RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 DOK3Q7L591 496 aa5.38□□□□□ -1.55
MDM2-228ENST00000542502 ADGRG3Q86Y34 549 aa5.38□□□□□ -1.55
MDM2-228ENST00000542502 ANKRD18AQ8IVF6 992 aa5.38□□□□□ -1.55
MDM2-228ENST00000542502 ITPRIPQ8IWB1 547 aa5.38□□□□□ -1.55
MDM2-228ENST00000542502 GRAPLQ8TC17 118 aaPredicted RBP5.38□□□□□ -1.55
MDM2-228ENST00000542502 ZNF622Q969S3 477 aaKnown RBP eCLIP5.38□□□□□ -1.55
MDM2-228ENST00000542502 IL17RAQ96F46 866 aa5.38□□□□□ -1.55
MDM2-228ENST00000542502 BBC3Q96PG8 261 aaPredicted RBP5.38□□□□□ -1.55
MDM2-228ENST00000542502 MPHOSPH8Q99549 860 aa5.38□□□□□ -1.55
MDM2-228ENST00000542502 LSM14BQ9BX40 385 aaKnown RBP5.38□□□□□ -1.55
MDM2-228ENST00000542502 ANKRD2Q9GZV1 360 aa5.38□□□□□ -1.55
MDM2-228ENST00000542502 USP44Q9H0E7 712 aa5.38□□□□□ -1.55
MDM2-228ENST00000542502 ZMAT4Q9H898 229 aa5.38□□□□□ -1.55
MDM2-228ENST00000542502 PCDHB6Q9Y5E3 794 aa5.38□□□□□ -1.55
MDM2-228ENST00000542502 ARFGEF1Q9Y6D6 1849 aa5.38□□□□□ -1.55
MDM2-228ENST00000542502 MYPNQ86TC9 1320 aa5.38□□□□□ -1.55
MDM2-228ENST00000542502 BRCA1P38398 1863 aaKnown RBP5.37□□□□□ -1.55
MDM2-228ENST00000542502 ANKRD31Q8N7Z5 1873 aa5.37□□□□□ -1.55
MDM2-228ENST00000542502 A0A0G2JLW4 131 aa5.37□□□□□ -1.55
MDM2-228ENST00000542502 TMEM200CA6NKL6 621 aa5.37□□□□□ -1.55
MDM2-228ENST00000542502 LPXNO60711 386 aa5.37□□□□□ -1.55
MDM2-228ENST00000542502 LY86O95711 162 aa5.37□□□□□ -1.55
MDM2-228ENST00000542502 DPEP1P16444 411 aa5.37□□□□□ -1.55
MDM2-228ENST00000542502 APOBEC3AP31941 199 aaPredicted RBP5.37□□□□□ -1.55
MDM2-228ENST00000542502 USP14P54578 494 aa5.37□□□□□ -1.55
MDM2-228ENST00000542502 RRP1P56182 461 aaKnown RBP5.37□□□□□ -1.55
MDM2-228ENST00000542502 MTX1Q13505 466 aa5.37□□□□□ -1.55
MDM2-228ENST00000542502 GPR162Q16538 588 aa5.37□□□□□ -1.55
MDM2-228ENST00000542502 RABL6Q3YEC7 729 aaPredicted RBP5.37□□□□□ -1.55
MDM2-228ENST00000542502 CFAP100Q494V2 611 aa5.37□□□□□ -1.55
MDM2-228ENST00000542502 CCDC93Q567U6 631 aa5.37□□□□□ -1.55
MDM2-228ENST00000542502 STRIP1Q5VSL9 837 aa5.37□□□□□ -1.55
MDM2-228ENST00000542502 RPAP2Q8IXW5 612 aaPredicted RBP5.37□□□□□ -1.55
MDM2-228ENST00000542502 LILRA3Q8N6C8 439 aaPredicted RBP5.37□□□□□ -1.55
MDM2-228ENST00000542502 CDYL2Q8N8U2 506 aa5.37□□□□□ -1.55
MDM2-228ENST00000542502 DCLRE1CQ96SD1 692 aaKnown RBP5.37□□□□□ -1.55
MDM2-228ENST00000542502 ORAI3Q9BRQ5 295 aa5.37□□□□□ -1.55
MDM2-228ENST00000542502 SERHL2Q9H4I8 314 aa5.37□□□□□ -1.55
MDM2-228ENST00000542502 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.37□□□□□ -1.55
MDM2-228ENST00000542502 DDX60Q8IY21 1712 aaKnown RBP5.37□□□□□ -1.55
MDM2-228ENST00000542502 KIAA0355O15063 1070 aa5.36□□□□□ -1.55
MDM2-228ENST00000542502 NBPF7P0C2Y1 421 aaPredicted RBP5.36□□□□□ -1.55
MDM2-228ENST00000542502 ATP2A2P16615 1042 aaKnown RBP5.36□□□□□ -1.55
MDM2-228ENST00000542502 SDSP20132 328 aa5.36□□□□□ -1.55
MDM2-228ENST00000542502 KCNA3P22001 575 aa5.36□□□□□ -1.55
MDM2-228ENST00000542502 CD40P25942 277 aa5.36□□□□□ -1.55
MDM2-228ENST00000542502 GZMKP49863 264 aa5.36□□□□□ -1.55
MDM2-228ENST00000542502 MMP14P50281 582 aa5.36□□□□□ -1.55
MDM2-228ENST00000542502 C21orf58P58505 322 aa5.36□□□□□ -1.55
MDM2-228ENST00000542502 LRRC32Q14392 662 aa5.36□□□□□ -1.55
MDM2-228ENST00000542502 LRCH2Q5VUJ6 765 aa5.36□□□□□ -1.55
MDM2-228ENST00000542502 SYCE2Q6PIF2 218 aa5.36□□□□□ -1.55
MDM2-228ENST00000542502 LMBR1LQ6UX01 489 aa5.36□□□□□ -1.55
MDM2-228ENST00000542502 LDHAL6AQ6ZMR3 332 aa5.36□□□□□ -1.55
MDM2-228ENST00000542502 GDF7Q7Z4P5 450 aa5.36□□□□□ -1.55
MDM2-228ENST00000542502 ERC1Q8IUD2 1116 aa5.36□□□□□ -1.55
MDM2-228ENST00000542502 TMEM57Q8N5G2 664 aa5.36□□□□□ -1.55
MDM2-228ENST00000542502 PSMD1Q99460 953 aa5.36□□□□□ -1.55
MDM2-228ENST00000542502 EYA3Q99504 573 aa5.36□□□□□ -1.55
MDM2-228ENST00000542502 SLKQ9H2G2 1235 aaPredicted RBP5.36□□□□□ -1.55
MDM2-228ENST00000542502 TRPM5Q9NZQ8 1165 aa5.36□□□□□ -1.55
MDM2-228ENST00000542502 ZKSCAN5Q9Y2L8 839 aa5.36□□□□□ -1.55
MDM2-228ENST00000542502 PRKAB1Q9Y478 270 aa5.36□□□□□ -1.55
MDM2-228ENST00000542502 ATP6V0A2Q9Y487 856 aa5.36□□□□□ -1.55
MDM2-228ENST00000542502 MROH5Q6ZUA9 1318 aa5.36□□□□□ -1.55
MDM2-228ENST00000542502 ABCC12Q96J65 1359 aa5.35□□□□□ -1.55
MDM2-228ENST00000542502 GAGE12BA1L429 117 aa5.35□□□□□ -1.55
MDM2-228ENST00000542502 GAGE12HA6NDE8 117 aa5.35□□□□□ -1.55
MDM2-228ENST00000542502 RNASET2O00584 256 aaKnown RBP5.35□□□□□ -1.55
MDM2-228ENST00000542502 CIAO1O76071 339 aa5.35□□□□□ -1.55
MDM2-228ENST00000542502 SEC24DO94855 1032 aaPredicted RBP5.35□□□□□ -1.55
MDM2-228ENST00000542502 IL15P40933 162 aaPredicted RBP5.35□□□□□ -1.55
MDM2-228ENST00000542502 C21orf62-AS1Q17RA5 79 aa5.35□□□□□ -1.55
MDM2-228ENST00000542502 RNF187Q5TA31 235 aaPredicted RBP5.35□□□□□ -1.55
MDM2-228ENST00000542502 TAS1R1Q7RTX1 841 aa5.35□□□□□ -1.55
MDM2-228ENST00000542502 ARHGEF19Q8IW93 802 aa5.35□□□□□ -1.55
MDM2-228ENST00000542502 GPATCH3Q96I76 525 aa5.35□□□□□ -1.55
MDM2-228ENST00000542502 WDR11Q9BZH6 1224 aa5.35□□□□□ -1.55
MDM2-228ENST00000542502 BICC1Q9H694 974 aaKnown RBP5.35□□□□□ -1.55
MDM2-228ENST00000542502 AKIP1Q9NQ31 210 aa5.35□□□□□ -1.55
MDM2-228ENST00000542502 CNNM1Q9NRU3 951 aa5.35□□□□□ -1.55
MDM2-228ENST00000542502 ADARB2Q9NS39 739 aaKnown RBP5.35□□□□□ -1.55
MDM2-228ENST00000542502 ZBTB40Q9NUA8 1239 aa5.35□□□□□ -1.55
MDM2-228ENST00000542502 H2AFY2Q9P0M6 372 aaPredicted RBP5.35□□□□□ -1.55
MDM2-228ENST00000542502 USP36Q9P275 1121 aaKnown RBP5.35□□□□□ -1.55
MDM2-228ENST00000542502 ANKFY1Q9P2R3 1169 aa5.35□□□□□ -1.55
MDM2-228ENST00000542502 CLCA2Q9UQC9 943 aa5.35□□□□□ -1.55
MDM2-228ENST00000542502 PLAAQ9Y263 795 aa5.35□□□□□ -1.55
MDM2-228ENST00000542502 CHST2Q9Y4C5 530 aa5.35□□□□□ -1.55
MDM2-228ENST00000542502 CHD4Q14839 1912 aa5.35□□□□□ -1.55
MDM2-228ENST00000542502 KIAA1551Q9HCM1 1747 aa5.34□□□□□ -1.55
MDM2-228ENST00000542502 RAB11FIP3O75154 756 aa5.34□□□□□ -1.55
MDM2-228ENST00000542502 RFPL3O75679 317 aa5.34□□□□□ -1.55
MDM2-228ENST00000542502 NCR1O76036 304 aa5.34□□□□□ -1.55
MDM2-228ENST00000542502 PFKMP08237 780 aa5.34□□□□□ -1.55
MDM2-228ENST00000542502 CHRNA5P30532 468 aa5.34□□□□□ -1.55
MDM2-228ENST00000542502 KCNJ4P48050 445 aa5.34□□□□□ -1.55
MDM2-228ENST00000542502 MASP1P48740 699 aa5.34□□□□□ -1.55
MDM2-228ENST00000542502 CLK3P49761 638 aaKnown RBP5.34□□□□□ -1.55
MDM2-228ENST00000542502 ATP8B2P98198 1209 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms