RNA–Protein interactions for RNA: ENST00000550543.1

TPCN1-213, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-213ENST00000550543 SMC3Q9UQE7 1217 aa15.4■□□□□ 0.06
TPCN1-213ENST00000550543 TIMM13Q9Y5L4 95 aaPredicted RBP15.4■□□□□ 0.06
TPCN1-213ENST00000550543 TRIP11Q15643 1979 aa15.4■□□□□ 0.06
TPCN1-213ENST00000550543 PATJQ8NI35 1801 aa15.39■□□□□ 0.05
TPCN1-213ENST00000550543 ARNTLO00327 626 aa15.39■□□□□ 0.05
TPCN1-213ENST00000550543 ATG13O75143 517 aa15.39■□□□□ 0.05
TPCN1-213ENST00000550543 IL18RAPO95256 599 aa15.39■□□□□ 0.05
TPCN1-213ENST00000550543 TDGF1P13385 188 aa15.39■□□□□ 0.05
TPCN1-213ENST00000550543 GABRR2P28476 465 aa15.39■□□□□ 0.05
TPCN1-213ENST00000550543 TXLNAP40222 546 aa15.39■□□□□ 0.05
TPCN1-213ENST00000550543 TAF6P49848 677 aa15.39■□□□□ 0.05
TPCN1-213ENST00000550543 SPAG1Q07617 926 aa15.39■□□□□ 0.05
TPCN1-213ENST00000550543 SV2CQ496J9 727 aa15.39■□□□□ 0.05
TPCN1-213ENST00000550543 ARSHQ5FYA8 562 aa15.39■□□□□ 0.05
TPCN1-213ENST00000550543 GPR158Q5T848 1215 aa15.39■□□□□ 0.05
TPCN1-213ENST00000550543 ADALQ6DHV7 355 aa15.39■□□□□ 0.05
TPCN1-213ENST00000550543 JADE1Q6IE81 842 aa15.39■□□□□ 0.05
TPCN1-213ENST00000550543 TSSK4Q6SA08 328 aa15.39■□□□□ 0.05
TPCN1-213ENST00000550543 ATAD1Q8NBU5 361 aa15.39■□□□□ 0.05
TPCN1-213ENST00000550543 BPIFB1Q8TDL5 484 aa15.39■□□□□ 0.05
TPCN1-213ENST00000550543 DDX1Q92499 740 aaKnown RBP15.39■□□□□ 0.05
TPCN1-213ENST00000550543 RAD54LQ92698 747 aa15.39■□□□□ 0.05
TPCN1-213ENST00000550543 KIF2CQ99661 725 aa15.39■□□□□ 0.05
TPCN1-213ENST00000550543 LRRC3Q9BY71 257 aa15.39■□□□□ 0.05
TPCN1-213ENST00000550543 CCSER1Q9C0I3 900 aa15.39■□□□□ 0.05
TPCN1-213ENST00000550543 ZHX3Q9H4I2 956 aa15.39■□□□□ 0.05
TPCN1-213ENST00000550543 KIF9Q9HAQ2 790 aa15.39■□□□□ 0.05
TPCN1-213ENST00000550543 SEL1LQ9UBV2 794 aa15.39■□□□□ 0.05
TPCN1-213ENST00000550543 CCDC39Q9UFE4 941 aa15.39■□□□□ 0.05
TPCN1-213ENST00000550543 ANO9A1A5B4 782 aa15.38■□□□□ 0.05
TPCN1-213ENST00000550543 SHISA7A6NL88 538 aa15.38■□□□□ 0.05
TPCN1-213ENST00000550543 SPECC1L-ADORA2AF8WAN1 911 aa15.38■□□□□ 0.05
TPCN1-213ENST00000550543 PIRO00625 290 aa15.38■□□□□ 0.05
TPCN1-213ENST00000550543 FAM189A1O60320 539 aa15.38■□□□□ 0.05
TPCN1-213ENST00000550543 GJA1P17302 382 aa15.38■□□□□ 0.05
TPCN1-213ENST00000550543 PDCP20941 246 aa15.38■□□□□ 0.05
TPCN1-213ENST00000550543 GJB2P29033 226 aa15.38■□□□□ 0.05
TPCN1-213ENST00000550543 CTHP32929 405 aa15.38■□□□□ 0.05
TPCN1-213ENST00000550543 TNFSF9P41273 254 aa15.38■□□□□ 0.05
TPCN1-213ENST00000550543 TSPY1Q01534 308 aa15.38■□□□□ 0.05
TPCN1-213ENST00000550543 SIM2Q14190 667 aaPredicted RBP15.38■□□□□ 0.05
TPCN1-213ENST00000550543 NFE2Q16621 373 aaPredicted RBP15.38■□□□□ 0.05
TPCN1-213ENST00000550543 MGAT5BQ3V5L5 792 aa15.38■□□□□ 0.05
TPCN1-213ENST00000550543 PRR23BQ6ZRT6 265 aa15.38■□□□□ 0.05
TPCN1-213ENST00000550543 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.38■□□□□ 0.05
TPCN1-213ENST00000550543 CCDC26Q8TAB7 109 aa15.38■□□□□ 0.05
TPCN1-213ENST00000550543 LARP4BQ92615 738 aaKnown RBP15.38■□□□□ 0.05
TPCN1-213ENST00000550543 TMX3Q96JJ7 454 aa15.38■□□□□ 0.05
TPCN1-213ENST00000550543 SEPT5Q99719 369 aaPredicted RBP15.38■□□□□ 0.05
TPCN1-213ENST00000550543 ZCWPW1Q9H0M4 648 aa15.38■□□□□ 0.05
TPCN1-213ENST00000550543 DNAJC25Q9H1X3 360 aa15.38■□□□□ 0.05
TPCN1-213ENST00000550543 STK17AQ9UEE5 414 aa15.38■□□□□ 0.05
TPCN1-213ENST00000550543 AGO2Q9UKV8 859 aaKnown RBP15.38■□□□□ 0.05
TPCN1-213ENST00000550543 CCDC163A0A0D9SF12 145 aa15.37■□□□□ 0.05
TPCN1-213ENST00000550543 NPHP3-ACAD11A0A0J9YXS1 232 aa15.37■□□□□ 0.05
TPCN1-213ENST00000550543 MED19A0JLT2 244 aaPredicted RBP15.37■□□□□ 0.05
TPCN1-213ENST00000550543 CYB561D2O14569 222 aa15.37■□□□□ 0.05
TPCN1-213ENST00000550543 OR4Q2P0C623 313 aa15.37■□□□□ 0.05
TPCN1-213ENST00000550543 GAP43P17677 238 aa15.37■□□□□ 0.05
TPCN1-213ENST00000550543 AVPR1AP37288 418 aa15.37■□□□□ 0.05
TPCN1-213ENST00000550543 CACNB1Q02641 598 aaPredicted RBP15.37■□□□□ 0.05
TPCN1-213ENST00000550543 ALCAMQ13740 583 aa15.37■□□□□ 0.05
TPCN1-213ENST00000550543 DHX8Q14562 1220 aaKnown RBP15.37■□□□□ 0.05
TPCN1-213ENST00000550543 ITPRIPL2Q3MIP1 535 aa15.37■□□□□ 0.05
TPCN1-213ENST00000550543 SLC39A12Q504Y0 691 aa15.37■□□□□ 0.05
TPCN1-213ENST00000550543 LARP1BQ659C4 914 aaKnown RBP15.37■□□□□ 0.05
TPCN1-213ENST00000550543 POTEHQ6S545 545 aa15.37■□□□□ 0.05
TPCN1-213ENST00000550543 SPATA18Q8TC71 538 aa15.37■□□□□ 0.05
TPCN1-213ENST00000550543 CACTINQ8WUQ7 758 aaKnown RBP15.37■□□□□ 0.05
TPCN1-213ENST00000550543 HAPLN2Q9GZV7 340 aa15.37■□□□□ 0.05
TPCN1-213ENST00000550543 DPP3Q9NY33 737 aa15.37■□□□□ 0.05
TPCN1-213ENST00000550543 UXTQ9UBK9 157 aaPredicted RBP15.37■□□□□ 0.05
TPCN1-213ENST00000550543 SLC27A5Q9Y2P5 690 aa15.37■□□□□ 0.05
TPCN1-213ENST00000550543 STYXL1Q9Y6J8 313 aa15.37■□□□□ 0.05
TPCN1-213ENST00000550543 DMDP11532 3685 aa15.37■□□□□ 0.05
TPCN1-213ENST00000550543 SLC38A8A6NNN8 435 aa15.36■□□□□ 0.05
TPCN1-213ENST00000550543 VNN2O95498 520 aa15.36■□□□□ 0.05
TPCN1-213ENST00000550543 LDHAP00338 332 aaKnown RBP15.36■□□□□ 0.05
TPCN1-213ENST00000550543 PLCG1P19174 1290 aa15.36■□□□□ 0.05
TPCN1-213ENST00000550543 DDIT3P35638 169 aa15.36■□□□□ 0.05
TPCN1-213ENST00000550543 ATXN1P54253 815 aaKnown RBP15.36■□□□□ 0.05
TPCN1-213ENST00000550543 GRSF1Q12849 480 aaKnown RBP eCLIP15.36■□□□□ 0.05
TPCN1-213ENST00000550543 BFSP1Q12934 665 aa15.36■□□□□ 0.05
TPCN1-213ENST00000550543 CSRP2Q16527 193 aa15.36■□□□□ 0.05
TPCN1-213ENST00000550543 CC2D1AQ6P1N0 951 aaPredicted RBP15.36■□□□□ 0.05
TPCN1-213ENST00000550543 GAREM2Q75VX8 874 aa15.36■□□□□ 0.05
TPCN1-213ENST00000550543 CEP68Q76N32 757 aa15.36■□□□□ 0.05
TPCN1-213ENST00000550543 POMGNT1Q8WZA1 660 aa15.36■□□□□ 0.05
TPCN1-213ENST00000550543 LOXL4Q96JB6 756 aa15.36■□□□□ 0.05
TPCN1-213ENST00000550543 PYM1Q9BRP8 204 aaKnown RBP15.36■□□□□ 0.05
TPCN1-213ENST00000550543 ABCB6Q9NP58 842 aa15.36■□□□□ 0.05
TPCN1-213ENST00000550543 R3HCC1Q9Y3T6 440 aaKnown RBP15.36■□□□□ 0.05
TPCN1-213ENST00000550543 PCDHB5Q9Y5E4 795 aa15.36■□□□□ 0.05
TPCN1-213ENST00000550543 NCOR2Q9Y618 2525 aa15.36■□□□□ 0.05
TPCN1-213ENST00000550543 NFICP08651 508 aa15.35■□□□□ 0.05
TPCN1-213ENST00000550543 CSH1P0DML2 217 aa15.35■□□□□ 0.05
TPCN1-213ENST00000550543 CSH2P0DML3 217 aa15.35■□□□□ 0.05
TPCN1-213ENST00000550543 GUCY2FP51841 1108 aa15.35■□□□□ 0.05
TPCN1-213ENST00000550543 RPL10AP62906 217 aaKnown RBP15.35■□□□□ 0.05
TPCN1-213ENST00000550543 SATB1Q01826 763 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms