RNA–Protein interactions for RNA: ENST00000548092.5

TRAFD1-204, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-204ENST00000548092 TMEM200BQ69YZ2 307 aa4.93□□□□□ -1.62
TRAFD1-204ENST00000548092 IGFL4Q6B9Z1 124 aa4.93□□□□□ -1.62
TRAFD1-204ENST00000548092 PSRC1Q6PGN9 363 aaPredicted RBP4.93□□□□□ -1.62
TRAFD1-204ENST00000548092 CCDC174Q6PII3 467 aa4.93□□□□□ -1.62
TRAFD1-204ENST00000548092 USP30Q70CQ3 517 aa4.93□□□□□ -1.62
TRAFD1-204ENST00000548092 SOCS4Q8WXH5 440 aa4.93□□□□□ -1.62
TRAFD1-204ENST00000548092 EDAQ92838 391 aa4.93□□□□□ -1.62
TRAFD1-204ENST00000548092 EXTL1Q92935 676 aa4.93□□□□□ -1.62
TRAFD1-204ENST00000548092 MKL1Q969V6 931 aa4.93□□□□□ -1.62
TRAFD1-204ENST00000548092 CLUHP3Q96NS8 147 aa4.93□□□□□ -1.62
TRAFD1-204ENST00000548092 PLA2G12BQ9BX93 195 aa4.93□□□□□ -1.62
TRAFD1-204ENST00000548092 RWDD1Q9H446 243 aaPredicted RBP4.93□□□□□ -1.62
TRAFD1-204ENST00000548092 KCNH7Q9NS40 1196 aa4.93□□□□□ -1.62
TRAFD1-204ENST00000548092 DDX20Q9UHI6 824 aaKnown RBP4.93□□□□□ -1.62
TRAFD1-204ENST00000548092 NR2E1Q9Y466 385 aa4.93□□□□□ -1.62
TRAFD1-204ENST00000548092 HS3ST3A1Q9Y663 406 aa4.93□□□□□ -1.62
TRAFD1-204ENST00000548092 PTPRFP10586 1907 aa4.93□□□□□ -1.62
TRAFD1-204ENST00000548092 KIF16BQ96L93 1317 aa4.93□□□□□ -1.62
TRAFD1-204ENST00000548092 COL4A4P53420 1690 aaPredicted RBP4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 A0A0G2JNJ9 132 aa4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 SLC12A8A0AV02 714 aa4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 TCP10L2B9ZVM9 353 aa4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 KBTBD13C9JR72 458 aa4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 FOXP2O15409 715 aa4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 MYOGP15173 224 aa4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 ACO1P21399 889 aaKnown RBP4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 KCNA5P22460 613 aa4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 SDHAP31040 664 aa4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 RARSP54136 660 aaKnown RBP4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 HMGN5P82970 282 aaKnown RBP4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 SLC20A2Q08357 652 aa4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 FOXL1Q12952 345 aa4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 PRKD1Q15139 912 aaPredicted RBP4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 CCL14Q16627 93 aa4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 HSP90AB3PQ58FF7 597 aa4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 EPHA10Q5JZY3 1008 aa4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 CC2D1BQ5T0F9 858 aaKnown RBP4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 MAMDC4Q6UXC1 1216 aa4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 OTOP2Q7RTS6 562 aa4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 GPR135Q8IZ08 494 aa4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 IPO4Q8TEX9 1081 aaKnown RBP4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 THAP3Q8WTV1 239 aaPredicted RBP4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 ANP32BQ92688 251 aaKnown RBP4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 USP6NLQ92738 828 aa4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 FOXRED1Q96CU9 486 aaPredicted RBP4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 OR14A2Q96R54 314 aa4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 C12orf65Q9H3J6 166 aaKnown RBP4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 AGO3Q9H9G7 860 aaKnown RBP4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 Q9UFV3 132 aa4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 SFMBT1Q9UHJ3 866 aa4.92□□□□□ -1.62
TRAFD1-204ENST00000548092 FREM2Q5SZK8 3169 aa4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 DVL2O14641 736 aa4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 LPXNO60711 386 aa4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 BAG4O95429 457 aaKnown RBP4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 CT47B1P0C2W7 299 aaPredicted RBP4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 GDF5P43026 501 aa4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 MECP2P51608 486 aaKnown RBP4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 RABGGTBP53611 331 aa4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 DGCR2P98153 550 aa4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 FOXE3Q13461 319 aa4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 CNGB1Q14028 1251 aaPredicted RBP4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 ZNF568Q3ZCX4 644 aa4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 USP39Q53GS9 565 aaKnown RBP4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 TMEM177Q53S58 311 aa4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 MFSD5Q6N075 450 aa4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 GADL1Q6ZQY3 521 aa4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 ZNF365Q70YC5 407 aa4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 FASTKD5Q7L8L6 764 aaKnown RBP4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 RTN4RL1Q86UN2 441 aaPredicted RBP4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 ADHFE1Q8IWW8 467 aa4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 SLC44A5Q8NCS7 719 aa4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 HIPK4Q8NE63 616 aa4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 ZSWIM2Q8NEG5 633 aa4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 ERCC4Q92889 916 aaPredicted RBP4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 ZNF503Q96F45 646 aa4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 MRPL4Q9BYD3 311 aaKnown RBP4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 ZNF341Q9BYN7 854 aa4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 UPF3BQ9BZI7 483 aaKnown RBP4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 TDRD3Q9H7E2 651 aaKnown RBP4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 NCOA5Q9HCD5 579 aaKnown RBP4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 TMEM51Q9NW97 253 aa4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 MAGEL2Q9UJ55 1249 aa4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 FBXO10Q9UK96 956 aa4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 ZHX1Q9UKY1 873 aaPredicted RBP4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 TBX21Q9UL17 535 aa4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 ASB1Q9Y576 335 aa4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 SLC30A1Q9Y6M5 507 aa4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 UTYO14607 1347 aa4.91□□□□□ -1.62
TRAFD1-204ENST00000548092 CCDC163A0A0D9SF12 145 aa4.9□□□□□ -1.63
TRAFD1-204ENST00000548092 PQBP1O60828 265 aaKnown RBP4.9□□□□□ -1.63
TRAFD1-204ENST00000548092 FZD7O75084 574 aa4.9□□□□□ -1.63
TRAFD1-204ENST00000548092 TIMP1P01033 207 aa4.9□□□□□ -1.63
TRAFD1-204ENST00000548092 KLRK1P26718 216 aa4.9□□□□□ -1.63
TRAFD1-204ENST00000548092 AVPR2P30518 371 aa4.9□□□□□ -1.63
TRAFD1-204ENST00000548092 ADCYAP1R1P41586 468 aa4.9□□□□□ -1.63
TRAFD1-204ENST00000548092 RBM5P52756 815 aaKnown RBP eCLIP4.9□□□□□ -1.63
TRAFD1-204ENST00000548092 IRF9Q00978 393 aa4.9□□□□□ -1.63
TRAFD1-204ENST00000548092 HGFACQ04756 655 aa4.9□□□□□ -1.63
TRAFD1-204ENST00000548092 KLF10Q13118 480 aa4.9□□□□□ -1.63
TRAFD1-204ENST00000548092 MVPQ14764 893 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms