RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 KCNC4Q03721 635 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 GFPT1Q06210 699 aaPredicted RBP5.26□□□□□ -1.57
LIMS1-214ENST00000542845 FCHO2Q0JRZ9 810 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 MAPK6Q16659 721 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 LINC01559Q495D7 138 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 CCDC157Q569K6 752 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 XKR9Q5GH70 373 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 TMEM196Q5HYL7 178 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 GLRA4Q5JXX5 417 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 GPR158Q5T848 1215 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 TRIM68Q6AZZ1 485 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 ANO7Q6IWH7 933 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 PPP1R18Q6NYC8 613 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 RTL10Q7L3V2 364 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 LPCAT2Q7L5N7 544 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 FERMT3Q86UX7 667 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 NOSTRINQ8IVI9 506 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 MB21D2Q8IYB1 491 aaPredicted RBP5.26□□□□□ -1.57
LIMS1-214ENST00000542845 TCEAL8Q8IYN2 117 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 PGBD3Q8N328 593 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 FRMD1Q8N878 549 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 TSTD1Q8NFU3 115 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 TPCN2Q8NHX9 752 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 EXOC6Q8TAG9 804 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 BPIFB1Q8TDL5 484 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 TCP11Q8WWU5 503 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 CHFRQ96EP1 664 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 PNMA5Q96PV4 448 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 RIT2Q99578 217 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 GLT8D2Q9H1C3 349 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 ATXN3LQ9H3M9 355 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 EBF3Q9H4W6 596 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 CLMPQ9H6B4 373 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 GOLGA2P5Q9HBQ8 144 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 C6orf50Q9HD87 102 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 BARHL2Q9NY43 387 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 GDAQ9Y2T3 454 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 BACE2Q9Y5Z0 518 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 LOC400499M0QZD8 3231 aa5.26□□□□□ -1.57
LIMS1-214ENST00000542845 ZNF638Q14966 1978 aaKnown RBP5.25□□□□□ -1.57
LIMS1-214ENST00000542845 TRIP11Q15643 1979 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 CNTNAP5Q8WYK1 1306 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 TRABD2BA6NFA1 517 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 SOWAHDA6NJG2 315 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 H7C4K7 107 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 PTGESO14684 152 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 ZBTB39O15060 712 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 ITPKAP23677 461 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 MCM5P33992 734 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 PTGER3P43115 390 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 PTENP60484 403 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 PSMC5P62195 406 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 CLDN10P78369 228 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 CYP4F8P98187 520 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 CFHR1Q03591 330 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 ZNF211Q13398 564 aaPredicted RBP5.25□□□□□ -1.57
LIMS1-214ENST00000542845 RUNX3Q13761 415 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 TFDP1Q14186 410 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 EMC2Q15006 297 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 SWI5Q1ZZU3 235 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 CTXN3Q4LDR2 81 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 ARHGAP15Q53QZ3 475 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 C2orf27AQ580R0 203 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 NAIF1Q69YI7 327 aaPredicted RBP5.25□□□□□ -1.57
LIMS1-214ENST00000542845 MAEAQ7L5Y9 396 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 SYT13Q7L8C5 426 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 SLCO6A1Q86UG4 719 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 SYT12Q8IV01 421 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 EXOC8Q8IYI6 725 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 REXO1Q8N1G1 1221 aaKnown RBP5.25□□□□□ -1.57
LIMS1-214ENST00000542845 MINDY1Q8N5J2 469 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 CCDC33Q8N5R6 958 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 SETD7Q8WTS6 366 aaKnown RBP5.25□□□□□ -1.57
LIMS1-214ENST00000542845 CRYGNQ8WXF5 182 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 ADAMTS14Q8WXS8 1223 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 SLC5A5Q92911 643 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 LENG9Q96B70 501 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 CCDC51Q96ER9 411 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 PRIMPOLQ96LW4 560 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 PGLYRP2Q96PD5 576 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 MTRQ99707 1265 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 P2RY13Q9BPV8 354 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 BCCIPQ9P287 314 aaKnown RBP eCLIP5.25□□□□□ -1.57
LIMS1-214ENST00000542845 EBF1Q9UH73 591 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 EVLQ9UI08 416 aaPredicted RBP5.25□□□□□ -1.57
LIMS1-214ENST00000542845 SLC6A14Q9UN76 642 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 APOBEC2Q9Y235 224 aaKnown RBP5.25□□□□□ -1.57
LIMS1-214ENST00000542845 USP20Q9Y2K6 914 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 ARID2Q68CP9 1835 aa5.25□□□□□ -1.57
LIMS1-214ENST00000542845 PI4KAP42356 2102 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 NUP210Q8TEM1 1887 aaPredicted RBP5.24□□□□□ -1.57
LIMS1-214ENST00000542845 A0A1B0GUA9 196 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 FAM149AA5PLN7 773 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 OTOL1A6NHN0 477 aaPredicted RBP5.24□□□□□ -1.57
LIMS1-214ENST00000542845 LRRIQ4A6NIV6 560 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 hCG_1984214I3L0E3 225 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 EML1O00423 815 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 TRDMT1O14717 391 aaKnown RBP5.24□□□□□ -1.57
LIMS1-214ENST00000542845 MARCH6O60337 910 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 PSMD10O75832 226 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms