RNA–Protein interactions for RNA: ENST00000547055.1

RAB3IP-209, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-209ENST00000547055 RLIMQ9NVW2 624 aa4.28□□□□□ -1.72
RAB3IP-209ENST00000547055 CFAP97Q9P2B7 532 aa4.28□□□□□ -1.72
RAB3IP-209ENST00000547055 RNF7Q9UBF6 113 aa4.28□□□□□ -1.72
RAB3IP-209ENST00000547055 SPATA31A3Q5VYP0 1347 aa4.27□□□□□ -1.73
RAB3IP-209ENST00000547055 ADGRA2Q96PE1 1338 aa4.27□□□□□ -1.73
RAB3IP-209ENST00000547055 NT5C1B-RDH14C9J2C7 533 aa4.27□□□□□ -1.73
RAB3IP-209ENST00000547055 URI1O94763 535 aaPredicted RBP4.27□□□□□ -1.73
RAB3IP-209ENST00000547055 RHOP08100 348 aa4.27□□□□□ -1.73
RAB3IP-209ENST00000547055 NR2F6P10588 404 aa4.27□□□□□ -1.73
RAB3IP-209ENST00000547055 LPOP22079 712 aaPredicted RBP4.27□□□□□ -1.73
RAB3IP-209ENST00000547055 ITPKBP27987 946 aa4.27□□□□□ -1.73
RAB3IP-209ENST00000547055 NDUFV1P49821 464 aa4.27□□□□□ -1.73
RAB3IP-209ENST00000547055 CDKN1CP49918 316 aaPredicted RBP4.27□□□□□ -1.73
RAB3IP-209ENST00000547055 KRTAP10-11P60412 298 aa4.27□□□□□ -1.73
RAB3IP-209ENST00000547055 DSC2Q02487 901 aa4.27□□□□□ -1.73
RAB3IP-209ENST00000547055 FAM50AQ14320 339 aaKnown RBP4.27□□□□□ -1.73
RAB3IP-209ENST00000547055 PTPN21Q16825 1174 aa4.27□□□□□ -1.73
RAB3IP-209ENST00000547055 EPHA10Q5JZY3 1008 aa4.27□□□□□ -1.73
RAB3IP-209ENST00000547055 PAPD7Q5XG87 772 aaKnown RBP4.27□□□□□ -1.73
RAB3IP-209ENST00000547055 FCRLBQ6BAA4 426 aa4.27□□□□□ -1.73
RAB3IP-209ENST00000547055 CAMKK1Q8N5S9 505 aa4.27□□□□□ -1.73
RAB3IP-209ENST00000547055 DDB2Q92466 427 aa4.27□□□□□ -1.73
RAB3IP-209ENST00000547055 SMG7Q92540 1137 aaKnown RBP4.27□□□□□ -1.73
RAB3IP-209ENST00000547055 ANKS1AQ92625 1134 aa4.27□□□□□ -1.73
RAB3IP-209ENST00000547055 PBKQ96KB5 322 aa4.27□□□□□ -1.73
RAB3IP-209ENST00000547055 SMOC2Q9H3U7 446 aa4.27□□□□□ -1.73
RAB3IP-209ENST00000547055 ADAM21Q9UKJ8 722 aa4.27□□□□□ -1.73
RAB3IP-209ENST00000547055 COL3A1P02461 1466 aaPredicted RBP4.26□□□□□ -1.73
RAB3IP-209ENST00000547055 WIPF3A6NGB9 483 aa4.26□□□□□ -1.73
RAB3IP-209ENST00000547055 LRRC14BA6NHZ5 514 aa4.26□□□□□ -1.73
RAB3IP-209ENST00000547055 CHEK2O96017 543 aa4.26□□□□□ -1.73
RAB3IP-209ENST00000547055 PRKCGP05129 697 aa4.26□□□□□ -1.73
RAB3IP-209ENST00000547055 ITGALP20701 1170 aa4.26□□□□□ -1.73
RAB3IP-209ENST00000547055 CCND1P24385 295 aa4.26□□□□□ -1.73
RAB3IP-209ENST00000547055 ZNF135P52742 658 aaPredicted RBP4.26□□□□□ -1.73
RAB3IP-209ENST00000547055 HABP2Q14520 560 aaPredicted RBP4.26□□□□□ -1.73
RAB3IP-209ENST00000547055 ODF1Q14990 250 aa4.26□□□□□ -1.73
RAB3IP-209ENST00000547055 KIAA1614Q5VZ46 1190 aa4.26□□□□□ -1.73
RAB3IP-209ENST00000547055 TAF2Q6P1X5 1199 aa4.26□□□□□ -1.73
RAB3IP-209ENST00000547055 MIER2Q8N344 545 aa4.26□□□□□ -1.73
RAB3IP-209ENST00000547055 C3orf20Q8ND61 904 aa4.26□□□□□ -1.73
RAB3IP-209ENST00000547055 PSD4Q8NDX1 1056 aa4.26□□□□□ -1.73
RAB3IP-209ENST00000547055 DPF1Q92782 380 aa4.26□□□□□ -1.73
RAB3IP-209ENST00000547055 FKBP10Q96AY3 582 aa4.26□□□□□ -1.73
RAB3IP-209ENST00000547055 OSBPL9Q96SU4 736 aa4.26□□□□□ -1.73
RAB3IP-209ENST00000547055 CNPPD1Q9BV87 410 aa4.26□□□□□ -1.73
RAB3IP-209ENST00000547055 ALG8Q9BVK2 526 aa4.26□□□□□ -1.73
RAB3IP-209ENST00000547055 ACTRT3Q9BYD9 372 aa4.26□□□□□ -1.73
RAB3IP-209ENST00000547055 SIK2Q9H0K1 926 aa4.26□□□□□ -1.73
RAB3IP-209ENST00000547055 EHD3Q9NZN3 535 aa4.26□□□□□ -1.73
RAB3IP-209ENST00000547055 PADI4Q9UM07 663 aa4.26□□□□□ -1.73
RAB3IP-209ENST00000547055 POLHQ9Y253 713 aa4.26□□□□□ -1.73
RAB3IP-209ENST00000547055 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.26□□□□□ -1.73
RAB3IP-209ENST00000547055 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.26□□□□□ -1.73
RAB3IP-209ENST00000547055 AOX1Q06278 1338 aa4.25□□□□□ -1.73
RAB3IP-209ENST00000547055 SHROOM4Q9ULL8 1493 aa4.25□□□□□ -1.73
RAB3IP-209ENST00000547055 KRTAP29-1A8MX34 341 aaPredicted RBP4.25□□□□□ -1.73
RAB3IP-209ENST00000547055 ALG1L2C9J202 215 aa4.25□□□□□ -1.73
RAB3IP-209ENST00000547055 VPS4BO75351 444 aa4.25□□□□□ -1.73
RAB3IP-209ENST00000547055 SOAT2O75908 522 aa4.25□□□□□ -1.73
RAB3IP-209ENST00000547055 ARIH2O95376 493 aa4.25□□□□□ -1.73
RAB3IP-209ENST00000547055 EBLN1P0CF75 366 aa4.25□□□□□ -1.73
RAB3IP-209ENST00000547055 ZFXP17010 805 aaPredicted RBP4.25□□□□□ -1.73
RAB3IP-209ENST00000547055 CHRM3P20309 590 aa4.25□□□□□ -1.73
RAB3IP-209ENST00000547055 PRDX5P30044 214 aa4.25□□□□□ -1.73
RAB3IP-209ENST00000547055 PHKA1P46020 1223 aa4.25□□□□□ -1.73
RAB3IP-209ENST00000547055 PIK3CGP48736 1102 aa4.25□□□□□ -1.73
RAB3IP-209ENST00000547055 KRTAP10-7P60409 375 aaPredicted RBP4.25□□□□□ -1.73
RAB3IP-209ENST00000547055 PLAC9Q5JTB6 97 aa4.25□□□□□ -1.73
RAB3IP-209ENST00000547055 RBM20Q5T481 1227 aaKnown RBP4.25□□□□□ -1.73
RAB3IP-209ENST00000547055 PRPF38AQ8NAV1 312 aaKnown RBP4.25□□□□□ -1.73
RAB3IP-209ENST00000547055 RFKQ969G6 155 aa4.25□□□□□ -1.73
RAB3IP-209ENST00000547055 C1orf43Q9BWL3 253 aa4.25□□□□□ -1.73
RAB3IP-209ENST00000547055 SLC13A1Q9BZW2 595 aa4.25□□□□□ -1.73
RAB3IP-209ENST00000547055 AMBRA1Q9C0C7 1298 aa4.25□□□□□ -1.73
RAB3IP-209ENST00000547055 GPR35Q9HC97 309 aa4.25□□□□□ -1.73
RAB3IP-209ENST00000547055 MRPS18AQ9NVS2 196 aaKnown RBP4.25□□□□□ -1.73
RAB3IP-209ENST00000547055 ETAA1Q9NY74 926 aa4.25□□□□□ -1.73
RAB3IP-209ENST00000547055 PCDHA3Q9Y5H8 950 aa4.25□□□□□ -1.73
RAB3IP-209ENST00000547055 SBNO2Q9Y2G9 1366 aa4.25□□□□□ -1.73
RAB3IP-209ENST00000547055 TNKSO95271 1327 aa4.24□□□□□ -1.73
RAB3IP-209ENST00000547055 PRSS29PA6NIE9 313 aa4.24□□□□□ -1.73
RAB3IP-209ENST00000547055 KIF20AO95235 890 aa4.24□□□□□ -1.73
RAB3IP-209ENST00000547055 CELA2AP08217 269 aa4.24□□□□□ -1.73
RAB3IP-209ENST00000547055 FTH1P19P0C7X4 201 aa4.24□□□□□ -1.73
RAB3IP-209ENST00000547055 RARBP10826 455 aa4.24□□□□□ -1.73
RAB3IP-209ENST00000547055 CCT8P50990 548 aa4.24□□□□□ -1.73
RAB3IP-209ENST00000547055 FXR1P51114 621 aaKnown RBP eCLIP4.24□□□□□ -1.73
RAB3IP-209ENST00000547055 ZNF81P51508 661 aa4.24□□□□□ -1.73
RAB3IP-209ENST00000547055 EVA1CP58658 441 aa4.24□□□□□ -1.73
RAB3IP-209ENST00000547055 BMPR2Q13873 1038 aa4.24□□□□□ -1.73
RAB3IP-209ENST00000547055 SRSF7Q16629 238 aaKnown RBP eCLIP4.24□□□□□ -1.73
RAB3IP-209ENST00000547055 THEMIS2Q5TEJ8 643 aa4.24□□□□□ -1.73
RAB3IP-209ENST00000547055 SUMO4Q6EEV6 95 aa4.24□□□□□ -1.73
RAB3IP-209ENST00000547055 TNPO1Q92973 898 aaKnown RBP4.24□□□□□ -1.73
RAB3IP-209ENST00000547055 ABCF2Q9UG63 623 aa4.24□□□□□ -1.73
RAB3IP-209ENST00000547055 AGAP1Q9UPQ3 857 aa4.24□□□□□ -1.73
RAB3IP-209ENST00000547055 RAD54BQ9Y620 910 aa4.24□□□□□ -1.73
RAB3IP-209ENST00000547055 WDR91A4D1P6 747 aa4.23□□□□□ -1.73
RAB3IP-209ENST00000547055 SLC16A6O15403 523 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms