RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 ZBED4O75132 1171 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 CIB2O75838 187 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 VIL1P09327 827 aaKnown RBP11.28□□□□□ -0.6
NPAS3-205ENST00000547068 SPATA31C1P0DKV0 1188 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 RPA1P27694 616 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 CPA2P48052 419 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 CXCL9Q07325 125 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 P3H1Q32P28 736 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 RSBN1LQ6PCB5 846 aaPredicted RBP11.28□□□□□ -0.6
NPAS3-205ENST00000547068 HERPUD2Q9BSE4 406 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 PHACTR1Q9C0D0 580 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 MANSC1Q9H8J5 431 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 TMEM165Q9HC07 324 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 OLFML3Q9NRN5 406 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 UVRAGQ9P2Y5 699 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 CHMP2BQ9UQN3 213 aa11.28□□□□□ -0.6
NPAS3-205ENST00000547068 B2RBV5 119 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 FZD9O00144 591 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 EIF3DO15371 548 aaKnown RBP eCLIP11.27□□□□□ -0.61
NPAS3-205ENST00000547068 PPP1R11O60927 126 aaPredicted RBP11.27□□□□□ -0.61
NPAS3-205ENST00000547068 SGPL1O95470 568 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 MAP3K10Q02779 954 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 TTLL12Q14166 644 aaPredicted RBP11.27□□□□□ -0.61
NPAS3-205ENST00000547068 ASPRV1Q53RT3 343 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 OLFML2BQ68BL8 750 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 RIPOR1Q6ZS17 1223 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 C16orf86Q6ZW13 317 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 GSTA5Q7RTV2 222 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 NET1Q7Z628 596 aaPredicted RBP11.27□□□□□ -0.61
NPAS3-205ENST00000547068 ANKS1BQ7Z6G8 1248 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 SATL1Q86VE3 508 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 ARHGEF19Q8IW93 802 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 MYCT1Q8N699 235 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 RDH13Q8NBN7 331 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 LMO3Q8TAP4 145 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 SPIRE2Q8WWL2 714 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 FAM118BQ9BPY3 351 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 TSSK1BQ9BXA7 367 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 FOXP3Q9BZS1 431 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 CLIC5Q9NZA1 410 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 RNF181Q9P0P0 153 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 HSFX1Q9UBD0 423 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 GTF3C4Q9UKN8 822 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 NEU2Q9Y3R4 380 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 SCN9AQ15858 1988 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 MAST2Q6P0Q8 1798 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 SMIM31A0A1B0GVY4 71 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 H3BRJ5 948 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 PIK3CDO00329 1044 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 USP1O94782 785 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 HARSP12081 509 aaKnown RBP11.27□□□□□ -0.61
NPAS3-205ENST00000547068 PRELPP51888 382 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 CYP4A11Q02928 519 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 CENPCQ03188 943 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 MED21Q13503 144 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 NFIL3Q16649 462 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 TRMT5Q32P41 509 aaKnown RBP11.27□□□□□ -0.61
NPAS3-205ENST00000547068 TTC7BQ86TV6 843 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 NOP9Q86U38 636 aaKnown RBP11.27□□□□□ -0.61
NPAS3-205ENST00000547068 RASSF3Q86WH2 238 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 LRRC6Q86X45 466 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 TMPRSS6Q8IU80 811 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 SCUBE1Q8IWY4 988 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 OGFOD1Q8N543 542 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 CERS5Q8N5B7 392 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 HEMGNQ9BXL5 484 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 JMJD4Q9H9V9 463 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 ARMCX1Q9P291 453 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 PSMC3IPQ9P2W1 217 aaPredicted RBP11.27□□□□□ -0.61
NPAS3-205ENST00000547068 DNAJB4Q9UDY4 337 aa11.27□□□□□ -0.61
NPAS3-205ENST00000547068 FAM13AO94988 1023 aa11.26□□□□□ -0.61
NPAS3-205ENST00000547068 GAP43P17677 238 aa11.26□□□□□ -0.61
NPAS3-205ENST00000547068 GRIA2P42262 883 aa11.26□□□□□ -0.61
NPAS3-205ENST00000547068 SPIRE1Q08AE8 756 aa11.26□□□□□ -0.61
NPAS3-205ENST00000547068 BFSP1Q12934 665 aa11.26□□□□□ -0.61
NPAS3-205ENST00000547068 FASTKD3Q14CZ7 662 aaKnown RBP11.26□□□□□ -0.61
NPAS3-205ENST00000547068 GRIK5Q16478 980 aa11.26□□□□□ -0.61
NPAS3-205ENST00000547068 TRIM42Q8IWZ5 723 aa11.26□□□□□ -0.61
NPAS3-205ENST00000547068 ADGRF4Q8IZF3 695 aa11.26□□□□□ -0.61
NPAS3-205ENST00000547068 LRRC47Q8N1G4 583 aaKnown RBP11.26□□□□□ -0.61
NPAS3-205ENST00000547068 AGBL3Q8NEM8 1001 aa11.26□□□□□ -0.61
NPAS3-205ENST00000547068 TCP10LQ8TDR4 215 aa11.26□□□□□ -0.61
NPAS3-205ENST00000547068 EPS8L1Q8TE68 723 aa11.26□□□□□ -0.61
NPAS3-205ENST00000547068 VTI1AQ96AJ9 217 aa11.26□□□□□ -0.61
NPAS3-205ENST00000547068 PANX3Q96QZ0 392 aa11.26□□□□□ -0.61
NPAS3-205ENST00000547068 KCNK13Q9HB14 408 aa11.26□□□□□ -0.61
NPAS3-205ENST00000547068 ALG13Q9NP73 1137 aaKnown RBP11.26□□□□□ -0.61
NPAS3-205ENST00000547068 SSU72Q9NP77 194 aaKnown RBP11.26□□□□□ -0.61
NPAS3-205ENST00000547068 SBF1O95248 1867 aa11.26□□□□□ -0.61
NPAS3-205ENST00000547068 C2orf71A6NGG8 1288 aa11.26□□□□□ -0.61
NPAS3-205ENST00000547068 USP17L15C9J2P7 530 aa11.26□□□□□ -0.61
NPAS3-205ENST00000547068 USP17L13C9JLJ4 530 aa11.26□□□□□ -0.61
NPAS3-205ENST00000547068 USP17L11C9JVI0 530 aa11.26□□□□□ -0.61
NPAS3-205ENST00000547068 USP17L18D6R9N7 530 aa11.26□□□□□ -0.61
NPAS3-205ENST00000547068 USP17L22D6RA61 530 aa11.26□□□□□ -0.61
NPAS3-205ENST00000547068 USP17L17D6RBQ6 530 aa11.26□□□□□ -0.61
NPAS3-205ENST00000547068 USP17L19D6RCP7 530 aa11.26□□□□□ -0.61
NPAS3-205ENST00000547068 USP17L20D6RJB6 530 aa11.26□□□□□ -0.61
NPAS3-205ENST00000547068 FCHO1O14526 889 aa11.26□□□□□ -0.61
NPAS3-205ENST00000547068 ATP9BO43861 1147 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms