RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 ASTE1Q2TB18 679 aaPredicted RBP18.55■□□□□ 0.56
LETMD1-220ENST00000549686 PAN2Q504Q3 1202 aaKnown RBP18.55■□□□□ 0.56
LETMD1-220ENST00000549686 TIGD5Q53EQ6 642 aa18.55■□□□□ 0.56
LETMD1-220ENST00000549686 CD300LGQ6UXG3 332 aa18.55■□□□□ 0.56
LETMD1-220ENST00000549686 ZNF571Q7Z3V5 609 aaPredicted RBP18.55■□□□□ 0.56
LETMD1-220ENST00000549686 SLC47A2Q86VL8 602 aa18.55■□□□□ 0.56
LETMD1-220ENST00000549686 TXLNBQ8N3L3 684 aa18.55■□□□□ 0.56
LETMD1-220ENST00000549686 PDCL2Q8N4E4 241 aa18.55■□□□□ 0.56
LETMD1-220ENST00000549686 TMEM176AQ96HP8 235 aa18.55■□□□□ 0.56
LETMD1-220ENST00000549686 TNIP3Q96KP6 325 aa18.55■□□□□ 0.56
LETMD1-220ENST00000549686 MRPL45Q9BRJ2 306 aaKnown RBP18.55■□□□□ 0.56
LETMD1-220ENST00000549686 SYT11Q9BT88 431 aa18.55■□□□□ 0.56
LETMD1-220ENST00000549686 DNAJB4Q9UDY4 337 aa18.55■□□□□ 0.56
LETMD1-220ENST00000549686 NOCTQ9UK39 431 aaKnown RBP18.55■□□□□ 0.56
LETMD1-220ENST00000549686 SF3B1O75533 1304 aaKnown RBP eCLIP18.54■□□□□ 0.562e-7■■■■■ 99.9
LETMD1-220ENST00000549686 GABRDO14764 452 aa18.54■□□□□ 0.56
LETMD1-220ENST00000549686 SYN3O14994 580 aa18.54■□□□□ 0.56
LETMD1-220ENST00000549686 MED7O43513 233 aa18.54■□□□□ 0.56
LETMD1-220ENST00000549686 B4GALT3O60512 393 aa18.54■□□□□ 0.56
LETMD1-220ENST00000549686 LCA5LO95447 670 aa18.54■□□□□ 0.56
LETMD1-220ENST00000549686 TNFAIP3P21580 790 aa18.54■□□□□ 0.56
LETMD1-220ENST00000549686 GNL1P36915 607 aaPredicted RBP18.54■□□□□ 0.56
LETMD1-220ENST00000549686 SLC11A1P49279 550 aa18.54■□□□□ 0.56
LETMD1-220ENST00000549686 NDST1P52848 882 aa18.54■□□□□ 0.56
LETMD1-220ENST00000549686 RAD23BP54727 409 aa18.54■□□□□ 0.56
LETMD1-220ENST00000549686 BCAR1P56945 870 aa18.54■□□□□ 0.56
LETMD1-220ENST00000549686 STILQ15468 1287 aa18.54■□□□□ 0.56
LETMD1-220ENST00000549686 SPA17Q15506 151 aa18.54■□□□□ 0.56
LETMD1-220ENST00000549686 SLC18A3Q16572 532 aa18.54■□□□□ 0.56
LETMD1-220ENST00000549686 C10orf76Q5T2E6 689 aa18.54■□□□□ 0.56
LETMD1-220ENST00000549686 PPP1R2P3Q6NXS1 205 aa18.54■□□□□ 0.56
LETMD1-220ENST00000549686 RAD9BQ6WBX8 426 aa18.54■□□□□ 0.56
LETMD1-220ENST00000549686 TRIM72Q6ZMU5 477 aa18.54■□□□□ 0.56
LETMD1-220ENST00000549686 OR6B3Q8NGW1 331 aa18.54■□□□□ 0.56
LETMD1-220ENST00000549686 WHAMMQ8TF30 809 aa18.54■□□□□ 0.56
LETMD1-220ENST00000549686 KBTBD7Q8WVZ9 684 aa18.54■□□□□ 0.56
LETMD1-220ENST00000549686 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.54■□□□□ 0.56
LETMD1-220ENST00000549686 CWH43Q9H720 699 aa18.54■□□□□ 0.56
LETMD1-220ENST00000549686 AAASQ9NRG9 546 aa18.54■□□□□ 0.56
LETMD1-220ENST00000549686 CACNG4Q9UBN1 327 aa18.54■□□□□ 0.56
LETMD1-220ENST00000549686 STK39Q9UEW8 545 aa18.54■□□□□ 0.56
LETMD1-220ENST00000549686 ADAM28Q9UKQ2 775 aa18.54■□□□□ 0.56
LETMD1-220ENST00000549686 PRG3Q9Y2Y8 225 aaPredicted RBP18.54■□□□□ 0.56
LETMD1-220ENST00000549686 INSL6Q9Y581 213 aa18.54■□□□□ 0.56
LETMD1-220ENST00000549686 A8MXQ7 604 aa18.53■□□□□ 0.56
LETMD1-220ENST00000549686 PLEKP08567 350 aaPredicted RBP18.53■□□□□ 0.56
LETMD1-220ENST00000549686 VDRP11473 427 aa18.53■□□□□ 0.56
LETMD1-220ENST00000549686 PCSK1P29120 753 aa18.53■□□□□ 0.56
LETMD1-220ENST00000549686 RASIP1Q5U651 963 aa18.53■□□□□ 0.56
LETMD1-220ENST00000549686 WSCD1Q658N2 575 aa18.53■□□□□ 0.56
LETMD1-220ENST00000549686 NOP9Q86U38 636 aaKnown RBP18.53■□□□□ 0.56
LETMD1-220ENST00000549686 ZSCAN30Q86W11 494 aa18.53■□□□□ 0.56
LETMD1-220ENST00000549686 HERC6Q8IVU3 1022 aa18.53■□□□□ 0.56
LETMD1-220ENST00000549686 CRYBG2Q8N1P7 616 aa18.53■□□□□ 0.56
LETMD1-220ENST00000549686 SLC4A11Q8NBS3 891 aa18.53■□□□□ 0.56
LETMD1-220ENST00000549686 ZNF558Q96NG5 402 aa18.53■□□□□ 0.56
LETMD1-220ENST00000549686 RAD9AQ99638 391 aa18.53■□□□□ 0.56
LETMD1-220ENST00000549686 ZBED2Q9BTP6 218 aa18.53■□□□□ 0.56
LETMD1-220ENST00000549686 ELOVL4Q9GZR5 314 aa18.53■□□□□ 0.56
LETMD1-220ENST00000549686 STXBP5LQ9Y2K9 1186 aa18.53■□□□□ 0.56
LETMD1-220ENST00000549686 TDRD15B5MCY1 1934 aaKnown RBP18.53■□□□□ 0.56
LETMD1-220ENST00000549686 MKI67P46013 3256 aaKnown RBP18.52■□□□□ 0.56
LETMD1-220ENST00000549686 ZSCAN12O43309 604 aa18.52■□□□□ 0.56
LETMD1-220ENST00000549686 THAP12O43422 761 aa18.52■□□□□ 0.56
LETMD1-220ENST00000549686 CAPN15O75808 1086 aa18.52■□□□□ 0.56
LETMD1-220ENST00000549686 CCDC175P0C221 793 aa18.52■□□□□ 0.56
LETMD1-220ENST00000549686 ATP2A2P16615 1042 aaKnown RBP18.52■□□□□ 0.56
LETMD1-220ENST00000549686 BRCC3P46736 316 aa18.52■□□□□ 0.56
LETMD1-220ENST00000549686 ZNF394Q53GI3 561 aa18.52■□□□□ 0.56
LETMD1-220ENST00000549686 SPOUT1Q5T280 376 aaKnown RBP18.52■□□□□ 0.56
LETMD1-220ENST00000549686 FAM117BQ6P1L5 589 aa18.52■□□□□ 0.56
LETMD1-220ENST00000549686 THEM5Q8N1Q8 247 aa18.52■□□□□ 0.56
LETMD1-220ENST00000549686 DDX1Q92499 740 aaKnown RBP18.52■□□□□ 0.56
LETMD1-220ENST00000549686 RABGGTAQ92696 567 aa18.52■□□□□ 0.56
LETMD1-220ENST00000549686 OXCT2Q9BYC2 517 aaPredicted RBP18.52■□□□□ 0.56
LETMD1-220ENST00000549686 KCND1Q9NSA2 647 aa18.52■□□□□ 0.56
LETMD1-220ENST00000549686 CXXC1Q9P0U4 656 aaPredicted RBP18.52■□□□□ 0.56
LETMD1-220ENST00000549686 ADAMTS1Q9UHI8 967 aa18.52■□□□□ 0.56
LETMD1-220ENST00000549686 PUF60Q9UHX1 559 aaKnown RBP18.52■□□□□ 0.56
LETMD1-220ENST00000549686 SCN1AP35498 2009 aa18.52■□□□□ 0.55
LETMD1-220ENST00000549686 ATP8B3O60423 1300 aa18.51■□□□□ 0.55
LETMD1-220ENST00000549686 LSM8O95777 96 aaKnown RBP18.51■□□□□ 0.55
LETMD1-220ENST00000549686 GZMAP12544 262 aa18.51■□□□□ 0.55
LETMD1-220ENST00000549686 CD19P15391 556 aa18.51■□□□□ 0.55
LETMD1-220ENST00000549686 PPM1AP35813 382 aa18.51■□□□□ 0.55
LETMD1-220ENST00000549686 MTF1Q14872 753 aa18.51■□□□□ 0.55
LETMD1-220ENST00000549686 SGO2Q562F6 1265 aa18.51■□□□□ 0.55
LETMD1-220ENST00000549686 KCNT2Q6UVM3 1135 aa18.51■□□□□ 0.55
LETMD1-220ENST00000549686 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.51■□□□□ 0.55
LETMD1-220ENST00000549686 GPIHBP1Q8IV16 184 aa18.51■□□□□ 0.55
LETMD1-220ENST00000549686 SLC30A5Q8TAD4 765 aa18.51■□□□□ 0.55
LETMD1-220ENST00000549686 KIAA1524Q8TCG1 905 aa18.51■□□□□ 0.55
LETMD1-220ENST00000549686 HASPINQ8TF76 798 aa18.51■□□□□ 0.55
LETMD1-220ENST00000549686 SLC20A1Q8WUM9 679 aa18.51■□□□□ 0.55
LETMD1-220ENST00000549686 ZNF606Q8WXB4 792 aa18.51■□□□□ 0.55
LETMD1-220ENST00000549686 HEXIM2Q96MH2 286 aaKnown RBP18.51■□□□□ 0.55
LETMD1-220ENST00000549686 TWNKQ96RR1 684 aa18.51■□□□□ 0.55
LETMD1-220ENST00000549686 PDCL3Q9H2J4 239 aa18.51■□□□□ 0.55
LETMD1-220ENST00000549686 MARCH5Q9NX47 278 aa18.51■□□□□ 0.55
LETMD1-220ENST00000549686 CDH9Q9ULB4 789 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms