RNA–Protein interactions for RNA: ENST00000543695.5

LDHA-222, Transcript of lactate dehydrogenase A, human

TSL 5

Gene LDHA, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-222	ENST00000543695	CPSF3	Q9UKF6	684 aa	Known RBP	11.97	□□□□□ -0.49
LDHA-222	ENST00000543695	NUB1	Q9Y5A7	615 aa		11.97	□□□□□ -0.49
LDHA-222	ENST00000543695	NFS1	Q9Y697	457 aa		11.97	□□□□□ -0.49
LDHA-222	ENST00000543695	SCIN	Q9Y6U3	715 aa		11.97	□□□□□ -0.49
LDHA-222	ENST00000543695	SZT2	Q5T011	3432 aa		11.97	□□□□□ -0.49
LDHA-222	ENST00000543695	COL1A2	P08123	1366 aa		11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	ACKR2	O00590	384 aa		11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	PSTPIP1	O43586	416 aa		11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	ADAMTS4	O75173	837 aa		11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	LSM8	O95777	96 aa	Known RBP	11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	HARS	P12081	509 aa	Known RBP	11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	RRM1	P23921	792 aa		11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	EIF3B	P55884	814 aa	Known RBP	11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	YWHAE	P62258	255 aa	Known RBP	11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	TLE2	Q04725	743 aa		11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	POU5F1B	Q06416	359 aa		11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	DRP2	Q13474	957 aa		11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	HSDL1	Q3SXM5	330 aa		11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	ZNF484	Q5JVG2	852 aa		11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	PLEKHA7	Q6IQ23	1121 aa		11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	AADACL2	Q6P093	401 aa		11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	CCDC137	Q6PK04	289 aa	Known RBP	11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	TMEM270	Q6UE05	265 aa		11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	MPZL3	Q6UWV2	235 aa		11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	TSHZ1	Q6ZSZ6	1077 aa		11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	ARMCX2	Q7L311	632 aa		11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	ELMO3	Q96BJ8	720 aa		11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	CYFIP2	Q96F07	1278 aa		11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	FAXDC2	Q96IV6	333 aa		11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	FAM84A	Q96KN4	292 aa		11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	CAPS2	Q9BXY5	557 aa		11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	NFKBIZ	Q9BYH8	718 aa		11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	NIF3L1	Q9GZT8	377 aa		11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	FZD8	Q9H461	694 aa		11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	LRRC19	Q9H756	370 aa		11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	11.96	□□□□□ -0.49
LDHA-222	ENST00000543695	DNAH12	Q6ZR08	3092 aa		11.96	□□□□□ -0.5
LDHA-222	ENST00000543695	LAMA3	Q16787	3333 aa		11.96	□□□□□ -0.5
LDHA-222	ENST00000543695	UMODL1	Q5DID0	1318 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	RBM47	A0AV96	593 aa	Known RBP	11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	MOXD2P	A6NHM9	499 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	SRRM3	A6NNA2	597 aa	Predicted RBP	11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	MYO1F	O00160	1098 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	THAP12	O43422	761 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	B4GALT4	O60513	344 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	ABCB7	O75027	752 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	IL18RAP	O95256	599 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	CALCA	P01258	141 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	SRGAP2C	P0DJJ0	459 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	RARA	P10276	462 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	TXN	P10599	105 aa	Known RBP	11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	MARK3	P27448	753 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	TNFSF9	P41273	254 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	ACLY	P53396	1101 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	DHX9	Q08211	1270 aa	Known RBP	11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	KCNA10	Q16322	511 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	FAM187B	Q17R55	369 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	DUOXA2	Q1HG44	320 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	SGSM1	Q2NKQ1	1148 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	CEP85L	Q5SZL2	805 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	TTC27	Q6P3X3	843 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	ZDHHC24	Q6UX98	284 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	SYDE1	Q6ZW31	735 aa	Predicted RBP	11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	ADAT2	Q7Z6V5	191 aa	Known RBP	11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	ZBTB33	Q86T24	672 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	CPNE8	Q86YQ8	564 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	FBXO16	Q8IX29	292 aa	Predicted RBP	11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	ZDHHC14	Q8IZN3	488 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	ARFGAP2	Q8N6H7	521 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	PCSK9	Q8NBP7	692 aa	Known RBP	11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	RNF149	Q8NC42	400 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	KLHDC9	Q8NEP7	349 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	UBLCP1	Q8WVY7	318 aa	Predicted RBP	11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	CPA5	Q8WXQ8	436 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	LENG1	Q96BZ8	264 aa	Predicted RBP	11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	C18orf8	Q96DM3	657 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	TCHP	Q9BT92	498 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	PTPRH	Q9HD43	1115 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	STARD7	Q9NQZ5	370 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	PRMT7	Q9NVM4	692 aa	Predicted RBP	11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	GRHL1	Q9NZI5	618 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	ADAM22	Q9P0K1	906 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	CHORDC1	Q9UHD1	332 aa	Predicted RBP	11.95	□□□□□ -0.5
LDHA-222	ENST00000543695	TNFSF13B	Q9Y275	285 aa		11.95	□□□□□ -0.5
LDHA-222	ENST00000543695		A0A1W2PQ45	241 aa	Predicted RBP	11.94	□□□□□ -0.5
LDHA-222	ENST00000543695		A0A1W2PQY0	241 aa		11.94	□□□□□ -0.5
LDHA-222	ENST00000543695	FAM170A	A1A519	330 aa		11.94	□□□□□ -0.5
LDHA-222	ENST00000543695	TTLL13P	A6NNM8	815 aa		11.94	□□□□□ -0.5
LDHA-222	ENST00000543695	DCDC2C	A8MYV0	355 aa		11.94	□□□□□ -0.5
LDHA-222	ENST00000543695	EIF3H	O15372	352 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
LDHA-222	ENST00000543695	PPFIA4	O75335	1185 aa		11.94	□□□□□ -0.5
LDHA-222	ENST00000543695	KRT14	P02533	472 aa		11.94	□□□□□ -0.5
LDHA-222	ENST00000543695	TNNC2	P02585	160 aa		11.94	□□□□□ -0.5
LDHA-222	ENST00000543695	CALB1	P05937	261 aa		11.94	□□□□□ -0.5
LDHA-222	ENST00000543695	C6orf222	P0C671	652 aa	Predicted RBP	11.94	□□□□□ -0.5
LDHA-222	ENST00000543695	MYZAP	P0CAP1	466 aa		11.94	□□□□□ -0.5
LDHA-222	ENST00000543695	CDH5	P33151	784 aa	Predicted RBP	11.94	□□□□□ -0.5
LDHA-222	ENST00000543695	FLT3	P36888	993 aa		11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms