RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 HCFC1R1Q9NWW0 138 aa16.91■□□□□ 0.3
CCDC78-216ENST00000544996 IGSF9Q9P2J2 1179 aa16.91■□□□□ 0.3
CCDC78-216ENST00000544996 CDH7Q9ULB5 785 aa16.91■□□□□ 0.3
CCDC78-216ENST00000544996 TRAF3IP3Q9Y228 551 aa16.91■□□□□ 0.3
CCDC78-216ENST00000544996 TCHHQ07283 1943 aa16.91■□□□□ 0.3
CCDC78-216ENST00000544996 PHACTR2O75167 634 aa16.9■□□□□ 0.3
CCDC78-216ENST00000544996 RHOP08100 348 aa16.9■□□□□ 0.3
CCDC78-216ENST00000544996 RPL13P26373 211 aaKnown RBP16.9■□□□□ 0.3
CCDC78-216ENST00000544996 ALDH1A3P47895 512 aa16.9■□□□□ 0.3
CCDC78-216ENST00000544996 LHX1P48742 406 aa16.9■□□□□ 0.3
CCDC78-216ENST00000544996 MYL7Q01449 175 aa16.9■□□□□ 0.3
CCDC78-216ENST00000544996 TSPY1Q01534 308 aa16.9■□□□□ 0.3
CCDC78-216ENST00000544996 SIGLEC14Q08ET2 396 aa16.9■□□□□ 0.3
CCDC78-216ENST00000544996 TRPC3Q13507 836 aa16.9■□□□□ 0.3
CCDC78-216ENST00000544996 SLC39A12Q504Y0 691 aa16.9■□□□□ 0.3
CCDC78-216ENST00000544996 CYP4A22Q5TCH4 519 aa16.9■□□□□ 0.3
CCDC78-216ENST00000544996 CEP135Q66GS9 1140 aa16.9■□□□□ 0.3
CCDC78-216ENST00000544996 CENPPQ6IPU0 288 aa16.9■□□□□ 0.3
CCDC78-216ENST00000544996 DPH6Q7L8W6 267 aa16.9■□□□□ 0.3
CCDC78-216ENST00000544996 DCP1BQ8IZD4 617 aaKnown RBP16.9■□□□□ 0.3
CCDC78-216ENST00000544996 PDCL2Q8N4E4 241 aa16.9■□□□□ 0.3
CCDC78-216ENST00000544996 C2orf15Q8WU43 125 aaKnown RBP16.9■□□□□ 0.3
CCDC78-216ENST00000544996 NXPE3Q969Y0 559 aa16.9■□□□□ 0.3
CCDC78-216ENST00000544996 TMEM209Q96SK2 561 aa16.9■□□□□ 0.3
CCDC78-216ENST00000544996 CORO1BQ9BR76 489 aa16.9■□□□□ 0.3
CCDC78-216ENST00000544996 KCNK12Q9HB15 430 aa16.9■□□□□ 0.3
CCDC78-216ENST00000544996 AVENQ9NQS1 362 aaPredicted RBP16.9■□□□□ 0.3
CCDC78-216ENST00000544996 HSFX1Q9UBD0 423 aa16.9■□□□□ 0.3
CCDC78-216ENST00000544996 MRPS23Q9Y3D9 190 aaKnown RBP16.9■□□□□ 0.3
CCDC78-216ENST00000544996 ANK1P16157 1881 aa16.9■□□□□ 0.3
CCDC78-216ENST00000544996 MTMR11A4FU01 709 aa16.89■□□□□ 0.29
CCDC78-216ENST00000544996 ZNF197O14709 1029 aa16.89■□□□□ 0.29
CCDC78-216ENST00000544996 NR2F2P24468 414 aa16.89■□□□□ 0.29
CCDC78-216ENST00000544996 TUFMP49411 452 aaKnown RBP16.89■□□□□ 0.29
CCDC78-216ENST00000544996 EPHB3P54753 998 aa16.89■□□□□ 0.29
CCDC78-216ENST00000544996 TDGQ13569 410 aa16.89■□□□□ 0.29
CCDC78-216ENST00000544996 ELOA2Q8IYF1 753 aaPredicted RBP16.89■□□□□ 0.29
CCDC78-216ENST00000544996 ATAD1Q8NBU5 361 aa16.89■□□□□ 0.29
CCDC78-216ENST00000544996 LEMD2Q8NC56 503 aa16.89■□□□□ 0.29
CCDC78-216ENST00000544996 PARD3BQ8TEW8 1205 aa16.89■□□□□ 0.29
CCDC78-216ENST00000544996 FGF13Q92913 245 aa16.89■□□□□ 0.29
CCDC78-216ENST00000544996 RTP3Q9BQQ7 232 aa16.89■□□□□ 0.29
CCDC78-216ENST00000544996 DDX43Q9NXZ2 648 aaKnown RBP16.89■□□□□ 0.29
CCDC78-216ENST00000544996 L1RE1Q9UN81 338 aa16.89■□□□□ 0.29
CCDC78-216ENST00000544996 SLC27A5Q9Y2P5 690 aa16.89■□□□□ 0.29
CCDC78-216ENST00000544996 YIPF1Q9Y548 306 aa16.89■□□□□ 0.29
CCDC78-216ENST00000544996 MTCL1Q9Y4B5 1905 aaKnown RBP16.89■□□□□ 0.29
CCDC78-216ENST00000544996 TMEM221A6NGB7 291 aa16.88■□□□□ 0.29
CCDC78-216ENST00000544996 M0R296 226 aa16.88■□□□□ 0.29
CCDC78-216ENST00000544996 MAPK13O15264 365 aa16.88■□□□□ 0.29
CCDC78-216ENST00000544996 PCSK1P29120 753 aa16.88■□□□□ 0.29
CCDC78-216ENST00000544996 CASP4P49662 377 aa16.88■□□□□ 0.29
CCDC78-216ENST00000544996 CLDN10P78369 228 aa16.88■□□□□ 0.29
CCDC78-216ENST00000544996 BIRC3Q13489 604 aa16.88■□□□□ 0.29
CCDC78-216ENST00000544996 NFE2Q16621 373 aaPredicted RBP16.88■□□□□ 0.29
CCDC78-216ENST00000544996 NFIL3Q16649 462 aa16.88■□□□□ 0.29
CCDC78-216ENST00000544996 ZNF658Q5TYW1 1059 aaPredicted RBP16.88■□□□□ 0.29
CCDC78-216ENST00000544996 SCARA3Q6AZY7 606 aa16.88■□□□□ 0.29
CCDC78-216ENST00000544996 PDZD4Q76G19 769 aaPredicted RBP16.88■□□□□ 0.29
CCDC78-216ENST00000544996 ADGRF2Q8IZF7 708 aa16.88■□□□□ 0.29
CCDC78-216ENST00000544996 ITFG1Q8TB96 612 aa16.88■□□□□ 0.29
CCDC78-216ENST00000544996 MMS19Q96T76 1030 aa16.88■□□□□ 0.29
CCDC78-216ENST00000544996 ACBD6Q9BR61 282 aa16.88■□□□□ 0.29
CCDC78-216ENST00000544996 PCDHA5Q9Y5H7 936 aa16.88■□□□□ 0.29
CCDC78-216ENST00000544996 DENND4AQ7Z401 1863 aa16.87■□□□□ 0.29
CCDC78-216ENST00000544996 CLSTN1O94985 981 aa16.87■□□□□ 0.29
CCDC78-216ENST00000544996 VNN2O95498 520 aa16.87■□□□□ 0.29
CCDC78-216ENST00000544996 CST3P01034 146 aaPredicted RBP16.87■□□□□ 0.29
CCDC78-216ENST00000544996 ATICP31939 592 aa16.87■□□□□ 0.29
CCDC78-216ENST00000544996 TNNC1P63316 161 aa16.87■□□□□ 0.29
CCDC78-216ENST00000544996 ADAM9Q13443 819 aa16.87■□□□□ 0.29
CCDC78-216ENST00000544996 SOWAHAQ2M3V2 549 aa16.87■□□□□ 0.29
CCDC78-216ENST00000544996 EDRF1Q3B7T1 1238 aa16.87■□□□□ 0.29
CCDC78-216ENST00000544996 MGAT5BQ3V5L5 792 aa16.87■□□□□ 0.29
CCDC78-216ENST00000544996 MTSS1LQ765P7 747 aa16.87■□□□□ 0.29
CCDC78-216ENST00000544996 ITIH5Q86UX2 942 aa16.87■□□□□ 0.29
CCDC78-216ENST00000544996 SMYD4Q8IYR2 804 aaPredicted RBP16.87■□□□□ 0.29
CCDC78-216ENST00000544996 SPATA20Q8TB22 786 aa16.87■□□□□ 0.29
CCDC78-216ENST00000544996 SPPL2BQ8TCT7 592 aa16.87■□□□□ 0.29
CCDC78-216ENST00000544996 TMC2Q8TDI7 906 aa16.87■□□□□ 0.29
CCDC78-216ENST00000544996 ZNF516Q92618 1163 aa16.87■□□□□ 0.29
CCDC78-216ENST00000544996 SYAP1Q96A49 352 aaPredicted RBP16.87■□□□□ 0.29
CCDC78-216ENST00000544996 SEPT5Q99719 369 aaPredicted RBP16.87■□□□□ 0.29
CCDC78-216ENST00000544996 GZF1Q9H116 711 aaPredicted RBP16.87■□□□□ 0.29
CCDC78-216ENST00000544996 CRISPLD1Q9H336 500 aa16.87■□□□□ 0.29
CCDC78-216ENST00000544996 ASAH2Q9NR71 780 aa16.87■□□□□ 0.29
CCDC78-216ENST00000544996 GDE1Q9NZC3 331 aa16.87■□□□□ 0.29
CCDC78-216ENST00000544996 CEP72Q9P209 647 aa16.87■□□□□ 0.29
CCDC78-216ENST00000544996 ASB3Q9Y575 518 aa16.87■□□□□ 0.29
CCDC78-216ENST00000544996 PCDHB5Q9Y5E4 795 aa16.87■□□□□ 0.29
CCDC78-216ENST00000544996 C2orf16Q68DN1 1984 aa16.87■□□□□ 0.29
CCDC78-216ENST00000544996 LRRIQ3A6PVS8 624 aaPredicted RBP16.86■□□□□ 0.29
CCDC78-216ENST00000544996 GABRDO14764 452 aa16.86■□□□□ 0.29
CCDC78-216ENST00000544996 IKBKBO14920 756 aa16.86■□□□□ 0.29
CCDC78-216ENST00000544996 GADD45BO75293 160 aaPredicted RBP16.86■□□□□ 0.29
CCDC78-216ENST00000544996 MICAL2O94851 1124 aa16.86■□□□□ 0.29
CCDC78-216ENST00000544996 KRT13P13646 458 aa16.86■□□□□ 0.29
CCDC78-216ENST00000544996 PSMC2P35998 433 aaKnown RBP16.86■□□□□ 0.29
CCDC78-216ENST00000544996 VEPH1Q14D04 833 aa16.86■□□□□ 0.29
CCDC78-216ENST00000544996 WDR72Q3MJ13 1102 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms