RNA–Protein interactions for RNA: ENST00000542661.1

DDX11-221, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-221ENST00000542661 VRTNQ9H8Y1 702 aa15.23■□□□□ 0.03
DDX11-221ENST00000542661 PRKAG3Q9UGI9 489 aa15.23■□□□□ 0.03
DDX11-221ENST00000542661 USP15Q9Y4E8 981 aaPredicted RBP15.23■□□□□ 0.03
DDX11-221ENST00000542661 WDR27A2RRH5 827 aa15.22■□□□□ 0.03
DDX11-221ENST00000542661 ZMYND10O75800 440 aa15.22■□□□□ 0.03
DDX11-221ENST00000542661 PAPLNO95428 1278 aa15.22■□□□□ 0.03
DDX11-221ENST00000542661 HNRNPA1P09651 372 aaKnown RBP eCLIP15.22■□□□□ 0.03
DDX11-221ENST00000542661 TRIM49P0CI25 452 aa15.22■□□□□ 0.03
DDX11-221ENST00000542661 TRIM49CP0CI26 452 aa15.22■□□□□ 0.03
DDX11-221ENST00000542661 P4HA1P13674 534 aa15.22■□□□□ 0.03
DDX11-221ENST00000542661 CPB1P15086 417 aa15.22■□□□□ 0.03
DDX11-221ENST00000542661 ATF2P15336 505 aa15.22■□□□□ 0.03
DDX11-221ENST00000542661 HOXA9P31269 272 aa15.22■□□□□ 0.03
DDX11-221ENST00000542661 LHX1P48742 406 aa15.22■□□□□ 0.03
DDX11-221ENST00000542661 NLRP12P59046 1061 aa15.22■□□□□ 0.03
DDX11-221ENST00000542661 MYL6P60660 151 aa15.22■□□□□ 0.03
DDX11-221ENST00000542661 TNNC1P63316 161 aa15.22■□□□□ 0.03
DDX11-221ENST00000542661 SMARCB1Q12824 385 aa15.22■□□□□ 0.03
DDX11-221ENST00000542661 GPR17Q13304 367 aa15.22■□□□□ 0.03
DDX11-221ENST00000542661 SGSM1Q2NKQ1 1148 aa15.22■□□□□ 0.03
DDX11-221ENST00000542661 ZNF699Q32M78 642 aa15.22■□□□□ 0.03
DDX11-221ENST00000542661 WDR72Q3MJ13 1102 aa15.22■□□□□ 0.03
DDX11-221ENST00000542661 CT47A1Q5JQC4 288 aaPredicted RBP15.22■□□□□ 0.03
DDX11-221ENST00000542661 CCDC183Q5T5S1 534 aa15.22■□□□□ 0.03
DDX11-221ENST00000542661 TMC5Q6UXY8 1006 aa15.22■□□□□ 0.03
DDX11-221ENST00000542661 RBM43Q6ZSC3 357 aaKnown RBP15.22■□□□□ 0.03
DDX11-221ENST00000542661 LIMS2Q7Z4I7 341 aa15.22■□□□□ 0.03
DDX11-221ENST00000542661 GPR149Q86SP6 731 aa15.22■□□□□ 0.03
DDX11-221ENST00000542661 TCEAL8Q8IYN2 117 aa15.22■□□□□ 0.03
DDX11-221ENST00000542661 ADGRF2Q8IZF7 708 aa15.22■□□□□ 0.03
DDX11-221ENST00000542661 C12orf76Q8N812 135 aaPredicted RBP15.22■□□□□ 0.03
DDX11-221ENST00000542661 SUSD6Q92537 303 aa15.22■□□□□ 0.03
DDX11-221ENST00000542661 IMPG2Q9BZV3 1241 aa15.22■□□□□ 0.03
DDX11-221ENST00000542661 XYLT2Q9H1B5 865 aa15.22■□□□□ 0.03
DDX11-221ENST00000542661 TMEM8AQ9HCN3 771 aa15.22■□□□□ 0.03
DDX11-221ENST00000542661 AFF4Q9UHB7 1163 aaKnown RBP15.22■□□□□ 0.03
DDX11-221ENST00000542661 L1RE1Q9UN81 338 aa15.22■□□□□ 0.03
DDX11-221ENST00000542661 CCDC195A0A1B0GUA6 201 aa15.21■□□□□ 0.03
DDX11-221ENST00000542661 PRRG1O14668 218 aa15.21■□□□□ 0.03
DDX11-221ENST00000542661 CLSTN1O94985 981 aa15.21■□□□□ 0.03
DDX11-221ENST00000542661 VNN1O95497 513 aa15.21■□□□□ 0.03
DDX11-221ENST00000542661 C8AP07357 584 aa15.21■□□□□ 0.03
DDX11-221ENST00000542661 PCSK1P29120 753 aa15.21■□□□□ 0.03
DDX11-221ENST00000542661 PIK3CAP42336 1068 aa15.21■□□□□ 0.03
DDX11-221ENST00000542661 GCLMP48507 274 aa15.21■□□□□ 0.03
DDX11-221ENST00000542661 STX17P56962 302 aa15.21■□□□□ 0.03
DDX11-221ENST00000542661 MYL7Q01449 175 aa15.21■□□□□ 0.03
DDX11-221ENST00000542661 TSPY1Q01534 308 aa15.21■□□□□ 0.03
DDX11-221ENST00000542661 CBX2Q14781 532 aaPredicted RBP15.21■□□□□ 0.03
DDX11-221ENST00000542661 SOWAHAQ2M3V2 549 aa15.21■□□□□ 0.03
DDX11-221ENST00000542661 CCDC40Q4G0X9 1142 aa15.21■□□□□ 0.03
DDX11-221ENST00000542661 PPM1LQ5SGD2 360 aa15.21■□□□□ 0.03
DDX11-221ENST00000542661 TCERG1LQ5VWI1 586 aa15.21■□□□□ 0.03
DDX11-221ENST00000542661 KRT39Q6A163 491 aa15.21■□□□□ 0.03
DDX11-221ENST00000542661 SCARA3Q6AZY7 606 aa15.21■□□□□ 0.03
DDX11-221ENST00000542661 DCP1BQ8IZD4 617 aaKnown RBP15.21■□□□□ 0.03
DDX11-221ENST00000542661 CCDC150Q8NCX0 1101 aa15.21■□□□□ 0.03
DDX11-221ENST00000542661 MMS19Q96T76 1030 aa15.21■□□□□ 0.03
DDX11-221ENST00000542661 ACBD6Q9BR61 282 aa15.21■□□□□ 0.03
DDX11-221ENST00000542661 APOL5Q9BWW9 433 aa15.21■□□□□ 0.03
DDX11-221ENST00000542661 PRKD2Q9BZL6 878 aa15.21■□□□□ 0.03
DDX11-221ENST00000542661 TSC2P49815 1807 aa15.21■□□□□ 0.03
DDX11-221ENST00000542661 GABRDO14764 452 aa15.2■□□□□ 0.02
DDX11-221ENST00000542661 XYLBO75191 536 aa15.2■□□□□ 0.02
DDX11-221ENST00000542661 TACC1O75410 805 aa15.2■□□□□ 0.02
DDX11-221ENST00000542661 RFPL2O75678 378 aa15.2■□□□□ 0.02
DDX11-221ENST00000542661 POU2F2P09086 479 aa15.2■□□□□ 0.02
DDX11-221ENST00000542661 ERCC5P28715 1186 aaPredicted RBP15.2■□□□□ 0.02
DDX11-221ENST00000542661 MXI1P50539 228 aa15.2■□□□□ 0.02
DDX11-221ENST00000542661 PPP3CAQ08209 521 aa15.2■□□□□ 0.02
DDX11-221ENST00000542661 DCAF17Q5H9S7 520 aaPredicted RBP15.2■□□□□ 0.02
DDX11-221ENST00000542661 ZNF667Q5HYK9 610 aa15.2■□□□□ 0.02
DDX11-221ENST00000542661 OR10T2Q8NGX3 314 aa15.2■□□□□ 0.02
DDX11-221ENST00000542661 SLC7A14Q8TBB6 771 aa15.2■□□□□ 0.02
DDX11-221ENST00000542661 ADAMTS19Q8TE59 1207 aa15.2■□□□□ 0.02
DDX11-221ENST00000542661 C2orf15Q8WU43 125 aaKnown RBP15.2■□□□□ 0.02
DDX11-221ENST00000542661 RTP3Q9BQQ7 232 aa15.2■□□□□ 0.02
DDX11-221ENST00000542661 SRRTQ9BXP5 876 aaKnown RBP15.2■□□□□ 0.02
DDX11-221ENST00000542661 ZCWPW1Q9H0M4 648 aa15.2■□□□□ 0.02
DDX11-221ENST00000542661 CYP4F11Q9HBI6 524 aa15.2■□□□□ 0.02
DDX11-221ENST00000542661 DDX43Q9NXZ2 648 aaKnown RBP15.2■□□□□ 0.02
DDX11-221ENST00000542661 NXF1Q9UBU9 619 aaKnown RBP15.2■□□□□ 0.02
DDX11-221ENST00000542661 ASS1P00966 412 aaKnown RBP15.19■□□□□ 0.02
DDX11-221ENST00000542661 HLA-DRAP01903 254 aa15.19■□□□□ 0.02
DDX11-221ENST00000542661 CCDC192P0DO97 292 aa15.19■□□□□ 0.02
DDX11-221ENST00000542661 IL9P15248 144 aa15.19■□□□□ 0.02
DDX11-221ENST00000542661 WARSP23381 471 aaKnown RBP15.19■□□□□ 0.02
DDX11-221ENST00000542661 ADCY1Q08828 1119 aa15.19■□□□□ 0.02
DDX11-221ENST00000542661 NFE2Q16621 373 aaPredicted RBP15.19■□□□□ 0.02
DDX11-221ENST00000542661 TPD52L1Q16890 204 aaPredicted RBP15.19■□□□□ 0.02
DDX11-221ENST00000542661 DPCR1Q3MIW9 517 aa15.19■□□□□ 0.02
DDX11-221ENST00000542661 SLC39A12Q504Y0 691 aa15.19■□□□□ 0.02
DDX11-221ENST00000542661 SASS6Q6UVJ0 657 aa15.19■□□□□ 0.02
DDX11-221ENST00000542661 RNF19BQ6ZMZ0 732 aa15.19■□□□□ 0.02
DDX11-221ENST00000542661 ADHFE1Q8IWW8 467 aa15.19■□□□□ 0.02
DDX11-221ENST00000542661 FBXL13Q8NEE6 735 aa15.19■□□□□ 0.02
DDX11-221ENST00000542661 SMG7Q92540 1137 aaKnown RBP15.19■□□□□ 0.02
DDX11-221ENST00000542661 PHF7Q9BWX1 381 aaPredicted RBP15.19■□□□□ 0.02
DDX11-221ENST00000542661 SNX25Q9H3E2 840 aa15.19■□□□□ 0.02
DDX11-221ENST00000542661 MMRN2Q9H8L6 949 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms