RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-208ENST00000549205 CHP1Q99653 195 aa13.06□□□□□ -0.32
ERBB3-208ENST00000549205 MRPL45Q9BRJ2 306 aaKnown RBP13.06□□□□□ -0.32
ERBB3-208ENST00000549205 ZBED2Q9BTP6 218 aa13.06□□□□□ -0.32
ERBB3-208ENST00000549205 MARCH5Q9NX47 278 aa13.06□□□□□ -0.32
ERBB3-208ENST00000549205 ARHGAP20Q9P2F6 1191 aa13.06□□□□□ -0.32
ERBB3-208ENST00000549205 INSL6Q9Y581 213 aa13.06□□□□□ -0.32
ERBB3-208ENST00000549205 SSU72P8A0A1W2PR75 194 aa13.05□□□□□ -0.32
ERBB3-208ENST00000549205 CARNS1A5YM72 827 aa13.05□□□□□ -0.32
ERBB3-208ENST00000549205 I3L4J1 428 aa13.05□□□□□ -0.32
ERBB3-208ENST00000549205 TRAPPC3O43617 180 aa13.05□□□□□ -0.32
ERBB3-208ENST00000549205 CYP11A1P05108 521 aa13.05□□□□□ -0.32
ERBB3-208ENST00000549205 PLEKP08567 350 aaPredicted RBP13.05□□□□□ -0.32
ERBB3-208ENST00000549205 WARSP23381 471 aaKnown RBP13.05□□□□□ -0.32
ERBB3-208ENST00000549205 ANXA13P27216 316 aa13.05□□□□□ -0.32
ERBB3-208ENST00000549205 EIF4A3P38919 411 aaKnown RBP13.05□□□□□ -0.32
ERBB3-208ENST00000549205 BRCC3P46736 316 aa13.05□□□□□ -0.32
ERBB3-208ENST00000549205 NDST1P52848 882 aa13.05□□□□□ -0.32
ERBB3-208ENST00000549205 RAD23BP54727 409 aa13.05□□□□□ -0.32
ERBB3-208ENST00000549205 PTK2Q05397 1052 aa13.05□□□□□ -0.32
ERBB3-208ENST00000549205 C9orf50Q5SZB4 431 aa13.05□□□□□ -0.32
ERBB3-208ENST00000549205 WSCD1Q658N2 575 aa13.05□□□□□ -0.32
ERBB3-208ENST00000549205 SLC47A2Q86VL8 602 aa13.05□□□□□ -0.32
ERBB3-208ENST00000549205 UNC93AQ86WB7 457 aa13.05□□□□□ -0.32
ERBB3-208ENST00000549205 SPATA18Q8TC71 538 aa13.05□□□□□ -0.32
ERBB3-208ENST00000549205 TRIM44Q96DX7 344 aaPredicted RBP13.05□□□□□ -0.32
ERBB3-208ENST00000549205 SYT11Q9BT88 431 aa13.05□□□□□ -0.32
ERBB3-208ENST00000549205 ELOVL4Q9GZR5 314 aa13.05□□□□□ -0.32
ERBB3-208ENST00000549205 SNX25Q9H3E2 840 aa13.05□□□□□ -0.32
ERBB3-208ENST00000549205 HAUS4Q9H6D7 363 aa13.05□□□□□ -0.32
ERBB3-208ENST00000549205 HMGXB4Q9UGU5 601 aa13.05□□□□□ -0.32
ERBB3-208ENST00000549205 NOCTQ9UK39 431 aaKnown RBP13.05□□□□□ -0.32
ERBB3-208ENST00000549205 ADAM28Q9UKQ2 775 aa13.05□□□□□ -0.32
ERBB3-208ENST00000549205 DSEQ9UL01 958 aa13.05□□□□□ -0.32
ERBB3-208ENST00000549205 PCDHB8Q9UN66 801 aa13.05□□□□□ -0.32
ERBB3-208ENST00000549205 MRPL42Q9Y6G3 142 aaKnown RBP13.05□□□□□ -0.32
ERBB3-208ENST00000549205 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.05□□□□□ -0.32
ERBB3-208ENST00000549205 SOWAHDA6NJG2 315 aa13.04□□□□□ -0.32
ERBB3-208ENST00000549205 GABRDO14764 452 aa13.04□□□□□ -0.32
ERBB3-208ENST00000549205 ARHGAP6O43182 974 aa13.04□□□□□ -0.32
ERBB3-208ENST00000549205 TADA2AO75478 443 aa13.04□□□□□ -0.32
ERBB3-208ENST00000549205 PAEPP09466 180 aa13.04□□□□□ -0.32
ERBB3-208ENST00000549205 CYP11B1P15538 503 aa13.04□□□□□ -0.32
ERBB3-208ENST00000549205 LAG3P18627 525 aa13.04□□□□□ -0.32
ERBB3-208ENST00000549205 TYMPP19971 482 aa13.04□□□□□ -0.32
ERBB3-208ENST00000549205 GNL1P36915 607 aaPredicted RBP13.04□□□□□ -0.32
ERBB3-208ENST00000549205 PBX3P40426 434 aa13.04□□□□□ -0.32
ERBB3-208ENST00000549205 PDE6CP51160 858 aa13.04□□□□□ -0.32
ERBB3-208ENST00000549205 MAPK8IP2Q13387 824 aaPredicted RBP13.04□□□□□ -0.32
ERBB3-208ENST00000549205 SPOUT1Q5T280 376 aaKnown RBP13.04□□□□□ -0.32
ERBB3-208ENST00000549205 KCNT2Q6UVM3 1135 aa13.04□□□□□ -0.32
ERBB3-208ENST00000549205 ZNF571Q7Z3V5 609 aaPredicted RBP13.04□□□□□ -0.32
ERBB3-208ENST00000549205 NOP9Q86U38 636 aaKnown RBP13.04□□□□□ -0.32
ERBB3-208ENST00000549205 OSTM1Q86WC4 334 aa13.04□□□□□ -0.32
ERBB3-208ENST00000549205 CCDC170Q8IYT3 715 aa13.04□□□□□ -0.32
ERBB3-208ENST00000549205 FIBCD1Q8N539 461 aa13.04□□□□□ -0.32
ERBB3-208ENST00000549205 COLGALT1Q8NBJ5 622 aa13.04□□□□□ -0.32
ERBB3-208ENST00000549205 SLC4A11Q8NBS3 891 aa13.04□□□□□ -0.32
ERBB3-208ENST00000549205 OR6B3Q8NGW1 331 aa13.04□□□□□ -0.32
ERBB3-208ENST00000549205 SP7Q8TDD2 431 aaPredicted RBP13.04□□□□□ -0.32
ERBB3-208ENST00000549205 BCL7CQ8WUZ0 217 aaPredicted RBP13.04□□□□□ -0.32
ERBB3-208ENST00000549205 RNPC3Q96LT9 517 aaKnown RBP13.04□□□□□ -0.32
ERBB3-208ENST00000549205 ZNF558Q96NG5 402 aa13.04□□□□□ -0.32
ERBB3-208ENST00000549205 TWNKQ96RR1 684 aa13.04□□□□□ -0.32
ERBB3-208ENST00000549205 NT5C1AQ9BXI3 368 aa13.04□□□□□ -0.32
ERBB3-208ENST00000549205 NHEJ1Q9H9Q4 299 aaPredicted RBP13.04□□□□□ -0.32
ERBB3-208ENST00000549205 ACP6Q9NPH0 428 aa13.04□□□□□ -0.32
ERBB3-208ENST00000549205 NME7Q9Y5B8 376 aa13.04□□□□□ -0.32
ERBB3-208ENST00000549205 TIMM13Q9Y5L4 95 aaPredicted RBP13.04□□□□□ -0.32
ERBB3-208ENST00000549205 SF3B1O75533 1304 aaKnown RBP eCLIP13.04□□□□□ -0.32
ERBB3-208ENST00000549205 A8MXQ7 604 aa13.03□□□□□ -0.32
ERBB3-208ENST00000549205 NT5C1B-RDH14C9J2C7 533 aa13.03□□□□□ -0.32
ERBB3-208ENST00000549205 H0YGN5 161 aa13.03□□□□□ -0.32
ERBB3-208ENST00000549205 SYN3O14994 580 aa13.03□□□□□ -0.32
ERBB3-208ENST00000549205 TLL1O43897 1013 aa13.03□□□□□ -0.32
ERBB3-208ENST00000549205 CALCAP01258 141 aa13.03□□□□□ -0.32
ERBB3-208ENST00000549205 CHRNB2P17787 502 aa13.03□□□□□ -0.32
ERBB3-208ENST00000549205 GNA15P30679 374 aa13.03□□□□□ -0.32
ERBB3-208ENST00000549205 LHX1P48742 406 aa13.03□□□□□ -0.32
ERBB3-208ENST00000549205 ELAVL2Q12926 359 aaKnown RBP13.03□□□□□ -0.32
ERBB3-208ENST00000549205 SHHQ15465 462 aa13.03□□□□□ -0.32
ERBB3-208ENST00000549205 ASTE1Q2TB18 679 aaPredicted RBP13.03□□□□□ -0.32
ERBB3-208ENST00000549205 ZNF394Q53GI3 561 aa13.03□□□□□ -0.32
ERBB3-208ENST00000549205 FUT10Q6P4F1 479 aa13.03□□□□□ -0.32
ERBB3-208ENST00000549205 RAD9BQ6WBX8 426 aa13.03□□□□□ -0.32
ERBB3-208ENST00000549205 TMEM173Q86WV6 379 aaPredicted RBP13.03□□□□□ -0.32
ERBB3-208ENST00000549205 METTL23Q86XA0 190 aa13.03□□□□□ -0.32
ERBB3-208ENST00000549205 ZNF677Q86XU0 584 aa13.03□□□□□ -0.32
ERBB3-208ENST00000549205 SLC39A11Q8N1S5 342 aa13.03□□□□□ -0.32
ERBB3-208ENST00000549205 OLIG1Q8TAK6 271 aa13.03□□□□□ -0.32
ERBB3-208ENST00000549205 SLC20A1Q8WUM9 679 aa13.03□□□□□ -0.32
ERBB3-208ENST00000549205 DDX1Q92499 740 aaKnown RBP13.03□□□□□ -0.32
ERBB3-208ENST00000549205 CLP1Q92989 425 aaKnown RBP13.03□□□□□ -0.32
ERBB3-208ENST00000549205 TMEM176AQ96HP8 235 aa13.03□□□□□ -0.32
ERBB3-208ENST00000549205 IGSF21Q96ID5 467 aa13.03□□□□□ -0.32
ERBB3-208ENST00000549205 CCDC42Q96M95 316 aa13.03□□□□□ -0.32
ERBB3-208ENST00000549205 AGPAT1Q99943 283 aa13.03□□□□□ -0.32
ERBB3-208ENST00000549205 GDF15Q99988 308 aa13.03□□□□□ -0.32
ERBB3-208ENST00000549205 GPR62Q9BZJ7 368 aa13.03□□□□□ -0.32
ERBB3-208ENST00000549205 DNAI2Q9GZS0 605 aa13.03□□□□□ -0.32
ERBB3-208ENST00000549205 DEF6Q9H4E7 631 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms