RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 MYBL1P10243 752 aa16.93■□□□□ 0.3
VARS2-212ENST00000542001 QPCTQ16769 361 aa16.93■□□□□ 0.3
VARS2-212ENST00000542001 ANO5Q75V66 913 aa16.93■□□□□ 0.3
VARS2-212ENST00000542001 RUBCNQ92622 972 aa16.93■□□□□ 0.3
VARS2-212ENST00000542001 COPS5Q92905 334 aa16.93■□□□□ 0.3
VARS2-212ENST00000542001 FAM161BQ96MY7 647 aa16.93■□□□□ 0.3
VARS2-212ENST00000542001 KIF13AQ9H1H9 1805 aa16.93■□□□□ 0.3
VARS2-212ENST00000542001 ARFGEF2Q9Y6D5 1785 aa16.93■□□□□ 0.3
VARS2-212ENST00000542001 CRCPO75575 148 aa16.93■□□□□ 0.3
VARS2-212ENST00000542001 SUPT20HL2P0C7V6 817 aa16.93■□□□□ 0.3
VARS2-212ENST00000542001 RAD23BP54727 409 aa16.93■□□□□ 0.3
VARS2-212ENST00000542001 CCNA1P78396 465 aa16.93■□□□□ 0.3
VARS2-212ENST00000542001 SURF1Q15526 300 aa16.93■□□□□ 0.3
VARS2-212ENST00000542001 CLEC16AQ2KHT3 1053 aa16.93■□□□□ 0.3
VARS2-212ENST00000542001 ACOT1Q86TX2 421 aa16.93■□□□□ 0.3
VARS2-212ENST00000542001 NUDCD1Q96RS6 583 aa16.93■□□□□ 0.3
VARS2-212ENST00000542001 P4HA2O15460 535 aa16.93■□□□□ 0.3
VARS2-212ENST00000542001 CHKAP35790 457 aa16.93■□□□□ 0.3
VARS2-212ENST00000542001 FMO1Q01740 532 aa16.93■□□□□ 0.3
VARS2-212ENST00000542001 CAV1Q03135 178 aa16.93■□□□□ 0.3
VARS2-212ENST00000542001 KIZQ2M2Z5 673 aa16.93■□□□□ 0.3
VARS2-212ENST00000542001 PID1Q7Z2X4 250 aa16.93■□□□□ 0.3
VARS2-212ENST00000542001 USP33Q8TEY7 942 aa16.93■□□□□ 0.3
VARS2-212ENST00000542001 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.93■□□□□ 0.3
VARS2-212ENST00000542001 FAM167AQ96KS9 214 aa16.93■□□□□ 0.3
VARS2-212ENST00000542001 PCMTD2Q9NV79 361 aa16.93■□□□□ 0.3
VARS2-212ENST00000542001 HAO1Q9UJM8 370 aa16.93■□□□□ 0.3
VARS2-212ENST00000542001 MYH8P13535 1937 aa16.93■□□□□ 0.3
VARS2-212ENST00000542001 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.92■□□□□ 0.3
VARS2-212ENST00000542001 KIAA0391O15091 583 aaKnown RBP16.92■□□□□ 0.3
VARS2-212ENST00000542001 HAUS5O94927 633 aa16.92■□□□□ 0.3
VARS2-212ENST00000542001 CCNE2O96020 404 aa16.92■□□□□ 0.3
VARS2-212ENST00000542001 TNFSF9P41273 254 aa16.92■□□□□ 0.3
VARS2-212ENST00000542001 TATDN1Q6P1N9 297 aa16.92■□□□□ 0.3
VARS2-212ENST00000542001 RNF135Q8IUD6 432 aa16.92■□□□□ 0.3
VARS2-212ENST00000542001 NUDCD3Q8IVD9 361 aa16.92■□□□□ 0.3
VARS2-212ENST00000542001 NOP53Q9NZM5 478 aaKnown RBP16.92■□□□□ 0.3
VARS2-212ENST00000542001 NID2Q14112 1375 aa16.92■□□□□ 0.3
VARS2-212ENST00000542001 A0A0A6YYK5 440 aaPredicted RBP16.92■□□□□ 0.3
VARS2-212ENST00000542001 MYL3P08590 195 aa16.92■□□□□ 0.3
VARS2-212ENST00000542001 MRPS9P82933 396 aaKnown RBP16.92■□□□□ 0.3
VARS2-212ENST00000542001 ZBTB41Q5SVQ8 909 aa16.92■□□□□ 0.3
VARS2-212ENST00000542001 HEATR6Q6AI08 1181 aaKnown RBP16.92■□□□□ 0.3
VARS2-212ENST00000542001 DSTYKQ6XUX3 929 aa16.92■□□□□ 0.3
VARS2-212ENST00000542001 MOB2Q70IA6 237 aa16.92■□□□□ 0.3
VARS2-212ENST00000542001 TMEM161BQ8NDZ6 487 aa16.92■□□□□ 0.3
VARS2-212ENST00000542001 AGBL3Q8NEM8 1001 aa16.92■□□□□ 0.3
VARS2-212ENST00000542001 SCFD2Q8WU76 684 aa16.92■□□□□ 0.3
VARS2-212ENST00000542001 PROSCO94903 275 aa16.92■□□□□ 0.3
VARS2-212ENST00000542001 ACAP3Q96P50 834 aa16.92■□□□□ 0.3
VARS2-212ENST00000542001 FAM111AQ96PZ2 611 aa16.92■□□□□ 0.3
VARS2-212ENST00000542001 ZC3H7BQ9UGR2 993 aaKnown RBP16.92■□□□□ 0.3
VARS2-212ENST00000542001 PIN4Q9Y237 131 aaKnown RBP16.92■□□□□ 0.3
VARS2-212ENST00000542001 OPLAHO14841 1288 aa16.91■□□□□ 0.3
VARS2-212ENST00000542001 ENO1P06733 434 aaKnown RBP16.91■□□□□ 0.3
VARS2-212ENST00000542001 CLK2P49760 499 aaKnown RBP16.91■□□□□ 0.3
VARS2-212ENST00000542001 EFNA5P52803 228 aa16.91■□□□□ 0.3
VARS2-212ENST00000542001 ALDH18A1P54886 795 aaKnown RBP16.91■□□□□ 0.3
VARS2-212ENST00000542001 RANBP17Q9H2T7 1088 aaKnown RBP16.91■□□□□ 0.3
VARS2-212ENST00000542001 HIRAP54198 1017 aaPredicted RBP16.91■□□□□ 0.3
VARS2-212ENST00000542001 BMPR2Q13873 1038 aa16.91■□□□□ 0.3
VARS2-212ENST00000542001 TTC13Q8NBP0 860 aa16.91■□□□□ 0.3
VARS2-212ENST00000542001 HPDLQ96IR7 371 aa16.91■□□□□ 0.3
VARS2-212ENST00000542001 ABCF3Q9NUQ8 709 aa16.91■□□□□ 0.3
VARS2-212ENST00000542001 LOC100653049A0A140TA62 436 aa16.91■□□□□ 0.3
VARS2-212ENST00000542001 KRT34O76011 436 aa16.91■□□□□ 0.3
VARS2-212ENST00000542001 TTC4O95801 387 aa16.91■□□□□ 0.3
VARS2-212ENST00000542001 GSTA1P08263 222 aa16.91■□□□□ 0.3
VARS2-212ENST00000542001 CYP3A4P08684 503 aa16.91■□□□□ 0.3
VARS2-212ENST00000542001 GSTA2P09210 222 aa16.91■□□□□ 0.3
VARS2-212ENST00000542001 PECAM1P16284 738 aaPredicted RBP16.91■□□□□ 0.3
VARS2-212ENST00000542001 FNTAP49354 379 aa16.91■□□□□ 0.3
VARS2-212ENST00000542001 PAN2Q504Q3 1202 aaKnown RBP16.91■□□□□ 0.3
VARS2-212ENST00000542001 APOBEC3FQ8IUX4 373 aaKnown RBP16.91■□□□□ 0.3
VARS2-212ENST00000542001 BSNDQ8WZ55 320 aa16.91■□□□□ 0.3
VARS2-212ENST00000542001 GPRASP2Q96D09 838 aa16.91■□□□□ 0.3
VARS2-212ENST00000542001 R3HDM2Q9Y2K5 976 aaKnown RBP16.91■□□□□ 0.3
VARS2-212ENST00000542001 A0A087WZ62 844 aa16.91■□□□□ 0.3
VARS2-212ENST00000542001 SCN4BQ8IWT1 228 aa16.91■□□□□ 0.3
VARS2-212ENST00000542001 CCNYL1Q8N7R7 359 aa16.91■□□□□ 0.3
VARS2-212ENST00000542001 ASAP3Q8TDY4 903 aa16.91■□□□□ 0.3
VARS2-212ENST00000542001 LENG9Q96B70 501 aa16.91■□□□□ 0.3
VARS2-212ENST00000542001 FDXACB1Q9BRP7 624 aaPredicted RBP16.91■□□□□ 0.3
VARS2-212ENST00000542001 YIPF3Q9GZM5 350 aa16.91■□□□□ 0.3
VARS2-212ENST00000542001 LRRC37A3O60309 1634 aa16.9■□□□□ 0.3
VARS2-212ENST00000542001 SNED1Q8TER0 1413 aa16.9■□□□□ 0.3
VARS2-212ENST00000542001 IGLV3-22A0A075B6J6 115 aa16.9■□□□□ 0.3
VARS2-212ENST00000542001 DDNO94850 711 aaPredicted RBP16.9■□□□□ 0.3
VARS2-212ENST00000542001 EGFRP00533 1210 aa16.9■□□□□ 0.3
VARS2-212ENST00000542001 CREB1P16220 341 aa16.9■□□□□ 0.3
VARS2-212ENST00000542001 TMEM132DQ14C87 1099 aa16.9■□□□□ 0.3
VARS2-212ENST00000542001 RASIP1Q5U651 963 aa16.9■□□□□ 0.3
VARS2-212ENST00000542001 FAM129AQ9BZQ8 928 aa16.9■□□□□ 0.3
VARS2-212ENST00000542001 KIF9Q9HAQ2 790 aa16.9■□□□□ 0.3
VARS2-212ENST00000542001 TSR3Q9UJK0 312 aaKnown RBP16.9■□□□□ 0.3
VARS2-212ENST00000542001 PRRC2BQ5JSZ5 2229 aaKnown RBP16.9■□□□□ 0.3
VARS2-212ENST00000542001 ASPHQ12797 758 aa16.9■□□□□ 0.3
VARS2-212ENST00000542001 PTK7Q13308 1070 aa16.9■□□□□ 0.3
VARS2-212ENST00000542001 SIAH1Q8IUQ4 282 aa16.9■□□□□ 0.3
VARS2-212ENST00000542001 FBXO36Q8NEA4 188 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms