RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 DNMT3BQ9UBC3 853 aaKnown RBP21.59■■□□□ 1.05
CACNA2D4-215ENST00000542340 HSFX1Q9UBD0 423 aa21.59■■□□□ 1.05
CACNA2D4-215ENST00000542340 L1RE1Q9UN81 338 aa21.59■■□□□ 1.05
CACNA2D4-215ENST00000542340 MAPK13O15264 365 aa21.58■■□□□ 1.05
CACNA2D4-215ENST00000542340 GPR37L1O60883 481 aa21.58■■□□□ 1.05
CACNA2D4-215ENST00000542340 VNN2O95498 520 aa21.58■■□□□ 1.05
CACNA2D4-215ENST00000542340 CST3P01034 146 aaPredicted RBP21.58■■□□□ 1.05
CACNA2D4-215ENST00000542340 PTPN2P17706 415 aa21.58■■□□□ 1.05
CACNA2D4-215ENST00000542340 NR2F2P24468 414 aa21.58■■□□□ 1.05
CACNA2D4-215ENST00000542340 UBE2HP62256 183 aa21.58■■□□□ 1.05
CACNA2D4-215ENST00000542340 NTHL1P78549 312 aa21.58■■□□□ 1.05
CACNA2D4-215ENST00000542340 SMARCB1Q12824 385 aa21.58■■□□□ 1.05
CACNA2D4-215ENST00000542340 EDRF1Q3B7T1 1238 aa21.58■■□□□ 1.05
CACNA2D4-215ENST00000542340 PABPC1LQ4VXU2 614 aaKnown RBP21.58■■□□□ 1.05
CACNA2D4-215ENST00000542340 ZCWPW2Q504Y3 356 aa21.58■■□□□ 1.05
CACNA2D4-215ENST00000542340 CEP135Q66GS9 1140 aa21.58■■□□□ 1.05
CACNA2D4-215ENST00000542340 TMC2Q8TDI7 906 aa21.58■■□□□ 1.05
CACNA2D4-215ENST00000542340 ERCC4Q92889 916 aaPredicted RBP21.58■■□□□ 1.05
CACNA2D4-215ENST00000542340 MYADMQ96S97 322 aa21.58■■□□□ 1.05
CACNA2D4-215ENST00000542340 AVENQ9NQS1 362 aaPredicted RBP21.58■■□□□ 1.05
CACNA2D4-215ENST00000542340 HCFC1R1Q9NWW0 138 aa21.58■■□□□ 1.05
CACNA2D4-215ENST00000542340 EPS15L1Q9UBC2 864 aa21.58■■□□□ 1.05
CACNA2D4-215ENST00000542340 ZFP37Q9Y6Q3 630 aaPredicted RBP21.58■■□□□ 1.05
CACNA2D4-215ENST00000542340 TSC2P49815 1807 aa21.57■■□□□ 1.04
CACNA2D4-215ENST00000542340 MTMR11A4FU01 709 aa21.57■■□□□ 1.04
CACNA2D4-215ENST00000542340 LRRIQ3A6PVS8 624 aaPredicted RBP21.57■■□□□ 1.04
CACNA2D4-215ENST00000542340 PRCPP42785 496 aa21.57■■□□□ 1.04
CACNA2D4-215ENST00000542340 LHX1P48742 406 aa21.57■■□□□ 1.04
CACNA2D4-215ENST00000542340 ZXDAP98168 799 aa21.57■■□□□ 1.04
CACNA2D4-215ENST00000542340 DUSP4Q13115 394 aa21.57■■□□□ 1.04
CACNA2D4-215ENST00000542340 ADAM9Q13443 819 aa21.57■■□□□ 1.04
CACNA2D4-215ENST00000542340 SOWAHAQ2M3V2 549 aa21.57■■□□□ 1.04
CACNA2D4-215ENST00000542340 SLC39A12Q504Y0 691 aa21.57■■□□□ 1.04
CACNA2D4-215ENST00000542340 GET4Q7L5D6 327 aaPredicted RBP21.57■■□□□ 1.04
CACNA2D4-215ENST00000542340 LIMS2Q7Z4I7 341 aa21.57■■□□□ 1.04
CACNA2D4-215ENST00000542340 DCP1BQ8IZD4 617 aaKnown RBP21.57■■□□□ 1.04
CACNA2D4-215ENST00000542340 ATAD1Q8NBU5 361 aa21.57■■□□□ 1.04
CACNA2D4-215ENST00000542340 C2orf15Q8WU43 125 aaKnown RBP21.57■■□□□ 1.04
CACNA2D4-215ENST00000542340 ACBD6Q9BR61 282 aa21.57■■□□□ 1.04
CACNA2D4-215ENST00000542340 SORCS3Q9UPU3 1222 aa21.57■■□□□ 1.04
CACNA2D4-215ENST00000542340 GABRDO14764 452 aa21.56■■□□□ 1.04
CACNA2D4-215ENST00000542340 IKBKBO14920 756 aa21.56■■□□□ 1.04
CACNA2D4-215ENST00000542340 STAU1O95793 577 aaKnown RBP21.56■■□□□ 1.04
CACNA2D4-215ENST00000542340 RHOP08100 348 aa21.56■■□□□ 1.04
CACNA2D4-215ENST00000542340 LAMP2P13473 410 aa21.56■■□□□ 1.04
CACNA2D4-215ENST00000542340 MYL7Q01449 175 aa21.56■■□□□ 1.04
CACNA2D4-215ENST00000542340 TWF1Q12792 350 aa21.56■■□□□ 1.04
CACNA2D4-215ENST00000542340 PLD1Q13393 1074 aa21.56■■□□□ 1.04
CACNA2D4-215ENST00000542340 TRPC3Q13507 836 aa21.56■■□□□ 1.04
CACNA2D4-215ENST00000542340 TMEM31Q5JXX7 168 aa21.56■■□□□ 1.04
CACNA2D4-215ENST00000542340 ELMOD1Q8N336 334 aa21.56■■□□□ 1.04
CACNA2D4-215ENST00000542340 ZNF512Q96ME7 567 aaPredicted RBP21.56■■□□□ 1.04
CACNA2D4-215ENST00000542340 CRISPLD1Q9H336 500 aa21.56■■□□□ 1.04
CACNA2D4-215ENST00000542340 C11orf16Q9NQ32 467 aa21.56■■□□□ 1.04
CACNA2D4-215ENST00000542340 DDX43Q9NXZ2 648 aaKnown RBP21.56■■□□□ 1.04
CACNA2D4-215ENST00000542340 IGSF9Q9P2J2 1179 aa21.56■■□□□ 1.04
CACNA2D4-215ENST00000542340 YIPF1Q9Y548 306 aa21.56■■□□□ 1.04
CACNA2D4-215ENST00000542340 PHACTR2O75167 634 aa21.55■■□□□ 1.04
CACNA2D4-215ENST00000542340 AKAP3O75969 853 aa21.55■■□□□ 1.04
CACNA2D4-215ENST00000542340 C4BPAP04003 597 aaKnown RBP21.55■■□□□ 1.04
CACNA2D4-215ENST00000542340 ASGR2P07307 311 aa21.55■■□□□ 1.04
CACNA2D4-215ENST00000542340 FAM163BP0C2L3 166 aa21.55■■□□□ 1.04
CACNA2D4-215ENST00000542340 ATICP31939 592 aa21.55■■□□□ 1.04
CACNA2D4-215ENST00000542340 PSMC2P35998 433 aaKnown RBP21.55■■□□□ 1.04
CACNA2D4-215ENST00000542340 DLG4P78352 724 aa21.55■■□□□ 1.04
CACNA2D4-215ENST00000542340 TSPY1Q01534 308 aa21.55■■□□□ 1.04
CACNA2D4-215ENST00000542340 ENPEPQ07075 957 aa21.55■■□□□ 1.04
CACNA2D4-215ENST00000542340 IQCEQ6IPM2 695 aa21.55■■□□□ 1.04
CACNA2D4-215ENST00000542340 LRRTM3Q86VH5 581 aa21.55■■□□□ 1.04
CACNA2D4-215ENST00000542340 ADGRF2Q8IZF7 708 aa21.55■■□□□ 1.04
CACNA2D4-215ENST00000542340 ITFG1Q8TB96 612 aa21.55■■□□□ 1.04
CACNA2D4-215ENST00000542340 KCNK12Q9HB15 430 aa21.55■■□□□ 1.04
CACNA2D4-215ENST00000542340 CEP72Q9P209 647 aa21.55■■□□□ 1.04
CACNA2D4-215ENST00000542340 CDH7Q9ULB5 785 aa21.55■■□□□ 1.04
CACNA2D4-215ENST00000542340 SLC27A5Q9Y2P5 690 aa21.55■■□□□ 1.04
CACNA2D4-215ENST00000542340 TRIOO75962 3097 aa21.55■■□□□ 1.04
CACNA2D4-215ENST00000542340 DOCK6Q96HP0 2047 aa21.55■■□□□ 1.04
CACNA2D4-215ENST00000542340 PCSK1P29120 753 aa21.54■■□□□ 1.04
CACNA2D4-215ENST00000542340 ALDH1A3P47895 512 aa21.54■■□□□ 1.04
CACNA2D4-215ENST00000542340 TUFMP49411 452 aaKnown RBP21.54■■□□□ 1.04
CACNA2D4-215ENST00000542340 VAMP7P51809 220 aa21.54■■□□□ 1.04
CACNA2D4-215ENST00000542340 EPHB3P54753 998 aa21.54■■□□□ 1.04
CACNA2D4-215ENST00000542340 BIRC3Q13489 604 aa21.54■■□□□ 1.04
CACNA2D4-215ENST00000542340 MTMR3Q13615 1198 aa21.54■■□□□ 1.04
CACNA2D4-215ENST00000542340 TDRD10Q5VZ19 366 aaKnown RBP21.54■■□□□ 1.04
CACNA2D4-215ENST00000542340 INTS8Q75QN2 995 aaKnown RBP21.54■■□□□ 1.04
CACNA2D4-215ENST00000542340 FAM186BQ8IYM0 893 aa21.54■■□□□ 1.04
CACNA2D4-215ENST00000542340 UBALD2Q8IYN6 164 aa21.54■■□□□ 1.04
CACNA2D4-215ENST00000542340 ADSSL1Q8N142 457 aa21.54■■□□□ 1.04
CACNA2D4-215ENST00000542340 SPPL2BQ8TCT7 592 aa21.54■■□□□ 1.04
CACNA2D4-215ENST00000542340 FGF13Q92913 245 aa21.54■■□□□ 1.04
CACNA2D4-215ENST00000542340 NXPE3Q969Y0 559 aa21.54■■□□□ 1.04
CACNA2D4-215ENST00000542340 SYAP1Q96A49 352 aaPredicted RBP21.54■■□□□ 1.04
CACNA2D4-215ENST00000542340 CORO1BQ9BR76 489 aa21.54■■□□□ 1.04
CACNA2D4-215ENST00000542340 XYLT2Q9H1B5 865 aa21.54■■□□□ 1.04
CACNA2D4-215ENST00000542340 MRPS23Q9Y3D9 190 aaKnown RBP21.54■■□□□ 1.04
CACNA2D4-215ENST00000542340 MYO10Q9HD67 2058 aa21.53■■□□□ 1.04
CACNA2D4-215ENST00000542340 ZNF197O14709 1029 aa21.53■■□□□ 1.04
CACNA2D4-215ENST00000542340 MICAL2O94851 1124 aa21.53■■□□□ 1.04
CACNA2D4-215ENST00000542340 PPP1R2P41236 205 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms