RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 FGF19O95750 216 aa12.71□□□□□ -0.37
HDAC4-216ENST00000544989 RHOP08100 348 aa12.71□□□□□ -0.37
HDAC4-216ENST00000544989 KRT19P08727 400 aa12.71□□□□□ -0.37
HDAC4-216ENST00000544989 TNNI1P19237 187 aa12.71□□□□□ -0.37
HDAC4-216ENST00000544989 LHX1P48742 406 aa12.71□□□□□ -0.37
HDAC4-216ENST00000544989 TUFMP49411 452 aaKnown RBP12.71□□□□□ -0.37
HDAC4-216ENST00000544989 EPHB3P54753 998 aa12.71□□□□□ -0.37
HDAC4-216ENST00000544989 MYL7Q01449 175 aa12.71□□□□□ -0.37
HDAC4-216ENST00000544989 CYP24A1Q07973 514 aa12.71□□□□□ -0.37
HDAC4-216ENST00000544989 DPYDQ12882 1025 aa12.71□□□□□ -0.37
HDAC4-216ENST00000544989 STK4Q13043 487 aa12.71□□□□□ -0.37
HDAC4-216ENST00000544989 NFE2Q16621 373 aaPredicted RBP12.71□□□□□ -0.37
HDAC4-216ENST00000544989 RNF19BQ6ZMZ0 732 aa12.71□□□□□ -0.37
HDAC4-216ENST00000544989 DPH6Q7L8W6 267 aa12.71□□□□□ -0.37
HDAC4-216ENST00000544989 ITIH5Q86UX2 942 aa12.71□□□□□ -0.37
HDAC4-216ENST00000544989 TOP6BLQ8N6T0 577 aa12.71□□□□□ -0.37
HDAC4-216ENST00000544989 ZSWIM2Q8NEG5 633 aa12.71□□□□□ -0.37
HDAC4-216ENST00000544989 SPPL2BQ8TCT7 592 aa12.71□□□□□ -0.37
HDAC4-216ENST00000544989 CGRRF1Q99675 332 aa12.71□□□□□ -0.37
HDAC4-216ENST00000544989 PRRX2Q99811 253 aa12.71□□□□□ -0.37
HDAC4-216ENST00000544989 ZCWPW1Q9H0M4 648 aa12.71□□□□□ -0.37
HDAC4-216ENST00000544989 RMND1Q9NWS8 449 aa12.71□□□□□ -0.37
HDAC4-216ENST00000544989 DNMT3BQ9UBC3 853 aaKnown RBP12.71□□□□□ -0.37
HDAC4-216ENST00000544989 DUSP12Q9UNI6 340 aa12.71□□□□□ -0.37
HDAC4-216ENST00000544989 MRPS23Q9Y3D9 190 aaKnown RBP12.71□□□□□ -0.37
HDAC4-216ENST00000544989 ANHXE9PGG2 379 aa12.7□□□□□ -0.38
HDAC4-216ENST00000544989 SEC24AO95486 1093 aa12.7□□□□□ -0.38
HDAC4-216ENST00000544989 ASGR2P07307 311 aa12.7□□□□□ -0.38
HDAC4-216ENST00000544989 FAM163BP0C2L3 166 aa12.7□□□□□ -0.38
HDAC4-216ENST00000544989 DLATP10515 647 aaKnown RBP12.7□□□□□ -0.38
HDAC4-216ENST00000544989 PCSK1P29120 753 aa12.7□□□□□ -0.38
HDAC4-216ENST00000544989 NUBP1P53384 320 aa12.7□□□□□ -0.38
HDAC4-216ENST00000544989 FAM160A1Q05DH4 1040 aa12.7□□□□□ -0.38
HDAC4-216ENST00000544989 TWF1Q12792 350 aa12.7□□□□□ -0.38
HDAC4-216ENST00000544989 BFSP1Q12934 665 aa12.7□□□□□ -0.38
HDAC4-216ENST00000544989 WSCD1Q658N2 575 aa12.7□□□□□ -0.38
HDAC4-216ENST00000544989 CENPPQ6IPU0 288 aa12.7□□□□□ -0.38
HDAC4-216ENST00000544989 HFE2Q6ZVN8 426 aa12.7□□□□□ -0.38
HDAC4-216ENST00000544989 PDZD4Q76G19 769 aaPredicted RBP12.7□□□□□ -0.38
HDAC4-216ENST00000544989 FBXL6Q8N531 539 aa12.7□□□□□ -0.38
HDAC4-216ENST00000544989 RDH13Q8NBN7 331 aa12.7□□□□□ -0.38
HDAC4-216ENST00000544989 KIAA0895Q8NCT3 520 aa12.7□□□□□ -0.38
HDAC4-216ENST00000544989 FGF13Q92913 245 aa12.7□□□□□ -0.38
HDAC4-216ENST00000544989 ASIC4Q96FT7 647 aa12.7□□□□□ -0.38
HDAC4-216ENST00000544989 BORCS6Q96GS4 357 aa12.7□□□□□ -0.38
HDAC4-216ENST00000544989 ACBD6Q9BR61 282 aa12.7□□□□□ -0.38
HDAC4-216ENST00000544989 GPR88Q9GZN0 384 aa12.7□□□□□ -0.38
HDAC4-216ENST00000544989 GDPD2Q9HCC8 539 aa12.7□□□□□ -0.38
HDAC4-216ENST00000544989 ASAH2Q9NR71 780 aa12.7□□□□□ -0.38
HDAC4-216ENST00000544989 FRMD4BQ9Y2L6 1034 aa12.7□□□□□ -0.38
HDAC4-216ENST00000544989 YIPF1Q9Y548 306 aa12.7□□□□□ -0.38
HDAC4-216ENST00000544989 SCN1AP35498 2009 aa12.7□□□□□ -0.38
HDAC4-216ENST00000544989 MTMR11A4FU01 709 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 MAPK13O15264 365 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 SMC2O95347 1197 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 SRFP11831 508 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 RPL13P26373 211 aaKnown RBP12.69□□□□□ -0.38
HDAC4-216ENST00000544989 ATICP31939 592 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 EPHA5P54756 1037 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 WNT7BP56706 349 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 ENPEPQ07075 957 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 DUSP4Q13115 394 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 TRPC3Q13507 836 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 HTR4Q13639 388 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 VEPH1Q14D04 833 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 NFIL3Q16649 462 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 SLC39A12Q504Y0 691 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 TRAPPC11Q7Z392 1133 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 ELOA2Q8IYF1 753 aaPredicted RBP12.69□□□□□ -0.38
HDAC4-216ENST00000544989 FMR1NBQ8N0W7 255 aaPredicted RBP12.69□□□□□ -0.38
HDAC4-216ENST00000544989 TMEM130Q8N3G9 435 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 GUF1Q8N442 669 aaKnown RBP12.69□□□□□ -0.38
HDAC4-216ENST00000544989 PDCL2Q8N4E4 241 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 CXorf38Q8TB03 319 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 FEZF2Q8TBJ5 459 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 HPDLQ96IR7 371 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 CHAMP1Q96JM3 812 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 TIGD1Q96MW7 591 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 GSDMAQ96QA5 445 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 CORO1BQ9BR76 489 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 KCTD10Q9H3F6 313 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 GOLPH3LQ9H4A5 285 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 ABCB6Q9NP58 842 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 DMAC2Q9NW81 257 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 WNT16Q9UBV4 365 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 SIX4Q9UIU6 781 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 ZMYM5Q9UJ78 669 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 FBXL21Q9UKT6 434 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 TRAF3IP3Q9Y228 551 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 SNX9Q9Y5X1 595 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 DOCK8Q8NF50 2099 aa12.69□□□□□ -0.38
HDAC4-216ENST00000544989 FAM186AA6NE01 2351 aa12.68□□□□□ -0.38
HDAC4-216ENST00000544989 STAU1O95793 577 aaKnown RBP12.68□□□□□ -0.38
HDAC4-216ENST00000544989 NR3C1P04150 777 aa12.68□□□□□ -0.38
HDAC4-216ENST00000544989 OR4Q2P0C623 313 aa12.68□□□□□ -0.38
HDAC4-216ENST00000544989 NTHL1P78549 312 aa12.68□□□□□ -0.38
HDAC4-216ENST00000544989 MAPRE1Q15691 268 aaKnown RBP12.68□□□□□ -0.38
HDAC4-216ENST00000544989 NPAS3Q8IXF0 933 aa12.68□□□□□ -0.38
HDAC4-216ENST00000544989 ADGRF2Q8IZF7 708 aa12.68□□□□□ -0.38
HDAC4-216ENST00000544989 SLC44A3Q8N4M1 653 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms