RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 CDH16O75309 829 aa15.9■□□□□ 0.14
USP28-214ENST00000545540 GHRP10912 638 aa15.9■□□□□ 0.14
USP28-214ENST00000545540 NEDD9Q14511 834 aa15.9■□□□□ 0.14
USP28-214ENST00000545540 WDR72Q3MJ13 1102 aa15.9■□□□□ 0.14
USP28-214ENST00000545540 MSS51Q4VC12 460 aa15.9■□□□□ 0.14
USP28-214ENST00000545540 GPAT2Q6NUI2 795 aa15.9■□□□□ 0.14
USP28-214ENST00000545540 USP37Q86T82 979 aa15.9■□□□□ 0.14
USP28-214ENST00000545540 SAMD3Q8N6K7 520 aa15.9■□□□□ 0.14
USP28-214ENST00000545540 GRK7Q8WTQ7 553 aa15.9■□□□□ 0.14
USP28-214ENST00000545540 NTPCRQ9BSD7 190 aaKnown RBP15.9■□□□□ 0.14
USP28-214ENST00000545540 TRABDQ9H4I3 376 aa15.9■□□□□ 0.14
USP28-214ENST00000545540 KLHL14Q9P2G3 628 aa15.9■□□□□ 0.14
USP28-214ENST00000545540 ARHGAP28Q9P2N2 729 aa15.9■□□□□ 0.14
USP28-214ENST00000545540 MCM8Q9UJA3 840 aa15.9■□□□□ 0.14
USP28-214ENST00000545540 PLSCR1O15162 318 aa15.89■□□□□ 0.13
USP28-214ENST00000545540 GSCP56915 257 aaPredicted RBP15.89■□□□□ 0.13
USP28-214ENST00000545540 CCNG2Q16589 344 aa15.89■□□□□ 0.13
USP28-214ENST00000545540 VSIG1Q86XK7 387 aa15.89■□□□□ 0.13
USP28-214ENST00000545540 TRAPPC12Q8WVT3 735 aa15.89■□□□□ 0.13
USP28-214ENST00000545540 KIAA1683Q9H0B3 1180 aa15.89■□□□□ 0.13
USP28-214ENST00000545540 MYLK2Q9H1R3 596 aa15.89■□□□□ 0.13
USP28-214ENST00000545540 ARL2BPQ9Y2Y0 163 aa15.89■□□□□ 0.13
USP28-214ENST00000545540 KLRC2P26717 231 aa15.89■□□□□ 0.13
USP28-214ENST00000545540 CLNS1AP54105 237 aaKnown RBP15.89■□□□□ 0.13
USP28-214ENST00000545540 TFDP1Q14186 410 aa15.89■□□□□ 0.13
USP28-214ENST00000545540 C15orf39Q6ZRI6 1047 aa15.89■□□□□ 0.13
USP28-214ENST00000545540 NIPA1Q7RTP0 329 aa15.89■□□□□ 0.13
USP28-214ENST00000545540 LIASO43766 372 aa15.88■□□□□ 0.13
USP28-214ENST00000545540 PLA2G6O60733 806 aa15.88■□□□□ 0.13
USP28-214ENST00000545540 ELF1P32519 619 aa15.88■□□□□ 0.13
USP28-214ENST00000545540 TMEM132AQ24JP5 1023 aa15.88■□□□□ 0.13
USP28-214ENST00000545540 VTI1AQ96AJ9 217 aa15.88■□□□□ 0.13
USP28-214ENST00000545540 SLITRK1Q96PX8 696 aa15.88■□□□□ 0.13
USP28-214ENST00000545540 MAK16Q9BXY0 300 aaKnown RBP15.88■□□□□ 0.13
USP28-214ENST00000545540 RNF19AQ9NV58 838 aa15.88■□□□□ 0.13
USP28-214ENST00000545540 POLIQ9UNA4 740 aa15.88■□□□□ 0.13
USP28-214ENST00000545540 AGTPBP1Q9UPW5 1226 aa15.88■□□□□ 0.13
USP28-214ENST00000545540 MAPK13O15264 365 aa15.88■□□□□ 0.13
USP28-214ENST00000545540 OAS1P00973 400 aaKnown RBP15.88■□□□□ 0.13
USP28-214ENST00000545540 RFC1P35251 1148 aaPredicted RBP15.88■□□□□ 0.13
USP28-214ENST00000545540 FLAD1Q8NFF5 587 aa15.88■□□□□ 0.13
USP28-214ENST00000545540 JOSD2Q8TAC2 188 aa15.88■□□□□ 0.13
USP28-214ENST00000545540 NSUN6Q8TEA1 469 aaKnown RBP15.88■□□□□ 0.13
USP28-214ENST00000545540 SENP7Q9BQF6 1050 aa15.88■□□□□ 0.13
USP28-214ENST00000545540 FAM167BQ9BTA0 163 aa15.88■□□□□ 0.13
USP28-214ENST00000545540 HACL1Q9UJ83 578 aa15.88■□□□□ 0.13
USP28-214ENST00000545540 PHTF1Q9UMS5 762 aa15.88■□□□□ 0.13
USP28-214ENST00000545540 FAM47DPA6NHR8 397 aa15.88■□□□□ 0.13
USP28-214ENST00000545540 TBC1D12O60347 775 aa15.88■□□□□ 0.13
USP28-214ENST00000545540 GRAP2O75791 330 aa15.88■□□□□ 0.13
USP28-214ENST00000545540 KRT4P19013 534 aa15.88■□□□□ 0.13
USP28-214ENST00000545540 PTP4A2Q12974 167 aa15.88■□□□□ 0.13
USP28-214ENST00000545540 DNAJC24Q6P3W2 148 aa15.88■□□□□ 0.13
USP28-214ENST00000545540 ARHGEF18Q6ZSZ5 1173 aa15.88■□□□□ 0.13
USP28-214ENST00000545540 CCDC77Q9BR77 488 aa15.88■□□□□ 0.13
USP28-214ENST00000545540 F5H423 210 aaPredicted RBP15.87■□□□□ 0.13
USP28-214ENST00000545540 BNIP1Q12981 228 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 PSMD6Q15008 389 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 BBS9Q3SYG4 887 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 FNBP1LQ5T0N5 605 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 ABHD15Q6UXT9 468 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 FAM83AQ86UY5 434 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 KIAA0319LQ8IZA0 1049 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 MCPH1Q8NEM0 835 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 MAML1Q92585 1016 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 LPAR1Q92633 364 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 NPHS2Q9NP85 383 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 NUMBLQ9Y6R0 609 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 BRWD3Q6RI45 1802 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 AVILO75366 819 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 GARTP22102 1010 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 SLC1A1P43005 524 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 SH3PXD2AQ5TCZ1 1133 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 TMEM192Q8IY95 271 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 HSPH1Q92598 858 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 CCDC134Q9H6E4 229 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 AVENQ9NQS1 362 aaPredicted RBP15.87■□□□□ 0.13
USP28-214ENST00000545540 PDLIM7Q9NR12 457 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 SYNPO2Q9UMS6 1093 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 IL1R2P27930 398 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 SPOCD1Q6ZMY3 1216 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 RFX8Q6ZV50 586 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 ZC3H18Q86VM9 953 aaKnown RBP15.87■□□□□ 0.13
USP28-214ENST00000545540 RHPN2Q8IUC4 686 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 WDTC1Q8N5D0 677 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 CNKSR2Q8WXI2 1034 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 SLC7A3Q8WY07 619 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 MRPL47Q9HD33 250 aaKnown RBP15.87■□□□□ 0.13
USP28-214ENST00000545540 ZNF302Q9NR11 478 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 PARVAQ9NVD7 372 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 CYP39A1Q9NYL5 469 aa15.87■□□□□ 0.13
USP28-214ENST00000545540 ADRA1DP25100 572 aa15.86■□□□□ 0.13
USP28-214ENST00000545540 FAXCQ5TGI0 409 aa15.86■□□□□ 0.13
USP28-214ENST00000545540 PLEKHA7Q6IQ23 1121 aa15.86■□□□□ 0.13
USP28-214ENST00000545540 NPNTQ6UXI9 565 aa15.86■□□□□ 0.13
USP28-214ENST00000545540 ACTL9Q8TC94 416 aa15.86■□□□□ 0.13
USP28-214ENST00000545540 PRPF31Q8WWY3 499 aaKnown RBP15.86■□□□□ 0.13
USP28-214ENST00000545540 CISHQ9NSE2 258 aa15.86■□□□□ 0.13
USP28-214ENST00000545540 NKX1-2Q9UD57 310 aaPredicted RBP15.86■□□□□ 0.13
USP28-214ENST00000545540 ZNF214Q9UL59 606 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms