RNA–Protein interactions for RNA: ENST00000546033.1

PTP4A1P2-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 2, humanhuman

BASIC

Gene PTP4A1P2, Length 454 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P2-201ENST00000546033 MTSS1LQ765P7 747 aa16.51■□□□□ 0.23
PTP4A1P2-201ENST00000546033 SLC9A9Q8IVB4 645 aa16.51■□□□□ 0.23
PTP4A1P2-201ENST00000546033 FMR1NBQ8N0W7 255 aaPredicted RBP16.51■□□□□ 0.23
PTP4A1P2-201ENST00000546033 TOP6BLQ8N6T0 577 aa16.51■□□□□ 0.23
PTP4A1P2-201ENST00000546033 OR5B17Q8NGF7 314 aa16.51■□□□□ 0.23
PTP4A1P2-201ENST00000546033 SPATA18Q8TC71 538 aa16.51■□□□□ 0.23
PTP4A1P2-201ENST00000546033 C2orf15Q8WU43 125 aaKnown RBP16.51■□□□□ 0.23
PTP4A1P2-201ENST00000546033 BORCS6Q96GS4 357 aa16.51■□□□□ 0.23
PTP4A1P2-201ENST00000546033 HPDLQ96IR7 371 aa16.51■□□□□ 0.23
PTP4A1P2-201ENST00000546033 AVENQ9NQS1 362 aaPredicted RBP16.51■□□□□ 0.23
PTP4A1P2-201ENST00000546033 HCFC1R1Q9NWW0 138 aa16.51■□□□□ 0.23
PTP4A1P2-201ENST00000546033 GDAP2Q9NXN4 497 aa16.51■□□□□ 0.23
PTP4A1P2-201ENST00000546033 HSFX1Q9UBD0 423 aa16.51■□□□□ 0.23
PTP4A1P2-201ENST00000546033 SIX4Q9UIU6 781 aa16.51■□□□□ 0.23
PTP4A1P2-201ENST00000546033 FRMD4BQ9Y2L6 1034 aa16.51■□□□□ 0.23
PTP4A1P2-201ENST00000546033 SNX9Q9Y5X1 595 aa16.51■□□□□ 0.23
PTP4A1P2-201ENST00000546033 NOTCH4Q99466 2003 aa16.5■□□□□ 0.23
PTP4A1P2-201ENST00000546033 MTMR11A4FU01 709 aa16.5■□□□□ 0.23
PTP4A1P2-201ENST00000546033 SMC2O95347 1197 aa16.5■□□□□ 0.23
PTP4A1P2-201ENST00000546033 LHX1P48742 406 aa16.5■□□□□ 0.23
PTP4A1P2-201ENST00000546033 TUFMP49411 452 aaKnown RBP16.5■□□□□ 0.23
PTP4A1P2-201ENST00000546033 AP3M2P53677 418 aa16.5■□□□□ 0.23
PTP4A1P2-201ENST00000546033 TRPC3Q13507 836 aa16.5■□□□□ 0.23
PTP4A1P2-201ENST00000546033 CENPPQ6IPU0 288 aa16.5■□□□□ 0.23
PTP4A1P2-201ENST00000546033 PDZD4Q76G19 769 aaPredicted RBP16.5■□□□□ 0.23
PTP4A1P2-201ENST00000546033 TRAPPC11Q7Z392 1133 aa16.5■□□□□ 0.23
PTP4A1P2-201ENST00000546033 BMP8AQ7Z5Y6 402 aa16.5■□□□□ 0.23
PTP4A1P2-201ENST00000546033 SUGP1Q8IWZ8 645 aaKnown RBP16.5■□□□□ 0.23
PTP4A1P2-201ENST00000546033 TMEM174Q8WUU8 243 aa16.5■□□□□ 0.23
PTP4A1P2-201ENST00000546033 FGF13Q92913 245 aa16.5■□□□□ 0.23
PTP4A1P2-201ENST00000546033 ZCWPW1Q9H0M4 648 aa16.5■□□□□ 0.23
PTP4A1P2-201ENST00000546033 KCTD10Q9H3F6 313 aa16.5■□□□□ 0.23
PTP4A1P2-201ENST00000546033 ASAH2Q9NR71 780 aa16.5■□□□□ 0.23
PTP4A1P2-201ENST00000546033 YIPF1Q9Y548 306 aa16.5■□□□□ 0.23
PTP4A1P2-201ENST00000546033 PHACTR2O75167 634 aa16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 TRIOO75962 3097 aa16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 CLSTN1O94985 981 aa16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 NR3C1P04150 777 aa16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 RPL13P26373 211 aaKnown RBP16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 VEPH1Q14D04 833 aa16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 NFE2Q16621 373 aaPredicted RBP16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 MGAT5BQ3V5L5 792 aa16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 CEP135Q66GS9 1140 aa16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 HFE2Q6ZVN8 426 aa16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 DPH6Q7L8W6 267 aa16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 ITIH5Q86UX2 942 aa16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 GUF1Q8N442 669 aaKnown RBP16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 PDCL2Q8N4E4 241 aa16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 ATAD1Q8NBU5 361 aa16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 OR10T2Q8NGX3 314 aa16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 CXorf38Q8TB03 319 aa16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 SPPL2BQ8TCT7 592 aa16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 FAM84AQ96KN4 292 aa16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 TIGD1Q96MW7 591 aa16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 TMEM209Q96SK2 561 aa16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 ACBD6Q9BR61 282 aa16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 GTPBP4Q9BZE4 634 aaKnown RBP16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 DMAC2Q9NW81 257 aa16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 DDX43Q9NXZ2 648 aaKnown RBP16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 GDE1Q9NZC3 331 aa16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 L1RE1Q9UN81 338 aa16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 DUSP12Q9UNI6 340 aa16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 TRAF3IP3Q9Y228 551 aa16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 SLC27A5Q9Y2P5 690 aa16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 ASB3Q9Y575 518 aa16.49■□□□□ 0.23
PTP4A1P2-201ENST00000546033 PTPRJQ12913 1337 aa16.48■□□□□ 0.23
PTP4A1P2-201ENST00000546033 MICAL2O94851 1124 aa16.48■□□□□ 0.23
PTP4A1P2-201ENST00000546033 PCSK1P29120 753 aa16.48■□□□□ 0.23
PTP4A1P2-201ENST00000546033 PNOCQ13519 176 aa16.48■□□□□ 0.23
PTP4A1P2-201ENST00000546033 ADGRF2Q8IZF7 708 aa16.48■□□□□ 0.23
PTP4A1P2-201ENST00000546033 ITFG1Q8TB96 612 aa16.48■□□□□ 0.23
PTP4A1P2-201ENST00000546033 FAM200AQ8TCP9 573 aa16.48■□□□□ 0.23
PTP4A1P2-201ENST00000546033 ING5Q8WYH8 240 aa16.48■□□□□ 0.23
PTP4A1P2-201ENST00000546033 GSDMAQ96QA5 445 aa16.48■□□□□ 0.23
PTP4A1P2-201ENST00000546033 MMS19Q96T76 1030 aa16.48■□□□□ 0.23
PTP4A1P2-201ENST00000546033 SEPT5Q99719 369 aaPredicted RBP16.48■□□□□ 0.23
PTP4A1P2-201ENST00000546033 MFSD1Q9H3U5 465 aa16.48■□□□□ 0.23
PTP4A1P2-201ENST00000546033 CEP72Q9P209 647 aa16.48■□□□□ 0.23
PTP4A1P2-201ENST00000546033 FBXL21Q9UKT6 434 aa16.48■□□□□ 0.23
PTP4A1P2-201ENST00000546033 MAPK8IP1Q9UQF2 711 aa16.48■□□□□ 0.23
PTP4A1P2-201ENST00000546033 PCDHB5Q9Y5E4 795 aa16.48■□□□□ 0.23
PTP4A1P2-201ENST00000546033 ANHXE9PGG2 379 aa16.47■□□□□ 0.23
PTP4A1P2-201ENST00000546033 KINO60870 393 aaKnown RBP16.47■□□□□ 0.23
PTP4A1P2-201ENST00000546033 MYL4P12829 197 aa16.47■□□□□ 0.23
PTP4A1P2-201ENST00000546033 ATICP31939 592 aa16.47■□□□□ 0.23
PTP4A1P2-201ENST00000546033 TNNC1P63316 161 aa16.47■□□□□ 0.23
PTP4A1P2-201ENST00000546033 BIRC3Q13489 604 aa16.47■□□□□ 0.23
PTP4A1P2-201ENST00000546033 SNW1Q13573 536 aaKnown RBP16.47■□□□□ 0.23
PTP4A1P2-201ENST00000546033 HTR4Q13639 388 aa16.47■□□□□ 0.23
PTP4A1P2-201ENST00000546033 TAF12Q16514 161 aa16.47■□□□□ 0.23
PTP4A1P2-201ENST00000546033 NFIL3Q16649 462 aa16.47■□□□□ 0.23
PTP4A1P2-201ENST00000546033 NPAS3Q8IXF0 933 aa16.47■□□□□ 0.23
PTP4A1P2-201ENST00000546033 FBXL6Q8N531 539 aa16.47■□□□□ 0.23
PTP4A1P2-201ENST00000546033 ENGASEQ8NFI3 743 aa16.47■□□□□ 0.23
PTP4A1P2-201ENST00000546033 PARD3BQ8TEW8 1205 aa16.47■□□□□ 0.23
PTP4A1P2-201ENST00000546033 RSAD2Q8WXG1 361 aa16.47■□□□□ 0.23
PTP4A1P2-201ENST00000546033 SMARCE1Q969G3 411 aa16.47■□□□□ 0.23
PTP4A1P2-201ENST00000546033 SYAP1Q96A49 352 aaPredicted RBP16.47■□□□□ 0.23
PTP4A1P2-201ENST00000546033 ASIC4Q96FT7 647 aa16.47■□□□□ 0.23
PTP4A1P2-201ENST00000546033 RTP3Q9BQQ7 232 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms