RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 DIABLOQ9NR28 239 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 SPASTQ9UBP0 616 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 FBXO40Q9UH90 709 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 A0A1B0GTH6 734 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 F5H6K3 240 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 IRAK1P51617 712 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 COPAP53621 1224 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 KLRC3Q07444 240 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 TRIM71Q2Q1W2 868 aaKnown RBP16.11■□□□□ 0.17
CHD4-210ENST00000544040 EYA4O95677 639 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 POLBP06746 335 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 UCHL3P15374 230 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 RFX3P48380 749 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 ARL4DP49703 201 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 SLC29A2Q14542 456 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 OTOAQ7RTW8 1153 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 LRRC34Q8IZ02 419 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 C10orf53Q8N6V4 93 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 OSBPL8Q9BZF1 889 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 IMPAD1Q9NX62 359 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 NCF1BA6NI72 391 aaPredicted RBP16.11■□□□□ 0.17
CHD4-210ENST00000544040 NCF1CA8MVU1 366 aaPredicted RBP16.11■□□□□ 0.17
CHD4-210ENST00000544040 PSMD3O43242 534 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 SRGNP10124 158 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 NCF1P14598 390 aaPredicted RBP16.11■□□□□ 0.17
CHD4-210ENST00000544040 FMO5P49326 533 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 NUMBP49757 651 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 AP3M2P53677 418 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 C1orf131Q8NDD1 294 aaKnown RBP16.11■□□□□ 0.17
CHD4-210ENST00000544040 SLC7A14Q8TBB6 771 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 ANKRD49Q8WVL7 239 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 ZDHHC9Q9Y397 364 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 IGSF1Q8N6C5 1336 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 PDXKO00764 312 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 SLC16A3O15427 465 aaKnown RBP16.11■□□□□ 0.17
CHD4-210ENST00000544040 ZNF23P17027 643 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 TMEM62Q0P6H9 643 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 CCDC149Q6ZUS6 474 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 ARID3BQ8IVW6 561 aaPredicted RBP16.11■□□□□ 0.17
CHD4-210ENST00000544040 KIRREL3Q8IZU9 778 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 MPP6Q9NZW5 540 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 MAGEA13PA6NCF6 341 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 RHOBTB1O94844 696 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 CYBBP04839 570 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 UGP2Q16851 508 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 ZCWPW2Q504Y3 356 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 VN1R5Q7Z5H4 357 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 OR8H2Q8N162 312 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 FAM111AQ96PZ2 611 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 REEP2Q9BRK0 252 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 MINPP1Q9UNW1 487 aa16.11■□□□□ 0.17
CHD4-210ENST00000544040 H7C1W4 665 aa16.1■□□□□ 0.17
CHD4-210ENST00000544040 UBXN8O00124 270 aa16.1■□□□□ 0.17
CHD4-210ENST00000544040 NCOA4Q13772 614 aa16.1■□□□□ 0.17
CHD4-210ENST00000544040 RAD9BQ6WBX8 426 aa16.1■□□□□ 0.17
CHD4-210ENST00000544040 TTC39CQ8N584 583 aa16.1■□□□□ 0.17
CHD4-210ENST00000544040 SRBD1Q8N5C6 995 aaKnown RBP16.1■□□□□ 0.17
CHD4-210ENST00000544040 GRID1Q9ULK0 1009 aa16.1■□□□□ 0.17
CHD4-210ENST00000544040 CCDC33Q8N5R6 958 aa16.1■□□□□ 0.17
CHD4-210ENST00000544040 METTL5Q9NRN9 209 aaKnown RBP16.1■□□□□ 0.17
CHD4-210ENST00000544040 MAP3K20Q9NYL2 800 aaKnown RBP16.1■□□□□ 0.17
CHD4-210ENST00000544040 UVRAGQ9P2Y5 699 aa16.1■□□□□ 0.17
CHD4-210ENST00000544040 EVPLLA8MZ36 301 aa16.1■□□□□ 0.17
CHD4-210ENST00000544040 PYGMP11217 842 aa16.1■□□□□ 0.17
CHD4-210ENST00000544040 TP53BP2Q13625 1128 aa16.1■□□□□ 0.17
CHD4-210ENST00000544040 PIGHQ14442 188 aaPredicted RBP16.1■□□□□ 0.17
CHD4-210ENST00000544040 GALNTL6Q49A17 601 aa16.1■□□□□ 0.17
CHD4-210ENST00000544040 FAXCQ5TGI0 409 aa16.1■□□□□ 0.17
CHD4-210ENST00000544040 GJB7Q6PEY0 223 aa16.1■□□□□ 0.17
CHD4-210ENST00000544040 SLC44A2Q8IWA5 706 aaPredicted RBP16.1■□□□□ 0.17
CHD4-210ENST00000544040 TNIP2Q8NFZ5 429 aa16.1■□□□□ 0.17
CHD4-210ENST00000544040 JADE3Q92613 823 aa16.1■□□□□ 0.17
CHD4-210ENST00000544040 NMD3Q96D46 503 aaKnown RBP16.1■□□□□ 0.17
CHD4-210ENST00000544040 POU4F1Q01851 419 aa16.1■□□□□ 0.17
CHD4-210ENST00000544040 TLK2Q86UE8 772 aa16.1■□□□□ 0.17
CHD4-210ENST00000544040 RARBP10826 455 aa16.1■□□□□ 0.17
CHD4-210ENST00000544040 ZC2HC1CQ53FD0 456 aaPredicted RBP16.1■□□□□ 0.17
CHD4-210ENST00000544040 DDX50Q9BQ39 737 aaKnown RBP16.1■□□□□ 0.17
CHD4-210ENST00000544040 FAM129AQ9BZQ8 928 aa16.1■□□□□ 0.17
CHD4-210ENST00000544040 PCDHA10Q9Y5I2 948 aa16.1■□□□□ 0.17
CHD4-210ENST00000544040 CDY2AQ9Y6F7 541 aa16.1■□□□□ 0.17
CHD4-210ENST00000544040 CDY1Q9Y6F8 540 aa16.1■□□□□ 0.17
CHD4-210ENST00000544040 SHANK2Q9UPX8 1470 aa16.1■□□□□ 0.17
CHD4-210ENST00000544040 PSMA4P25789 261 aaKnown RBP16.09■□□□□ 0.17
CHD4-210ENST00000544040 RPS7P62081 194 aaKnown RBP16.09■□□□□ 0.17
CHD4-210ENST00000544040 ARHGEF7Q14155 803 aa16.09■□□□□ 0.17
CHD4-210ENST00000544040 CYB5D1Q6P9G0 228 aa16.09■□□□□ 0.17
CHD4-210ENST00000544040 CENPTQ96BT3 561 aa16.09■□□□□ 0.17
CHD4-210ENST00000544040 OTUD5Q96G74 571 aa16.09■□□□□ 0.17
CHD4-210ENST00000544040 SEPT5Q99719 369 aaPredicted RBP16.09■□□□□ 0.17
CHD4-210ENST00000544040 PI4K2AQ9BTU6 479 aa16.09■□□□□ 0.17
CHD4-210ENST00000544040 AP3B1O00203 1094 aa16.09■□□□□ 0.17
CHD4-210ENST00000544040 GEMIN4P57678 1058 aaKnown RBP16.09■□□□□ 0.17
CHD4-210ENST00000544040 KCNB1Q14721 858 aa16.09■□□□□ 0.17
CHD4-210ENST00000544040 NOA1Q8NC60 698 aaKnown RBP16.09■□□□□ 0.17
CHD4-210ENST00000544040 DNAJC5BQ9UF47 199 aa16.09■□□□□ 0.17
CHD4-210ENST00000544040 PHTF1Q9UMS5 762 aa16.09■□□□□ 0.17
CHD4-210ENST00000544040 MROH7-TTC4A0A0A0MT08 1334 aa16.09■□□□□ 0.17
CHD4-210ENST00000544040 DPYDQ12882 1025 aa16.09■□□□□ 0.17
CHD4-210ENST00000544040 RTKN2Q8IZC4 609 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms