RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 SCNN1GP51170 649 aa5□□□□□ -1.61
PTCH1-216ENST00000548379 JAG1P78504 1218 aa5□□□□□ -1.61
PTCH1-216ENST00000548379 HHEXQ03014 270 aa5□□□□□ -1.61
PTCH1-216ENST00000548379 ICAM4Q14773 271 aa5□□□□□ -1.61
PTCH1-216ENST00000548379 FAM83BQ5T0W9 1011 aa5□□□□□ -1.61
PTCH1-216ENST00000548379 LMBRD2Q68DH5 695 aaPredicted RBP5□□□□□ -1.61
PTCH1-216ENST00000548379 Q6ZRM9 215 aa5□□□□□ -1.61
PTCH1-216ENST00000548379 TMPRSS9Q7Z410 1059 aa5□□□□□ -1.61
PTCH1-216ENST00000548379 SLC17A8Q8NDX2 589 aa5□□□□□ -1.61
PTCH1-216ENST00000548379 CNPPD1Q9BV87 410 aa5□□□□□ -1.61
PTCH1-216ENST00000548379 SELENOOQ9BVL4 669 aa5□□□□□ -1.61
PTCH1-216ENST00000548379 TLR10Q9BXR5 811 aa5□□□□□ -1.61
PTCH1-216ENST00000548379 WDR12Q9GZL7 423 aaKnown RBP5□□□□□ -1.61
PTCH1-216ENST00000548379 SIK2Q9H0K1 926 aa5□□□□□ -1.61
PTCH1-216ENST00000548379 MYH16Q9H6N6 1097 aa5□□□□□ -1.61
PTCH1-216ENST00000548379 SACM1LQ9NTJ5 587 aa5□□□□□ -1.61
PTCH1-216ENST00000548379 MRPS18AQ9NVS2 196 aaKnown RBP5□□□□□ -1.61
PTCH1-216ENST00000548379 GPRC5BQ9NZH0 403 aa5□□□□□ -1.61
PTCH1-216ENST00000548379 MYO1AQ9UBC5 1043 aa5□□□□□ -1.61
PTCH1-216ENST00000548379 CHST2Q9Y4C5 530 aa5□□□□□ -1.61
PTCH1-216ENST00000548379 FGD5Q6ZNL6 1462 aa5□□□□□ -1.61
PTCH1-216ENST00000548379 XDHP47989 1333 aa4.99□□□□□ -1.61
PTCH1-216ENST00000548379 CCDC78A2IDD5 438 aa4.99□□□□□ -1.61
PTCH1-216ENST00000548379 GOLGA6L6A8MZA4 724 aa4.99□□□□□ -1.61
PTCH1-216ENST00000548379 DIRC3C9JPN6 131 aa4.99□□□□□ -1.61
PTCH1-216ENST00000548379 CYP27B1O15528 508 aa4.99□□□□□ -1.61
PTCH1-216ENST00000548379 GRPP07492 148 aa4.99□□□□□ -1.61
PTCH1-216ENST00000548379 PARP1P09874 1014 aaKnown RBP4.99□□□□□ -1.61
PTCH1-216ENST00000548379 ACO1P21399 889 aaKnown RBP4.99□□□□□ -1.61
PTCH1-216ENST00000548379 IL6STP40189 918 aaPredicted RBP4.99□□□□□ -1.61
PTCH1-216ENST00000548379 UCP3P55916 312 aa4.99□□□□□ -1.61
PTCH1-216ENST00000548379 WNT3P56703 355 aa4.99□□□□□ -1.61
PTCH1-216ENST00000548379 MXRA7P84157 204 aa4.99□□□□□ -1.61
PTCH1-216ENST00000548379 NHLH2Q02577 135 aa4.99□□□□□ -1.61
PTCH1-216ENST00000548379 RAB32Q13637 225 aa4.99□□□□□ -1.61
PTCH1-216ENST00000548379 GORABQ5T7V8 394 aa4.99□□□□□ -1.61
PTCH1-216ENST00000548379 FAM160B1Q5W0V3 765 aa4.99□□□□□ -1.61
PTCH1-216ENST00000548379 HIBCHQ6NVY1 386 aaPredicted RBP4.99□□□□□ -1.61
PTCH1-216ENST00000548379 ERAP2Q6P179 960 aa4.99□□□□□ -1.61
PTCH1-216ENST00000548379 SGMS1Q86VZ5 419 aa4.99□□□□□ -1.61
PTCH1-216ENST00000548379 GSPT2Q8IYD1 628 aaKnown RBP4.99□□□□□ -1.61
PTCH1-216ENST00000548379 CFAP52Q8N1V2 620 aa4.99□□□□□ -1.61
PTCH1-216ENST00000548379 ENAHQ8N8S7 591 aaPredicted RBP4.99□□□□□ -1.61
PTCH1-216ENST00000548379 Q8NA96 180 aa4.99□□□□□ -1.61
PTCH1-216ENST00000548379 ATP11CQ8NB49 1132 aa4.99□□□□□ -1.61
PTCH1-216ENST00000548379 ACRBPQ8NEB7 543 aa4.99□□□□□ -1.61
PTCH1-216ENST00000548379 OR56A3Q8NH54 315 aa4.99□□□□□ -1.61
PTCH1-216ENST00000548379 KIAA1191Q96A73 305 aa4.99□□□□□ -1.61
PTCH1-216ENST00000548379 FAM89AQ96GI7 184 aa4.99□□□□□ -1.61
PTCH1-216ENST00000548379 LRIG1Q96JA1 1093 aa4.99□□□□□ -1.61
PTCH1-216ENST00000548379 GDF15Q99988 308 aa4.99□□□□□ -1.61
PTCH1-216ENST00000548379 GPR87Q9BY21 358 aa4.99□□□□□ -1.61
PTCH1-216ENST00000548379 IMPG2Q9BZV3 1241 aa4.99□□□□□ -1.61
PTCH1-216ENST00000548379 A1CFQ9NQ94 594 aaKnown RBP4.99□□□□□ -1.61
PTCH1-216ENST00000548379 HESX1Q9UBX0 185 aa4.99□□□□□ -1.61
PTCH1-216ENST00000548379 TARBP1Q13395 1621 aaKnown RBP4.98□□□□□ -1.61
PTCH1-216ENST00000548379 CLCA1A8K7I4 914 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 PYCARD-AS1I3L0S3 204 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 M0QYG6 137 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 APOL1O14791 398 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 TRIM24O15164 1050 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 KIF20AO95235 890 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 MT-ND5P03915 603 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 ANXA2P07355 339 aaKnown RBP4.98□□□□□ -1.61
PTCH1-216ENST00000548379 HOXA5P20719 270 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 FGFR2P21802 821 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 KLRC1P26715 233 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 APOBEC3AP31941 199 aaPredicted RBP4.98□□□□□ -1.61
PTCH1-216ENST00000548379 PPM1AP35813 382 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 VIPR2P41587 438 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 MAN2A2P49641 1150 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 PMS2P11Q13670 270 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 BOP1Q14137 746 aaKnown RBP4.98□□□□□ -1.61
PTCH1-216ENST00000548379 SLC44A4Q53GD3 710 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 DCAF12L1Q5VU92 463 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 LRRC55Q6ZSA7 311 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 CERS3Q8IU89 383 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 KRTAP19-1Q8IUB9 90 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 LIX1LQ8IVB5 337 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 DNAJC5GQ8N7S2 189 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 PCSK9Q8NBP7 692 aaKnown RBP4.98□□□□□ -1.61
PTCH1-216ENST00000548379 OR56A1Q8NGH5 318 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 POC1BQ8TC44 478 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 MARS2Q96GW9 593 aaKnown RBP4.98□□□□□ -1.61
PTCH1-216ENST00000548379 SNX22Q96L94 193 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 DCLRE1CQ96SD1 692 aaKnown RBP4.98□□□□□ -1.61
PTCH1-216ENST00000548379 MESP1Q9BRJ9 268 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 CHST8Q9H2A9 424 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 CERS4Q9HA82 394 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 PTPRHQ9HD43 1115 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 SERHLQ9NQF3 203 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 CTTNBP2NLQ9P2B4 639 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 HSFX1Q9UBD0 423 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 XPR1Q9UBH6 696 aa4.98□□□□□ -1.61
PTCH1-216ENST00000548379 CNOT11Q9UKZ1 510 aaKnown RBP4.98□□□□□ -1.61
PTCH1-216ENST00000548379 CLASP1Q7Z460 1538 aa4.97□□□□□ -1.61
PTCH1-216ENST00000548379 WDR97A6NE52 1622 aa4.97□□□□□ -1.61
PTCH1-216ENST00000548379 TMEM233B4DJY2 109 aa4.97□□□□□ -1.61
PTCH1-216ENST00000548379 E7ENX8 843 aa4.97□□□□□ -1.61
PTCH1-216ENST00000548379 AREL1O15033 823 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms