RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 TRIM67Q6ZTA4 783 aa16.97■□□□□ 0.31
DDX54-205ENST00000548786 TRAPPC11Q7Z392 1133 aa16.97■□□□□ 0.31
DDX54-205ENST00000548786 HS6ST3Q8IZP7 471 aa16.97■□□□□ 0.31
DDX54-205ENST00000548786 LRRC52Q8N7C0 313 aa16.97■□□□□ 0.31
DDX54-205ENST00000548786 ZNF516Q92618 1163 aa16.97■□□□□ 0.31
DDX54-205ENST00000548786 ELMO3Q96BJ8 720 aa16.97■□□□□ 0.31
DDX54-205ENST00000548786 SEPT5Q99719 369 aaPredicted RBP16.97■□□□□ 0.31
DDX54-205ENST00000548786 KCNK12Q9HB15 430 aa16.97■□□□□ 0.31
DDX54-205ENST00000548786 CHMP5Q9NZZ3 219 aa16.97■□□□□ 0.31
DDX54-205ENST00000548786 SORCS3Q9UPU3 1222 aa16.97■□□□□ 0.31
DDX54-205ENST00000548786 TMEM221A6NGB7 291 aa16.96■□□□□ 0.31
DDX54-205ENST00000548786 LRRIQ3A6PVS8 624 aaPredicted RBP16.96■□□□□ 0.31
DDX54-205ENST00000548786 M0R296 226 aa16.96■□□□□ 0.31
DDX54-205ENST00000548786 CALUO43852 315 aaPredicted RBP16.96■□□□□ 0.31
DDX54-205ENST00000548786 GPR37L1O60883 481 aa16.96■□□□□ 0.31
DDX54-205ENST00000548786 CEBPBP17676 345 aa16.96■□□□□ 0.31
DDX54-205ENST00000548786 DLG4P78352 724 aa16.96■□□□□ 0.31
DDX54-205ENST00000548786 MYO1EQ12965 1108 aa16.96■□□□□ 0.31
DDX54-205ENST00000548786 BIRC3Q13489 604 aa16.96■□□□□ 0.31
DDX54-205ENST00000548786 CCDC142Q17RM4 750 aa16.96■□□□□ 0.31
DDX54-205ENST00000548786 HFE2Q6ZVN8 426 aa16.96■□□□□ 0.31
DDX54-205ENST00000548786 OSTM1Q86WC4 334 aa16.96■□□□□ 0.31
DDX54-205ENST00000548786 ADGRF2Q8IZF7 708 aa16.96■□□□□ 0.31
DDX54-205ENST00000548786 ELMOD1Q8N336 334 aa16.96■□□□□ 0.31
DDX54-205ENST00000548786 FGF13Q92913 245 aa16.96■□□□□ 0.31
DDX54-205ENST00000548786 TCEAL4Q96EI5 215 aa16.96■□□□□ 0.31
DDX54-205ENST00000548786 EEF2KMTQ96G04 330 aa16.96■□□□□ 0.31
DDX54-205ENST00000548786 MFSD14AQ96MC6 490 aa16.96■□□□□ 0.31
DDX54-205ENST00000548786 MMS19Q96T76 1030 aa16.96■□□□□ 0.31
DDX54-205ENST00000548786 OXCT2Q9BYC2 517 aaPredicted RBP16.96■□□□□ 0.31
DDX54-205ENST00000548786 ZCWPW1Q9H0M4 648 aa16.96■□□□□ 0.31
DDX54-205ENST00000548786 DMAC2Q9NW81 257 aa16.96■□□□□ 0.31
DDX54-205ENST00000548786 DDX43Q9NXZ2 648 aaKnown RBP16.96■□□□□ 0.31
DDX54-205ENST00000548786 ABI2Q9NYB9 513 aaPredicted RBP16.96■□□□□ 0.31
DDX54-205ENST00000548786 CEP72Q9P209 647 aa16.96■□□□□ 0.31
DDX54-205ENST00000548786 MRPS23Q9Y3D9 190 aaKnown RBP16.96■□□□□ 0.31
DDX54-205ENST00000548786 DOCK8Q8NF50 2099 aa16.96■□□□□ 0.31
DDX54-205ENST00000548786 TECTAO75443 2155 aa16.95■□□□□ 0.3
DDX54-205ENST00000548786 NRG2O14511 850 aaPredicted RBP16.95■□□□□ 0.3
DDX54-205ENST00000548786 KINO60870 393 aaKnown RBP16.95■□□□□ 0.3
DDX54-205ENST00000548786 PHACTR2O75167 634 aa16.95■□□□□ 0.3
DDX54-205ENST00000548786 PRPF40AO75400 957 aaKnown RBP16.95■□□□□ 0.3
DDX54-205ENST00000548786 KIF20AO95235 890 aa16.95■□□□□ 0.3
DDX54-205ENST00000548786 CST3P01034 146 aaPredicted RBP16.95■□□□□ 0.3
DDX54-205ENST00000548786 MYL4P12829 197 aa16.95■□□□□ 0.3
DDX54-205ENST00000548786 LAMP2P13473 410 aa16.95■□□□□ 0.3
DDX54-205ENST00000548786 PTPN2P17706 415 aa16.95■□□□□ 0.3
DDX54-205ENST00000548786 NR2F2P24468 414 aa16.95■□□□□ 0.3
DDX54-205ENST00000548786 TRPC3Q13507 836 aa16.95■□□□□ 0.3
DDX54-205ENST00000548786 CENPPQ6IPU0 288 aa16.95■□□□□ 0.3
DDX54-205ENST00000548786 LRRTM3Q86VH5 581 aa16.95■□□□□ 0.3
DDX54-205ENST00000548786 GUF1Q8N442 669 aaKnown RBP16.95■□□□□ 0.3
DDX54-205ENST00000548786 SMARCE1Q969G3 411 aa16.95■□□□□ 0.3
DDX54-205ENST00000548786 MCRS1Q96EZ8 462 aa16.95■□□□□ 0.3
DDX54-205ENST00000548786 TMLHEQ9NVH6 421 aa16.95■□□□□ 0.3
DDX54-205ENST00000548786 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.95■□□□□ 0.3
DDX54-205ENST00000548786 EPS15L1Q9UBC2 864 aa16.95■□□□□ 0.3
DDX54-205ENST00000548786 CDH7Q9ULB5 785 aa16.95■□□□□ 0.3
DDX54-205ENST00000548786 FRMD4BQ9Y2L6 1034 aa16.95■□□□□ 0.3
DDX54-205ENST00000548786 PCDHA5Q9Y5H7 936 aa16.95■□□□□ 0.3
DDX54-205ENST00000548786 NOTCH4Q99466 2003 aa16.94■□□□□ 0.3
DDX54-205ENST00000548786 PRR33A8MZF0 331 aa16.94■□□□□ 0.3
DDX54-205ENST00000548786 NARSO43776 548 aaKnown RBP16.94■□□□□ 0.3
DDX54-205ENST00000548786 SMC2O95347 1197 aa16.94■□□□□ 0.3
DDX54-205ENST00000548786 POU2F2P09086 479 aa16.94■□□□□ 0.3
DDX54-205ENST00000548786 GJA1P17302 382 aa16.94■□□□□ 0.3
DDX54-205ENST00000548786 COL9A1P20849 921 aa16.94■□□□□ 0.3
DDX54-205ENST00000548786 CCR2P41597 374 aa16.94■□□□□ 0.3
DDX54-205ENST00000548786 ALDH1A3P47895 512 aa16.94■□□□□ 0.3
DDX54-205ENST00000548786 MYL6P60660 151 aa16.94■□□□□ 0.3
DDX54-205ENST00000548786 TSPY1Q01534 308 aa16.94■□□□□ 0.3
DDX54-205ENST00000548786 SOWAHAQ2M3V2 549 aa16.94■□□□□ 0.3
DDX54-205ENST00000548786 MGAT5BQ3V5L5 792 aa16.94■□□□□ 0.3
DDX54-205ENST00000548786 TDRD10Q5VZ19 366 aaKnown RBP16.94■□□□□ 0.3
DDX54-205ENST00000548786 IQCEQ6IPM2 695 aa16.94■□□□□ 0.3
DDX54-205ENST00000548786 PDZD4Q76G19 769 aaPredicted RBP16.94■□□□□ 0.3
DDX54-205ENST00000548786 RTL10Q7L3V2 364 aa16.94■□□□□ 0.3
DDX54-205ENST00000548786 SLC9A9Q8IVB4 645 aa16.94■□□□□ 0.3
DDX54-205ENST00000548786 NPAS3Q8IXF0 933 aa16.94■□□□□ 0.3
DDX54-205ENST00000548786 FAM200AQ8TCP9 573 aa16.94■□□□□ 0.3
DDX54-205ENST00000548786 GPR152Q8TDT2 470 aa16.94■□□□□ 0.3
DDX54-205ENST00000548786 PARD3BQ8TEW8 1205 aa16.94■□□□□ 0.3
DDX54-205ENST00000548786 ZNF512Q96ME7 567 aaPredicted RBP16.94■□□□□ 0.3
DDX54-205ENST00000548786 LPIN3Q9BQK8 851 aa16.94■□□□□ 0.3
DDX54-205ENST00000548786 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.94■□□□□ 0.3
DDX54-205ENST00000548786 RMND1Q9NWS8 449 aa16.94■□□□□ 0.3
DDX54-205ENST00000548786 GDAP2Q9NXN4 497 aa16.94■□□□□ 0.3
DDX54-205ENST00000548786 NUMBLQ9Y6R0 609 aa16.94■□□□□ 0.3
DDX54-205ENST00000548786 PDGFBP01127 241 aaPredicted RBP16.93■□□□□ 0.3
DDX54-205ENST00000548786 PRCPP42785 496 aa16.93■□□□□ 0.3
DDX54-205ENST00000548786 EPHB3P54753 998 aa16.93■□□□□ 0.3
DDX54-205ENST00000548786 PSMC1P62191 440 aaKnown RBP16.93■□□□□ 0.3
DDX54-205ENST00000548786 MYL7Q01449 175 aa16.93■□□□□ 0.3
DDX54-205ENST00000548786 SIGLEC14Q08ET2 396 aa16.93■□□□□ 0.3
DDX54-205ENST00000548786 TDGQ13569 410 aa16.93■□□□□ 0.3
DDX54-205ENST00000548786 PARM1Q6UWI2 310 aa16.93■□□□□ 0.3
DDX54-205ENST00000548786 SCARA5Q6ZMJ2 495 aa16.93■□□□□ 0.3
DDX54-205ENST00000548786 DCP1BQ8IZD4 617 aaKnown RBP16.93■□□□□ 0.3
DDX54-205ENST00000548786 TOP6BLQ8N6T0 577 aa16.93■□□□□ 0.3
DDX54-205ENST00000548786 STKLD1Q8NE28 680 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms