RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.75□□□□□ -0.53
LINC00661-204ENST00000549354 C1orf131Q8NDD1 294 aaKnown RBP11.75□□□□□ -0.53
LINC00661-204ENST00000549354 MICAL1Q8TDZ2 1067 aa11.75□□□□□ -0.53
LINC00661-204ENST00000549354 FAM167AQ96KS9 214 aa11.75□□□□□ -0.53
LINC00661-204ENST00000549354 RMDN2Q96LZ7 410 aa11.75□□□□□ -0.53
LINC00661-204ENST00000549354 SYT11Q9BT88 431 aa11.75□□□□□ -0.53
LINC00661-204ENST00000549354 KDM4CQ9H3R0 1056 aa11.75□□□□□ -0.53
LINC00661-204ENST00000549354 INTUQ9ULD6 942 aa11.75□□□□□ -0.53
LINC00661-204ENST00000549354 COQ4Q9Y3A0 265 aa11.75□□□□□ -0.53
LINC00661-204ENST00000549354 A0A0A6YYK5 440 aaPredicted RBP11.75□□□□□ -0.53
LINC00661-204ENST00000549354 LRRIQ4A6NIV6 560 aa11.75□□□□□ -0.53
LINC00661-204ENST00000549354 BTBD19C9JJ37 291 aa11.75□□□□□ -0.53
LINC00661-204ENST00000549354 MAFO75444 373 aaPredicted RBP11.75□□□□□ -0.53
LINC00661-204ENST00000549354 GTF2H1P32780 548 aa11.75□□□□□ -0.53
LINC00661-204ENST00000549354 STX2P32856 288 aa11.75□□□□□ -0.53
LINC00661-204ENST00000549354 COILP38432 576 aaPredicted RBP11.75□□□□□ -0.53
LINC00661-204ENST00000549354 LY6KQ17RY6 165 aa11.75□□□□□ -0.53
LINC00661-204ENST00000549354 BRI3BPQ8WY22 251 aa11.75□□□□□ -0.53
LINC00661-204ENST00000549354 TXLNGYQ9BZA5 131 aa11.75□□□□□ -0.53
LINC00661-204ENST00000549354 VPS37BQ9H9H4 285 aa11.75□□□□□ -0.53
LINC00661-204ENST00000549354 IGKV6-21A0A0C4DH24 114 aa11.74□□□□□ -0.53
LINC00661-204ENST00000549354 PDHXO00330 501 aa11.74□□□□□ -0.53
LINC00661-204ENST00000549354 ECEL1O95672 775 aa11.74□□□□□ -0.53
LINC00661-204ENST00000549354 PAEPP09466 180 aa11.74□□□□□ -0.53
LINC00661-204ENST00000549354 CYP2C8P10632 490 aa11.74□□□□□ -0.53
LINC00661-204ENST00000549354 KRT15P19012 456 aa11.74□□□□□ -0.53
LINC00661-204ENST00000549354 GLRA2P23416 452 aa11.74□□□□□ -0.53
LINC00661-204ENST00000549354 TCF7P36402 384 aaPredicted RBP11.74□□□□□ -0.53
LINC00661-204ENST00000549354 CLDN10P78369 228 aa11.74□□□□□ -0.53
LINC00661-204ENST00000549354 CCNA1P78396 465 aa11.74□□□□□ -0.53
LINC00661-204ENST00000549354 MIEF2Q96C03 454 aa11.74□□□□□ -0.53
LINC00661-204ENST00000549354 KREMEN1Q96MU8 473 aa11.74□□□□□ -0.53
LINC00661-204ENST00000549354 TMEM237Q96Q45 408 aa11.74□□□□□ -0.53
LINC00661-204ENST00000549354 TMEM134Q9H6X4 195 aa11.74□□□□□ -0.53
LINC00661-204ENST00000549354 DCTN4Q9UJW0 460 aa11.74□□□□□ -0.53
LINC00661-204ENST00000549354 MGRN1O60291 552 aa11.74□□□□□ -0.53
LINC00661-204ENST00000549354 SNX3O60493 162 aa11.74□□□□□ -0.53
LINC00661-204ENST00000549354 CHRNB2P17787 502 aa11.74□□□□□ -0.53
LINC00661-204ENST00000549354 CHRNA3P32297 505 aa11.74□□□□□ -0.53
LINC00661-204ENST00000549354 POLGP54098 1239 aaPredicted RBP11.74□□□□□ -0.53
LINC00661-204ENST00000549354 NOP14P78316 857 aaKnown RBP11.74□□□□□ -0.53
LINC00661-204ENST00000549354 ADCY2Q08462 1091 aa11.74□□□□□ -0.53
LINC00661-204ENST00000549354 SNRNP35Q16560 246 aaKnown RBP11.74□□□□□ -0.53
LINC00661-204ENST00000549354 RPAINQ86UA6 219 aa11.74□□□□□ -0.53
LINC00661-204ENST00000549354 ERICH1Q86X53 443 aa11.74□□□□□ -0.53
LINC00661-204ENST00000549354 SLC13A5Q86YT5 568 aaPredicted RBP11.74□□□□□ -0.53
LINC00661-204ENST00000549354 GLIS1Q8NBF1 620 aa11.74□□□□□ -0.53
LINC00661-204ENST00000549354 NETO2Q8NC67 525 aa11.74□□□□□ -0.53
LINC00661-204ENST00000549354 ASAP3Q8TDY4 903 aa11.74□□□□□ -0.53
LINC00661-204ENST00000549354 SEC14L1Q92503 715 aa11.74□□□□□ -0.53
LINC00661-204ENST00000549354 GBA2Q9HCG7 927 aaPredicted RBP11.74□□□□□ -0.53
LINC00661-204ENST00000549354 MTUS1Q9ULD2 1270 aa11.74□□□□□ -0.53
LINC00661-204ENST00000549354 MAGED2Q9UNF1 606 aaPredicted RBP11.74□□□□□ -0.53
LINC00661-204ENST00000549354 CLEC11AQ9Y240 323 aa11.74□□□□□ -0.53
LINC00661-204ENST00000549354 PLXNB2O15031 1838 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 STRNO43815 780 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 GAS2O43903 313 aaKnown RBP11.73□□□□□ -0.53
LINC00661-204ENST00000549354 RALAP11233 206 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 SLC26A2P50443 739 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 OVGP1Q12889 678 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 DHX34Q14147 1143 aaKnown RBP11.73□□□□□ -0.53
LINC00661-204ENST00000549354 ZBTB41Q5SVQ8 909 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 EXOC8Q8IYI6 725 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 FITM2Q8N6M3 262 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 PARD3BQ8TEW8 1205 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 PGM2Q96G03 612 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 TGS1Q96RS0 853 aaKnown RBP11.73□□□□□ -0.53
LINC00661-204ENST00000549354 SLCO1B3Q9NPD5 702 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 ZNF148Q9UQR1 794 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 ZBTB42B2RXF5 422 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 AGTP01019 485 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 MYCNP04198 464 aaPredicted RBP11.73□□□□□ -0.53
LINC00661-204ENST00000549354 NUDT17P0C025 328 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 CTNNA2P26232 953 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 SLC8A1P32418 973 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 PDE6CP51160 858 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 ITGA8P53708 1063 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 NCALDP61601 193 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 IRX4P78413 519 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 DNAJC3Q13217 504 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 NBPF20Q3BBV1 942 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 SPRYD7Q5W111 196 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 ZNF365Q70YC5 407 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 TAOK1Q7L7X3 1001 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 PIGWQ7Z7B1 504 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 FNBP1Q96RU3 617 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 KIAA1586Q9HCI6 787 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 USP15Q9Y4E8 981 aaPredicted RBP11.73□□□□□ -0.53
LINC00661-204ENST00000549354 MRPL42Q9Y6G3 142 aaKnown RBP11.73□□□□□ -0.53
LINC00661-204ENST00000549354 PLXNA1Q9UIW2 1896 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 ZNF236Q9UL36 1845 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 PASKQ96RG2 1323 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 CCL15-CCL14A0A0B4J2E2 113 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 FAM187AA6NFU0 413 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 CCL15Q16663 113 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 LACTB2Q53H82 288 aaPredicted RBP11.73□□□□□ -0.53
LINC00661-204ENST00000549354 MAMDC4Q6UXC1 1216 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 RHOT2Q8IXI1 618 aa11.73□□□□□ -0.53
LINC00661-204ENST00000549354 EIF1ADQ8N9N8 165 aaKnown RBP11.73□□□□□ -0.53
LINC00661-204ENST00000549354 SLC7A3Q8WY07 619 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms