RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 MAP2K6P52564 334 aa4.64□□□□□ -1.67
LEMD3-204ENST00000542032 C21orf58P58505 322 aa4.64□□□□□ -1.67
LEMD3-204ENST00000542032 GNAI1P63096 354 aa4.64□□□□□ -1.67
LEMD3-204ENST00000542032 IGBP1P78318 339 aa4.64□□□□□ -1.67
LEMD3-204ENST00000542032 FAM109AQ8N4B1 249 aa4.64□□□□□ -1.67
LEMD3-204ENST00000542032 NELL1Q92832 810 aa4.64□□□□□ -1.67
LEMD3-204ENST00000542032 RGMAQ96B86 450 aa4.64□□□□□ -1.67
LEMD3-204ENST00000542032 HSPBAP1Q96EW2 488 aa4.64□□□□□ -1.67
LEMD3-204ENST00000542032 PGBD1Q96JS3 809 aa4.64□□□□□ -1.67
LEMD3-204ENST00000542032 TIMP4Q99727 224 aa4.64□□□□□ -1.67
LEMD3-204ENST00000542032 SMOQ99835 787 aa4.64□□□□□ -1.67
LEMD3-204ENST00000542032 GTPBP4Q9BZE4 634 aaKnown RBP4.64□□□□□ -1.67
LEMD3-204ENST00000542032 MRPL46Q9H2W6 279 aaKnown RBP4.64□□□□□ -1.67
LEMD3-204ENST00000542032 MRPS18AQ9NVS2 196 aaKnown RBP4.64□□□□□ -1.67
LEMD3-204ENST00000542032 SLC17A6Q9P2U8 582 aa4.64□□□□□ -1.67
LEMD3-204ENST00000542032 AGAP1Q9UPQ3 857 aa4.64□□□□□ -1.67
LEMD3-204ENST00000542032 PCDHA3Q9Y5H8 950 aa4.64□□□□□ -1.67
LEMD3-204ENST00000542032 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.64□□□□□ -1.67
LEMD3-204ENST00000542032 CCDC151A5D8V7 595 aa4.63□□□□□ -1.67
LEMD3-204ENST00000542032 TOR1BO14657 336 aa4.63□□□□□ -1.67
LEMD3-204ENST00000542032 DTNBO60941 627 aa4.63□□□□□ -1.67
LEMD3-204ENST00000542032 ABLIM3O94929 683 aa4.63□□□□□ -1.67
LEMD3-204ENST00000542032 ONECUT2O95948 504 aa4.63□□□□□ -1.67
LEMD3-204ENST00000542032 ELFN1P0C7U0 828 aa4.63□□□□□ -1.67
LEMD3-204ENST00000542032 RARBP10826 455 aa4.63□□□□□ -1.67
LEMD3-204ENST00000542032 TYRP14679 529 aa4.63□□□□□ -1.67
LEMD3-204ENST00000542032 WT1P19544 449 aaPredicted RBP4.63□□□□□ -1.67
LEMD3-204ENST00000542032 NPTX2P47972 431 aa4.63□□□□□ -1.67
LEMD3-204ENST00000542032 MAPK10P53779 464 aa4.63□□□□□ -1.67
LEMD3-204ENST00000542032 NKX6-1P78426 367 aaPredicted RBP4.63□□□□□ -1.67
LEMD3-204ENST00000542032 TXNRD1Q16881 649 aa4.63□□□□□ -1.67
LEMD3-204ENST00000542032 PGS1Q32NB8 556 aa4.63□□□□□ -1.67
LEMD3-204ENST00000542032 ATAT1Q5SQI0 421 aa4.63□□□□□ -1.67
LEMD3-204ENST00000542032 TSHZ1Q6ZSZ6 1077 aa4.63□□□□□ -1.67
LEMD3-204ENST00000542032 CATIPQ7Z7H3 387 aa4.63□□□□□ -1.67
LEMD3-204ENST00000542032 ZBTB46Q86UZ6 589 aa4.63□□□□□ -1.67
LEMD3-204ENST00000542032 MYCBPAPQ8TBZ2 947 aa4.63□□□□□ -1.67
LEMD3-204ENST00000542032 STAG1Q8WVM7 1258 aa4.63□□□□□ -1.67
LEMD3-204ENST00000542032 FAM167AQ96KS9 214 aa4.63□□□□□ -1.67
LEMD3-204ENST00000542032 OSBPL9Q96SU4 736 aa4.63□□□□□ -1.67
LEMD3-204ENST00000542032 ABCF2Q9UG63 623 aa4.63□□□□□ -1.67
LEMD3-204ENST00000542032 LUC7L2Q9Y383 392 aaKnown RBP4.63□□□□□ -1.67
LEMD3-204ENST00000542032 ENTPD2Q9Y5L3 495 aa4.63□□□□□ -1.67
LEMD3-204ENST00000542032 SPATA31A6Q5VVP1 1343 aa4.63□□□□□ -1.67
LEMD3-204ENST00000542032 hCG_2014768A0A024R1R8 64 aa4.62□□□□□ -1.67
LEMD3-204ENST00000542032 ZNF785A8K8V0 405 aa4.62□□□□□ -1.67
LEMD3-204ENST00000542032 VWC2LB2RUY7 222 aa4.62□□□□□ -1.67
LEMD3-204ENST00000542032 ADM5C9JUS6 153 aa4.62□□□□□ -1.67
LEMD3-204ENST00000542032 POLRMTO00411 1230 aaKnown RBP4.62□□□□□ -1.67
LEMD3-204ENST00000542032 SOAT2O75908 522 aa4.62□□□□□ -1.67
LEMD3-204ENST00000542032 PARNO95453 639 aaKnown RBP4.62□□□□□ -1.67
LEMD3-204ENST00000542032 FTLP02792 175 aaPredicted RBP4.62□□□□□ -1.67
LEMD3-204ENST00000542032 VCAM1P19320 739 aa4.62□□□□□ -1.67
LEMD3-204ENST00000542032 SMARCA1P28370 1054 aa4.62□□□□□ -1.67
LEMD3-204ENST00000542032 CD38P28907 300 aa4.62□□□□□ -1.67
LEMD3-204ENST00000542032 GRIA3P42263 894 aa4.62□□□□□ -1.67
LEMD3-204ENST00000542032 NXPH1P58417 271 aa4.62□□□□□ -1.67
LEMD3-204ENST00000542032 PSMC1P62191 440 aaKnown RBP4.62□□□□□ -1.67
LEMD3-204ENST00000542032 ITIH3Q06033 890 aa4.62□□□□□ -1.67
LEMD3-204ENST00000542032 EMC10Q5UCC4 262 aa4.62□□□□□ -1.67
LEMD3-204ENST00000542032 HEATR3Q7Z4Q2 680 aa4.62□□□□□ -1.67
LEMD3-204ENST00000542032 PEG10Q86TG7 708 aaKnown RBP4.62□□□□□ -1.67
LEMD3-204ENST00000542032 PPP1R3BQ86XI6 285 aa4.62□□□□□ -1.67
LEMD3-204ENST00000542032 UROC1Q96N76 676 aa4.62□□□□□ -1.67
LEMD3-204ENST00000542032 CNPPD1Q9BV87 410 aa4.62□□□□□ -1.67
LEMD3-204ENST00000542032 KLK15Q9H2R5 256 aa4.62□□□□□ -1.67
LEMD3-204ENST00000542032 ARPP21Q9UBL0 812 aaPredicted RBP4.62□□□□□ -1.67
LEMD3-204ENST00000542032 LRRC3CA6NJW4 275 aa4.61□□□□□ -1.67
LEMD3-204ENST00000542032 MASP2O00187 686 aa4.61□□□□□ -1.67
LEMD3-204ENST00000542032 IBSPP21815 317 aaPredicted RBP4.61□□□□□ -1.67
LEMD3-204ENST00000542032 ITPKBP27987 946 aa4.61□□□□□ -1.67
LEMD3-204ENST00000542032 ZNF135P52742 658 aaPredicted RBP4.61□□□□□ -1.67
LEMD3-204ENST00000542032 MCL1Q07820 350 aa4.61□□□□□ -1.67
LEMD3-204ENST00000542032 KAZNQ674X7 775 aa4.61□□□□□ -1.67
LEMD3-204ENST00000542032 TAF2Q6P1X5 1199 aa4.61□□□□□ -1.67
LEMD3-204ENST00000542032 UBE2Q2Q8WVN8 375 aa4.61□□□□□ -1.67
LEMD3-204ENST00000542032 HPS3Q969F9 1004 aa4.61□□□□□ -1.67
LEMD3-204ENST00000542032 HOOK2Q96ED9 719 aa4.61□□□□□ -1.67
LEMD3-204ENST00000542032 MVB12AQ96EY5 273 aa4.61□□□□□ -1.67
LEMD3-204ENST00000542032 HEPHQ9BQS7 1158 aa4.61□□□□□ -1.67
LEMD3-204ENST00000542032 AMBRA1Q9C0C7 1298 aa4.61□□□□□ -1.67
LEMD3-204ENST00000542032 TINAGL1Q9GZM7 467 aaPredicted RBP4.61□□□□□ -1.67
LEMD3-204ENST00000542032 SIK2Q9H0K1 926 aa4.61□□□□□ -1.67
LEMD3-204ENST00000542032 SLC12A5Q9H2X9 1139 aa4.61□□□□□ -1.67
LEMD3-204ENST00000542032 SMOC2Q9H3U7 446 aa4.61□□□□□ -1.67
LEMD3-204ENST00000542032 KLC4Q9NSK0 619 aa4.61□□□□□ -1.67
LEMD3-204ENST00000542032 FEZ2Q9UHY8 353 aaPredicted RBP4.61□□□□□ -1.67
LEMD3-204ENST00000542032 ANKRD6Q9Y2G4 727 aa4.61□□□□□ -1.67
LEMD3-204ENST00000542032 ADGRA2Q96PE1 1338 aa4.61□□□□□ -1.67
LEMD3-204ENST00000542032 A0A0B4J269 797 aa4.6□□□□□ -1.67
LEMD3-204ENST00000542032 RBMXL2O75526 392 aaKnown RBP4.6□□□□□ -1.67
LEMD3-204ENST00000542032 IL33O95760 270 aa4.6□□□□□ -1.67
LEMD3-204ENST00000542032 C1RP00736 705 aa4.6□□□□□ -1.67
LEMD3-204ENST00000542032 NDUFV1P49821 464 aa4.6□□□□□ -1.67
LEMD3-204ENST00000542032 TUBB3Q13509 450 aa4.6□□□□□ -1.67
LEMD3-204ENST00000542032 BOP1Q14137 746 aaKnown RBP4.6□□□□□ -1.67
LEMD3-204ENST00000542032 PREPLQ4J6C6 727 aaPredicted RBP4.6□□□□□ -1.67
LEMD3-204ENST00000542032 KRTAP5-1Q6L8H4 278 aa4.6□□□□□ -1.67
LEMD3-204ENST00000542032 SLC30A10Q6XR72 485 aa4.6□□□□□ -1.67
LEMD3-204ENST00000542032 GRASPQ7Z6J2 395 aaPredicted RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms