.43
GPN3-208ENST00000550974 TCRBV21S2A2A0A5A6 115 aa12.37□□□□□ -0.43
GPN3-208ENST00000550974 SGK1O00141 431 aa12.37□□□□□ -0.43
GPN3-208ENST00000550974 PODXLO00592 558 aa12.37□□□□□ -0.43
GPN3-208ENST00000550974 EDIL3O43854 480 aa12.37□□□□□ -0.43
GPN3-208ENST00000550974 DKC1O60832 514 aaKnown RBP eCLIP12.37□□□□□ -0.43
GPN3-208ENST00000550974 SOAT2O75908 522 aa12.37□□□□□ -0.43
GPN3-208ENST00000550974 MYO1EQ12965 1108 aa12.37□□□□□ -0.43
GPN3-208ENST00000550974 ARHGAP40Q5TG30 622 aa12.37□□□□□ -0.43
GPN3-208ENST00000550974 SGMS1Q86VZ5 419 aa12.37□□□□□ -0.43
GPN3-208ENST00000550974 MED8Q96G25 268 aa12.37□□□□□ -0.43
GPN3-208ENST00000550974 ZDHHC5Q9C0B5 715 aa12.37□□□□□ -0.43
GPN3-208ENST00000550974 FAM124BQ9H5Z6 455 aaPredicted RBP12.37□□□□□ -0.43
GPN3-208ENST00000550974 C6orf50Q9HD87 102 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms